* using log directory 'd:/RCompile/CRANincoming/R-devel/diathor.Rcheck'
* using R Under development (unstable) (2024-09-13 r87147 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'diathor/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'diathor' version '0.1.4'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [13s] NOTE
Maintainer: 'Joaquin Cochero <jcochero@ilpla.edu.ar>'

New maintainer:
  Joaquin Cochero <jcochero@ilpla.edu.ar>
Old maintainer(s):
  Joaquín Cochero <jcochero@ilpla.edu.ar>

Possibly misspelled words in DESCRIPTION:
  href (16:69, 19:49, 21:39, 22:27)

Found the following (possibly) invalid URLs:
  URL: , \url{https://www.bafu.admin.ch/bafu/fr/home/themes/eaux/publications/publications-eaux/methodes-analyse-appreciation-cours-eau-diatomees.html})
    From: man/diathor-package.Rd
    Message: Invalid URI scheme
  URL: \url{https://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=PASCAL8060205402}
    From: man/diathor-package.Rd
    Message: Invalid URI scheme
  URL: \url{https://www.oieau.org/eaudoc/notice/ETUDE-DES-METHODES-BIOLOGIQUES-DAPPRECIATION-QUANTITATIVE-DE-LA-QUALITE-DES-EAUX}
    From: man/diathor-package.Rd
    Message: Invalid URI scheme
  URL: \url{https://www.vliz.be/imisdocs/publications/286641.pdf}
    From: man/diathor-package.Rd
    Message: Invalid URI scheme
  URL: https://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.689.5469&rep=rep1&type=pdf#page=85
    From: man/pbidw.Rd
    Status: 401
    Message: Unauthorized
  URL: https://www.oieau.org/eaudoc/notice/ETUDE-DES-METHODES-BIOLOGIQUES-DAPPRECIATION-QUANTITATIVE-DE-LA-QUALITE-DES-EAUX
    From: DESCRIPTION
          man/ips.Rd
    Status: 404
    Message: Not Found
  URL: https://www.sciencedirect.com/science/article/abs/pii/S1470160X1730420X
    From: man/cemfgs_rb.Rd
    Status: 403
    Message: Forbidden
  URL: https://www.sciencedirect.com/science/article/abs/pii/S1470160X18305478
    From: man/disp.Rd
    Status: 403
    Message: Forbidden
  URL: https://www.sciencedirect.com/science/article/abs/pii/S1470160X18309683
    From: man/spear.Rd
    Status: 403
    Message: Forbidden
  URL: https://www.sciencedirect.com/science/article/abs/pii/S1470160X1930946X
    From: man/diat_sampleData.Rd
    Status: 403
    Message: Forbidden
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'diathor' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... NOTE
File
  LICENSE
is not mentioned in the DESCRIPTION file.
Non-standard files/directories found at top level:
  'CRAN-RELEASE' 'README.MD' 'README.Rmd' 'diathor-package.Rd'
  'sampleData.csv'
* checking for left-over files ... NOTE
The following files look like leftovers:
  'diathor/diathor-package.Rd'
Please remove them from your package.
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... WARNING
'::' or ':::' import not declared from: 'diatbarcode'
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [17s] OK
* checking Rd files ... WARNING
checkRd: (7) diathor-package.Rd:9: Invalid URL: \url{https://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=PASCAL8060205402}
checkRd: (7) diathor-package.Rd:9: Invalid URL: , \url{https://www.bafu.admin.ch/bafu/fr/home/themes/eaux/publications/publications-eaux/methodes-analyse-appreciation-cours-eau-diatomees.html})
checkRd: (7) diathor-package.Rd:9: Invalid URL: \url{https://www.vliz.be/imisdocs/publications/286641.pdf}
checkRd: (7) diathor-package.Rd:9: Invalid URL: \url{https://www.oieau.org/eaudoc/notice/ETUDE-DES-METHODES-BIOLOGIQUES-DAPPRECIATION-QUANTITATIVE-DE-LA-QUALITE-DES-EAUX}
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... [12s] WARNING
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
! LaTeX Error: Unicode character  (U+008D)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
* checking PDF version of manual without index ... ERROR
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR, 3 WARNINGs, 4 NOTEs