* using log directory ‘/srv/hornik/tmp/CRAN_pretest/difR.Rcheck’
* using R Under development (unstable) (2025-05-22 r88223)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (3)
    Debian flang-new version 19.1.7 (3)
* running under: Debian GNU/Linux 13 (trixie)
* using session charset: UTF-8
* checking for file ‘difR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘difR’ version ‘6.0.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [5s/6s] NOTE
Maintainer: ‘Sebastien Beland <sebastien.beland@umontreal.ca>’

New maintainer:
  Sebastien Beland <sebastien.beland@umontreal.ca>
Old maintainer(s):
  David Magis <david.magis@gmail.com>

Possibly misspelled words in DESCRIPTION:
  difR (11:18)

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘difR’ can be installed ... [11s/11s] WARNING
Found the following significant warnings:
  Warning: replacing previous import ‘VGAM::coef’ by ‘stats::coef’ when loading ‘difR’
  Warning: replacing previous import ‘VGAM::deviance’ by ‘stats::deviance’ when loading ‘difR’
  Warning: replacing previous import ‘VGAM::vcov’ by ‘stats::vcov’ when loading ‘difR’
See ‘/srv/hornik/tmp/CRAN_pretest/difR.Rcheck/00install.out’ for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s/2s] OK
* checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the package can be unloaded cleanly ... [2s/2s] OK
* checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
* checking loading without being on the library search path ... [2s/2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [21s/21s] NOTE
Found if() conditions comparing class() to string:
File ‘difR/R/subtestLogistic.R’: if (class(x) != "genLogistic") ...
Use inherits() (or maybe is()) instead.
* checking Rd files ... [1s/1s] NOTE
checkRd: (-1) difTID.Rd:184: Lost braces
   184 |  \code{\link[deltaPlotR]{deltaPlot}}, code{\link[deltaPlotR]{diagPlot}}, \code{\link{dichoDif}}
       |                                           ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  itemPar1PL.Rd: rasch
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [10s/10s] OK
* checking PDF version of manual ... [5s/5s] OK
* checking HTML version of manual ... [4s/4s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 WARNING, 4 NOTEs