downloading reverse dependencies ... downloading agua_0.1.4.tar.gz ... ok downloading autostats_0.4.1.tar.gz ... ok downloading baguette_1.1.0.tar.gz ... ok downloading bonsai_0.4.0.tar.gz ... ok downloading censored_0.3.3.tar.gz ... ok downloading discrim_1.0.1.tar.gz ... ok downloading fastml_0.6.2.tar.gz ... ok downloading finetune_1.2.1.tar.gz ... ok downloading finnts_0.5.0.tar.gz ... ok downloading flipr_0.3.3.tar.gz ... ok downloading healthyR.ai_0.1.1.tar.gz ... ok downloading ldmppr_1.0.4.tar.gz ... ok downloading MachineShop_3.9.0.tar.gz ... ok downloading MLwrap_0.1.0.tar.gz ... ok downloading modeltime_1.3.1.tar.gz ... ok downloading modeltime.resample_0.2.3.tar.gz ... ok downloading rules_1.0.2.tar.gz ... ok downloading tabnet_0.7.0.tar.gz ... ok downloading tdarec_0.2.0.tar.gz ... ok downloading tidyclust_0.2.4.tar.gz ... ok downloading tidydann_1.0.1.tar.gz ... ok downloading tidyfit_0.7.4.tar.gz ... ok downloading tidymodels_1.3.0.tar.gz ... ok downloading tidysdm_1.0.0.tar.gz ... ok downloading tune_1.3.0.tar.gz ... ok downloading viralmodels_1.3.4.tar.gz ... ok downloading embed_1.1.5.tar.gz ... ok downloading healthyR.ts_0.3.1.tar.gz ... ok downloading modeltime.ensemble_1.0.4.tar.gz ... ok downloading parsnip_1.3.2.tar.gz ... ok downloading recipes_1.3.1.tar.gz ... ok downloading shapr_1.0.4.tar.gz ... ok downloading textrecipes_1.1.0.tar.gz ... ok downloading themis_1.0.3.tar.gz ... ok downloading workflows_1.2.0.tar.gz ... ok downloading workflowsets_1.1.1.tar.gz ... ok installing dependencies ‘adabag’, ‘aorsf’, ‘AzureStor’, ‘baguette’, ‘bestglm’, ‘blockCV’, ‘BMS’, ‘bonsai’, ‘BoomSpikeSlab’, ‘Boruta’, ‘BradleyTerry2’, ‘brulee’, ‘bundle’, ‘censored’, ‘corrr’, ‘DALEXtra’, ‘dann’, ‘ddalpha’, ‘dials’, ‘discrim’, ‘fastshap’, ‘finetune’, ‘framecleaner’, ‘future’, ‘gaselect’, ‘GET’, ‘gets’, ‘ggeasy’, ‘ggpattern’, ‘ggstance’, ‘healthyR.ai’, ‘healthyR.data’, ‘hfr’, ‘hts’, ‘innsight’, ‘Microsoft365R’, ‘modeltime’, ‘modeltime.resample’, ‘monomvn’, ‘mRMRe’, ‘MSwM’, ‘naniar’, ‘notebookutils’, ‘ParBayesianOptimization’, ‘pastclim’, ‘plsmod’, ‘presenter’, ‘probably’, ‘rBayesianOptimization’, ‘recosystem’, ‘ripserr’, ‘ROSE’, ‘rsample’, ‘rules’, ‘sda’, ‘sentencepiece’, ‘shrinkTVP’, ‘spacyr’, ‘sparsediscrim’, ‘spatialsample’, ‘stacks’, ‘TDA’, ‘tdaunif’, ‘TDAvec’, ‘thief’, ‘tidyclust’, ‘tidyquant’, ‘tokenizers.bpe’, ‘trelliscopejs’, ‘TSA’, ‘TSrepr’, ‘VBsparsePCA’, ‘viraldomain’, ‘wordpiece’, ‘XICOR’, ‘xrf’ also installing the dependencies ‘ConsRank’, ‘autocogs’, ‘fidelius’, ‘gridpattern’, ‘applicable’, ‘dlr’, ‘piecemaker’, ‘wordpiece.data’ begin installing package ‘ConsRank’ begin installing package ‘autocogs’ begin installing package ‘gridpattern’ begin installing package ‘fidelius’ begin installing package ‘applicable’ begin installing package ‘dlr’ begin installing package ‘piecemaker’ begin installing package ‘wordpiece.data’ begin installing package ‘ggeasy’ begin installing package ‘framecleaner’ begin installing package ‘recosystem’ begin installing package ‘ggstance’ begin installing package ‘XICOR’ begin installing package ‘aorsf’ begin installing package ‘sda’ begin installing package ‘sparsediscrim’ begin installing package ‘plsmod’ begin installing package ‘future’ begin installing package ‘dials’ begin installing package ‘naniar’ begin installing package ‘BradleyTerry2’ begin installing package ‘hts’ begin installing package ‘AzureStor’ begin installing package ‘Boruta’ begin installing package ‘corrr’ begin installing package ‘Microsoft365R’ begin installing package ‘notebookutils’ begin installing package ‘healthyR.data’ * installing *source* package ‘wordpiece.data’ ... ** this is package ‘wordpiece.data’ version ‘2.0.0’ ** package ‘wordpiece.data’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wordpiece.data) begin installing package ‘bundle’ * installing *source* package ‘fidelius’ ... ** this is package ‘fidelius’ version ‘0.0.2’ ** package ‘fidelius’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fidelius) begin installing package ‘GET’ * installing *source* package ‘piecemaker’ ... ** this is package ‘piecemaker’ version ‘1.0.2’ ** package ‘piecemaker’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (piecemaker) begin installing package ‘ParBayesianOptimization’ * installing *source* package ‘Boruta’ ... ** this is package ‘Boruta’ version ‘9.0.0’ ** package ‘Boruta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Boruta) begin installing package ‘rBayesianOptimization’ * installing *source* package ‘sda’ ... ** this is package ‘sda’ version ‘1.3.9’ ** package ‘sda’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sda) begin installing package ‘innsight’ * installing *source* package ‘XICOR’ ... ** this is package ‘XICOR’ version ‘0.4.1’ ** package ‘XICOR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (XICOR) begin installing package ‘fastshap’ * installing *source* package ‘dlr’ ... ** this is package ‘dlr’ version ‘1.0.1’ ** package ‘dlr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dlr) begin installing package ‘brulee’ * installing *source* package ‘framecleaner’ ... ** this is package ‘framecleaner’ version ‘0.2.1’ ** package ‘framecleaner’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (framecleaner) begin installing package ‘TSrepr’ * installing *source* package ‘notebookutils’ ... ** this is package ‘notebookutils’ version ‘1.5.3’ ** package ‘notebookutils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (notebookutils) begin installing package ‘xrf’ * installing *source* package ‘bundle’ ... ** this is package ‘bundle’ version ‘0.1.2’ ** package ‘bundle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bundle) begin installing package ‘ripserr’ * installing *source* package ‘autocogs’ ... ** this is package ‘autocogs’ version ‘0.1.5’ ** package ‘autocogs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (autocogs) begin installing package ‘TDA’ * installing *source* package ‘rBayesianOptimization’ ... ** this is package ‘rBayesianOptimization’ version ‘1.2.1’ ** package ‘rBayesianOptimization’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rBayesianOptimization) begin installing package ‘TDAvec’ * installing *source* package ‘ggeasy’ ... ** this is package ‘ggeasy’ version ‘0.1.6’ ** package ‘ggeasy’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggeasy) begin installing package ‘tdaunif’ * installing *source* package ‘AzureStor’ ... ** this is package ‘AzureStor’ version ‘3.7.0’ ** package ‘AzureStor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AzureStor) begin installing package ‘dann’ * installing *source* package ‘corrr’ ... ** this is package ‘corrr’ version ‘0.4.4’ ** package ‘corrr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (corrr) begin installing package ‘bestglm’ * installing *source* package ‘ggstance’ ... ** this is package ‘ggstance’ version ‘0.3.7’ ** package ‘ggstance’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggstance) begin installing package ‘BMS’ * installing *source* package ‘dials’ ... ** this is package ‘dials’ version ‘1.4.1’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dials) begin installing package ‘BoomSpikeSlab’ * installing *source* package ‘tdaunif’ ... ** this is package ‘tdaunif’ version ‘0.2.0’ ** package ‘tdaunif’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tdaunif) begin installing package ‘gaselect’ * installing *source* package ‘gridpattern’ ... ** this is package ‘gridpattern’ version ‘1.3.1’ ** package ‘gridpattern’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gridpattern) begin installing package ‘gets’ * installing *source* package ‘naniar’ ... ** this is package ‘naniar’ version ‘1.1.0’ ** package ‘naniar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (naniar) begin installing package ‘hfr’ * installing *source* package ‘ConsRank’ ... ** this is package ‘ConsRank’ version ‘2.1.5’ ** package ‘ConsRank’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ConsRank) begin installing package ‘monomvn’ * installing *source* package ‘sparsediscrim’ ... ** this is package ‘sparsediscrim’ version ‘0.3.0’ ** package ‘sparsediscrim’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sparsediscrim) begin installing package ‘mRMRe’ * installing *source* package ‘ParBayesianOptimization’ ... ** this is package ‘ParBayesianOptimization’ version ‘1.2.6’ ** package ‘ParBayesianOptimization’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ParBayesianOptimization) begin installing package ‘MSwM’ * installing *source* package ‘BradleyTerry2’ ... ** this is package ‘BradleyTerry2’ version ‘1.1.3’ ** package ‘BradleyTerry2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BradleyTerry2) begin installing package ‘shrinkTVP’ * installing *source* package ‘plsmod’ ... ** this is package ‘plsmod’ version ‘1.0.0’ ** package ‘plsmod’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plsmod) begin installing package ‘blockCV’ * installing *source* package ‘applicable’ ... ** this is package ‘applicable’ version ‘0.1.1’ ** package ‘applicable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (applicable) begin installing package ‘pastclim’ * installing *source* package ‘xrf’ ... ** this is package ‘xrf’ version ‘0.2.2’ ** package ‘xrf’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xrf) begin installing package ‘VBsparsePCA’ * installing *source* package ‘future’ ... ** this is package ‘future’ version ‘1.67.0’ ** package ‘future’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (future) begin installing package ‘TSA’ * installing *source* package ‘hfr’ ... ** this is package ‘hfr’ version ‘0.7.1’ ** package ‘hfr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hfr) begin installing package ‘ddalpha’ * installing *source* package ‘GET’ ... ** this is package ‘GET’ version ‘1.0-7’ ** package ‘GET’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GET) begin installing package ‘sentencepiece’ * installing *source* package ‘VBsparsePCA’ ... ** this is package ‘VBsparsePCA’ version ‘0.1.0’ ** package ‘VBsparsePCA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (VBsparsePCA) begin installing package ‘spacyr’ * installing *source* package ‘bestglm’ ... ** this is package ‘bestglm’ version ‘0.37.3’ ** package ‘bestglm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bestglm) begin installing package ‘tokenizers.bpe’ * installing *source* package ‘brulee’ ... ** this is package ‘brulee’ version ‘0.5.0’ ** package ‘brulee’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (brulee) begin installing package ‘ROSE’ * installing *source* package ‘BMS’ ... ** this is package ‘BMS’ version ‘0.3.5’ ** package ‘BMS’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BMS) begin installing package ‘presenter’ * installing *source* package ‘Microsoft365R’ ... ** this is package ‘Microsoft365R’ version ‘2.4.1’ ** package ‘Microsoft365R’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Microsoft365R) begin installing package ‘bonsai’ * installing *source* package ‘spacyr’ ... ** this is package ‘spacyr’ version ‘1.3.0’ ** package ‘spacyr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spacyr) begin installing package ‘discrim’ * installing *source* package ‘ROSE’ ... ** this is package ‘ROSE’ version ‘0.0-4’ ** package ‘ROSE’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ROSE) begin installing package ‘rules’ * installing *source* package ‘presenter’ ... ** this is package ‘presenter’ version ‘0.1.2’ ** package ‘presenter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (presenter) begin installing package ‘adabag’ * installing *source* package ‘MSwM’ ... ** this is package ‘MSwM’ version ‘1.5’ ** package ‘MSwM’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MSwM) begin installing package ‘censored’ * installing *source* package ‘gets’ ... ** this is package ‘gets’ version ‘0.38’ ** package ‘gets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gets) begin installing package ‘trelliscopejs’ * installing *source* package ‘mRMRe’ ... ** this is package ‘mRMRe’ version ‘2.1.2.2’ ** package ‘mRMRe’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpsXpLja/R.INSTALL311389427844ec/mRMRe/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Data.cpp -o Data.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Filter.cpp -o Filter.o Filter.cpp: In member function ‘const void Filter::placeElements(unsigned int, unsigned int, unsigned int)’: Filter.cpp:198:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 198 | for (int j = 0; j < mFixedFeatureCount; ++j) | ~~^~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Math.cpp -o Math.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Matrix.cpp -o Matrix.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c MutualInformationMatrix.cpp -o MutualInformationMatrix.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c exports.cpp -o exports.o exports.cpp: In function ‘SEXPREC* export_concordance_index(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: exports.cpp:55:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 55 | for (unsigned int i = 0; i < INTEGER(sampleStratumCount)[0]; ++i) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ exports.cpp: In function ‘SEXPREC* export_filters(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: exports.cpp:80:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 80 | for (unsigned int i = 0; i < LENGTH(childrenCountPerLevel); ++i) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ exports.cpp:92:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 92 | for (unsigned int i = 0; i < LENGTH(targetFeatureIndices); ++i) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ exports.cpp:105:36: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 105 | for (unsigned int k = 0; k < INTEGER(featureCount)[0]; ++k) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ exports.cpp: In function ‘SEXPREC* export_filters_bootstrap(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: exports.cpp:153:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 153 | for (unsigned int i = 0; i < LENGTH(targetFeatureIndices); ++i) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ exports.cpp:159:36: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 159 | for (unsigned int k = 0; k < INTEGER(featureCount)[0]; ++k) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ exports.cpp:168:36: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 168 | for (unsigned int j = 0; j < LENGTH(targetFeatureIndices); ++j) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o mRMRe.so Data.o Filter.o Math.o Matrix.o MutualInformationMatrix.o exports.o -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpsXpLja/R.INSTALL311389427844ec/mRMRe/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-mRMRe/00new/mRMRe/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mRMRe) begin installing package ‘ggpattern’ * installing *source* package ‘monomvn’ ... ** this is package ‘monomvn’ version ‘1.9-21’ ** package ‘monomvn’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzvNrBt/R.INSTALL31132b328a7ddb/monomvn/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -pedantic -mtune=native -c blasso.cc -o blasso.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -pedantic -mtune=native -c bmonomvn.cc -o bmonomvn.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hshoe.c -o hshoe.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linalg.c -o linalg.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matrix.c -o matrix.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c monomvn_init.c -o monomvn_init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nu.c -o nu.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rgig.c -o rgig.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rhelp.c -o rhelp.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c solve.QP.f -o solve.QP.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -pedantic -mtune=native -c ustructs.cc -o ustructs.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c util.f -o util.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o monomvn.so blasso.o bmonomvn.o hshoe.o linalg.o matrix.o monomvn_init.o nu.o rgig.o rhelp.o solve.QP.o ustructs.o util.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzvNrBt/R.INSTALL31132b328a7ddb/monomvn/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-monomvn/00new/monomvn/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (monomvn) begin installing package ‘viraldomain’ * installing *source* package ‘healthyR.data’ ... ** this is package ‘healthyR.data’ version ‘1.2.0’ ** package ‘healthyR.data’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (healthyR.data) begin installing package ‘wordpiece’ * installing *source* package ‘blockCV’ ... ** this is package ‘blockCV’ version ‘3.1-6’ ** package ‘blockCV’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyoyTpk/R.INSTALL311693309373b7/blockCV/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nndm.cpp -o nndm.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o blockCV.so RcppExports.o nndm.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyoyTpk/R.INSTALL311693309373b7/blockCV/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-blockCV/00new/blockCV/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (blockCV) begin installing package ‘rsample’ * installing *source* package ‘fastshap’ ... ** this is package ‘fastshap’ version ‘0.1.1’ ** package ‘fastshap’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaTKk0z/R.INSTALL310cf059b81966/fastshap/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DARMA_DONT_USE_OPENMP -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DARMA_DONT_USE_OPENMP -fpic -g -O2 -Wall -pedantic -mtune=native -c fastshap.cpp -o fastshap.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fastshap.so RcppExports.o fastshap.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaTKk0z/R.INSTALL310cf059b81966/fastshap/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fastshap/00new/fastshap/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastshap) begin installing package ‘DALEXtra’ * installing *source* package ‘TSA’ ... ** this is package ‘TSA’ version ‘1.3.1’ ** package ‘TSA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TSA) * installing *source* package ‘wordpiece’ ... ** this is package ‘wordpiece’ version ‘2.1.3’ ** package ‘wordpiece’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wordpiece) * installing *source* package ‘rules’ ... ** this is package ‘rules’ version ‘1.0.2’ ** package ‘rules’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rules) * installing *source* package ‘discrim’ ... ** this is package ‘discrim’ version ‘1.0.1’ ** package ‘discrim’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (discrim) * installing *source* package ‘bonsai’ ... ** this is package ‘bonsai’ version ‘0.4.0’ ** package ‘bonsai’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bonsai) * installing *source* package ‘viraldomain’ ... ** this is package ‘viraldomain’ version ‘0.0.7’ ** package ‘viraldomain’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (viraldomain) * installing *source* package ‘hts’ ... ** this is package ‘hts’ version ‘6.0.3’ ** package ‘hts’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfUuUsm/R.INSTALL3109ce497e93ab/hts/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ RcppExports.cpp:22:39: required from here 22 | rcpp_result_gen = Rcpp::wrap(cgm_c(As, bs)); | ~~~~~^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ RcppExports.cpp:22:39: required from here 22 | rcpp_result_gen = Rcpp::wrap(cgm_c(As, bs)); | ~~~~~^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cgm_RcppEigen.cpp -o cgm_RcppEigen.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from cgm_RcppEigen.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ cgm_RcppEigen.cpp:20:39: required from here 20 | Eigen::MatrixXd cgm_c(SEXP As, SEXP bs) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ cgm_RcppEigen.cpp:20:39: required from here 20 | Eigen::MatrixXd cgm_c(SEXP As, SEXP bs) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase, 0, Eigen::Stride<0, 0> > >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase, 0, Eigen::Stride<0, 0> > >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from ‘class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 0>’ 50 | class SparseMapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:148:7: required from ‘class Eigen::SparseMapBase, 0, Eigen::Stride<0, 0> >, 1>’ 148 | class SparseMapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:222:7: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ 222 | class Map, Options, StrideType> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/MappedSparseMatrix.h:32:7: required from ‘class Eigen::MappedSparseMatrix’ 32 | class MappedSparseMatrix | ^~~~~~~~~~~~~~~~~~ cgm_RcppEigen.cpp:21:16: required from here 21 | const MSpMat A = as(As); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>’ 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ 94 | template class Map | ^~~ cgm_RcppEigen.cpp:23:25: required from here 23 | const Map b(as > (bs)); | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase, 0, Eigen::OuterStride<> > >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase, 0, Eigen::OuterStride<> > >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from ‘class Eigen::SparseMapBase, 0, Eigen::OuterStride<> >, 0>’ 50 | class SparseMapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:83:34: required from ‘class Eigen::internal::SparseRefBase, 0, Eigen::OuterStride<> > >’ 83 | template class SparseRefBase | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from ‘class Eigen::Ref, 0, Eigen::OuterStride<> >’ 177 | class Ref, Options, StrideType> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:37:41: required from ‘struct Eigen::internal::is_ref_compatible_impl >’ 37 | enum { value = sizeof(test(ms_from, 0))==sizeof(yes) }; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:43:81: required from ‘struct Eigen::internal::is_ref_compatible >’ 43 | enum { value = is_ref_compatible_impl::type>::value }; | ^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:46:49: required from ‘class Eigen::IterativeSolverBase > >’ 46 | template::value> | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from ‘class Eigen::ConjugateGradient >’ 158 | class ConjugateGradient : public IterativeSolverBase > | ^~~~~~~~~~~~~~~~~ cgm_RcppEigen.cpp:24:44: required from here 24 | ConjugateGradient > cg; | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h:41:43: required from ‘class Eigen::DiagonalPreconditioner’ 41 | typedef typename Vector::StorageIndex StorageIndex; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:431:18: required from ‘class Eigen::IterativeSolverBase > >’ 431 | Preconditioner m_preconditioner; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:158:7: required from ‘class Eigen::ConjugateGradient >’ 158 | class ConjugateGradient : public IterativeSolverBase > | ^~~~~~~~~~~~~~~~~ cgm_RcppEigen.cpp:24:44: required from here 24 | ConjugateGradient > cg; | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl >, Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ cgm_RcppEigen.cpp:28:33: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > > >’ 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:282:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> > >’ 282 | struct evaluator, Options, StrideType> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:687:97: required from ‘Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Map, 0, Eigen::Stride<0, 0> >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ 687 | const bool needToTranspose = (Flags & RowMajorBit) != (internal::evaluator::Flags & RowMajorBit); | ^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:217:9: required from ‘void Eigen::Ref, _Options, _StrideType>::construct(const Expression&, Eigen::internal::true_type) [with Expression = Eigen::Map, 0, Eigen::Stride<0, 0> >; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’ 217 | ::new (obj) TPlainObjectType(expr); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:190:16: required from ‘Eigen::Ref, _Options, _StrideType>::Ref(const Eigen::SparseMatrixBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’ 190 | construct(expr.derived(), typename Traits::template match::type()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:81:5: required from ‘void Eigen::internal::generic_matrix_wrapper::grab(const Eigen::EigenBase&) [with MatrixDerived = Eigen::Map, 0, Eigen::Stride<0, 0> >; MatrixType = Eigen::SparseMatrix]’ 81 | ::new (&m_matrix) Ref(mat.derived()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:427:25: required from ‘void Eigen::IterativeSolverBase::grab(const InputType&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Derived = Eigen::ConjugateGradient >]’ 427 | m_matrixWrapper.grab(A); | ~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:240:9: required from ‘Derived& Eigen::IterativeSolverBase::compute(const Eigen::EigenBase&) [with MatrixDerived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Derived = Eigen::ConjugateGradient >]’ 240 | grab(A.derived()); | ~~~~^~~~~~~~~~~~~ cgm_RcppEigen.cpp:28:24: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:347:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Scalar = double]’ 347 | return derived() = Constant(rows(), cols(), val); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:548:10: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:43:35: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>, const Eigen::Product, 0, Eigen::OuterStride<> >, 1>, Eigen::Block, -1, 1, true>, 0> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:43:29: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::SparseSelfAdjointView, 0, Eigen::OuterStride<> >, 1>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::DiagonalPreconditioner; Eigen::Index = long int; typename Dest::RealScalar = double]’ 43 | VectorType residual = rhs - mat * x; //initial residual | ~~~~^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:219:33: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, Eigen::Matrix, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, Eigen::Matrix >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:64:20: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::SparseSelfAdjointView, 0, Eigen::OuterStride<> >, 1>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::DiagonalPreconditioner; Eigen::Index = long int; typename Dest::RealScalar = double]’ 64 | p = precond.solve(residual); // initial search direction | ~~~~~~~~~~~~~^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:219:33: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1>, Eigen::Matrix, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1>, Eigen::Matrix, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1>, Eigen::Matrix, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> >, 1>, Eigen::Matrix, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::OuterStride<> >, 1>, Eigen::Matrix, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::OuterStride<> >, 1>, Eigen::Matrix, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:71:25: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ 38 | >::type Scalar; | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:74:16: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::SparseSelfAdjointView, 0, Eigen::OuterStride<> >, 1>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::DiagonalPreconditioner; Eigen::Index = long int; typename Dest::RealScalar = double]’ 74 | x += alpha * p; // update solution | ~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:219:33: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:86:11: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::SparseSelfAdjointView, 0, Eigen::OuterStride<> >, 1>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::DiagonalPreconditioner; Eigen::Index = long int; typename Dest::RealScalar = double]’ 86 | p = z + beta * p; // update search direction | ~~^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:219:33: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator > >’ 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1505:8: required from ‘struct Eigen::internal::evaluator >’ 1505 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:79:45: required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ 79 | const bool transpose = (DstEvaluatorType::Flags & RowMajorBit) != (SrcEvaluatorType::Flags & RowMajorBit); | ^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Functor = Eigen::internal::assign_op; typename DstXprType::Scalar = double; typename SrcXprType::Scalar = double]’ 132 | assign_sparse_to_sparse(dst.derived(), src.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:38:16: required from ‘Derived& Eigen::SparseMatrixBase::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Derived = Eigen::SparseMatrix]’ 37 | internal::Assignment > | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 | ::run(derived(), other.derived(), internal::assign_op()); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1239:27: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:217:9: required from ‘void Eigen::Ref, _Options, _StrideType>::construct(const Expression&, Eigen::internal::true_type) [with Expression = Eigen::Map, 0, Eigen::Stride<0, 0> >; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’ 217 | ::new (obj) TPlainObjectType(expr); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:190:16: required from ‘Eigen::Ref, _Options, _StrideType>::Ref(const Eigen::SparseMatrixBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]’ 190 | construct(expr.derived(), typename Traits::template match::type()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:81:5: required from ‘void Eigen::internal::generic_matrix_wrapper::grab(const Eigen::EigenBase&) [with MatrixDerived = Eigen::Map, 0, Eigen::Stride<0, 0> >; MatrixType = Eigen::SparseMatrix]’ 81 | ::new (&m_matrix) Ref(mat.derived()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:427:25: required from ‘void Eigen::IterativeSolverBase::grab(const InputType&) [with InputType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Derived = Eigen::ConjugateGradient >]’ 427 | m_matrixWrapper.grab(A); | ~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:240:9: required from ‘Derived& Eigen::IterativeSolverBase::compute(const Eigen::EigenBase&) [with MatrixDerived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Derived = Eigen::ConjugateGradient >]’ 240 | grab(A.derived()); | ~~~~^~~~~~~~~~~~~ cgm_RcppEigen.cpp:28:24: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:45:40: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:55:50: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:347:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Block, -1, 1, true>; Scalar = double]’ 347 | return derived() = Constant(rows(), cols(), val); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:548:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Block, -1, 1, true>]’ 548 | return setConstant(Scalar(0)); | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:48:14: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:37:44: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::Matrix; bool NeedToTranspose = false; ResScalar = double]’ 37 | return a.template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:277: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >; Eigen::Index = long int]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:45:40: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::SparseSelfAdjointView, 0, Eigen::OuterStride<> >, 1>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::DiagonalPreconditioner; Eigen::Index = long int; typename Dest::RealScalar = double]’ 45 | RealScalar rhsNorm2 = rhs.squaredNorm(); | ~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:219:33: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Eigen::Index = long int]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Matrix >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Matrix > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Matrix; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:55:50: required from ‘void Eigen::internal::conjugate_gradient(const MatrixType&, const Rhs&, Dest&, const Preconditioner&, Eigen::Index&, typename Dest::RealScalar&) [with MatrixType = Eigen::SparseSelfAdjointView, 0, Eigen::OuterStride<> >, 1>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>; Dest = Eigen::Block, -1, 1, true>; Preconditioner = Eigen::DiagonalPreconditioner; Eigen::Index = long int; typename Dest::RealScalar = double]’ 55 | RealScalar residualNorm2 = residual.squaredNorm(); | ~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:219:33: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Functor = add_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Functor = Eigen::internal::add_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Func = add_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Func = add_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:177:18: required from ‘Derived& Eigen::MatrixBase::operator+=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >; Derived = Eigen::Block, -1, 1, true>]’ 177 | call_assignment(derived(), other.derived(), internal::add_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:74:7: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; Eigen::Index = long int]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Matrix, const Eigen::Matrix > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:37:51: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Matrix; U = Eigen::Matrix; bool NeedToTranspose = false; ResScalar = double]’ 37 | return a.template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType Eigen::MatrixBase::dot(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; Derived = Eigen::Matrix; typename Eigen::ScalarBinaryOpTraits::Scalar, typename Eigen::internal::traits::Scalar>::ReturnType = double; typename Eigen::internal::traits::Scalar = double; typename Eigen::internal::traits::Scalar = double]’ 84 | return internal::dot_nocheck::run(*this, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:67:48: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:336:80: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> > > >’ 336 | typedef typename DenseCoeffsBase::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:364:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> > >’ 364 | struct evaluator, Options, StrideType> > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseUtil.h:121:8: required from ‘struct Eigen::internal::plain_object_eval, 0, Eigen::OuterStride<> >, Eigen::Sparse>’ 121 | struct plain_object_eval | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseSelfAdjointView.h:351:53: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const LhsView&, const Rhs&, const typename Dest::Scalar&) [with Dest = Eigen::Matrix; LhsView = Eigen::SparseSelfAdjointView, 0, Eigen::OuterStride<> >, 1>; Rhs = Eigen::Matrix; int ProductType = 7; typename Dest::Scalar = double]’ 351 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix; Lhs = Eigen::SparseSelfAdjointView, 0, Eigen::OuterStride<> >, 1>; Rhs = Eigen::Matrix; Derived = Eigen::internal::generic_product_impl, 0, Eigen::OuterStride<> >, 1>, Eigen::Matrix, Eigen::internal::SparseSelfAdjointShape, Eigen::DenseShape, 7>; Scalar = double]’ 361 | { Derived::scaleAndAddTo(dst,lhs,rhs,alpha); } | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase > >’ 39 | template class ArrayBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper >’ 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h:91:26: required from ‘void Eigen::DiagonalPreconditioner<_Scalar>::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; _Scalar = double]’ 91 | x = m_invdiag.array() * b.array() ; | ~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > > >’ 39 | template class ArrayBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::ArrayWrapper > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h:91:29: required from ‘void Eigen::DiagonalPreconditioner<_Scalar>::_solve_impl(const Rhs&, Dest&) const [with Rhs = Eigen::Matrix; Dest = Eigen::Matrix; _Scalar = double]’ 91 | x = m_invdiag.array() * b.array() ; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::ConjugateGradient >; RhsType = Eigen::Map, 0, Eigen::Stride<0, 0> >; Scalar = double; SrcXprType = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >]’ 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; Derived = Eigen::Matrix]’ 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve >, Eigen::Map, 0, Eigen::Stride<0, 0> > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ 423 | : Base(other.derived()) | ^ cgm_RcppEigen.cpp:28:35: required from here 28 | MatrixXd x=cg.compute(A).solve(b); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o hts.so RcppExports.o cgm_RcppEigen.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfUuUsm/R.INSTALL3109ce497e93ab/hts/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-hts/00new/hts/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hts) begin installing package ‘thief’ * installing *source* package ‘dann’ ... ** this is package ‘dann’ version ‘1.0.2’ ** package ‘dann’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpG5OvGW/R.INSTALL310fda34c8029e/dann/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c internal_armadillo_helpers.cpp -o internal_armadillo_helpers.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c internal_helpers_C.cpp -o internal_helpers_C.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o dann.so RcppExports.o internal_armadillo_helpers.o internal_helpers_C.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpG5OvGW/R.INSTALL310fda34c8029e/dann/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-dann/00new/dann/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dann) * installing *source* package ‘innsight’ ... ** this is package ‘innsight’ version ‘0.3.2’ ** package ‘innsight’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (innsight) * installing *source* package ‘DALEXtra’ ... ** this is package ‘DALEXtra’ version ‘2.3.0’ ** package ‘DALEXtra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DALEXtra) * installing *source* package ‘ggpattern’ ... ** this is package ‘ggpattern’ version ‘1.1.4’ ** package ‘ggpattern’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggpattern) * installing *source* package ‘trelliscopejs’ ... ** this is package ‘trelliscopejs’ version ‘0.2.11’ ** package ‘trelliscopejs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (trelliscopejs) * installing *source* package ‘rsample’ ... ** this is package ‘rsample’ version ‘1.3.1’ ** package ‘rsample’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rsample) begin installing package ‘probably’ begin installing package ‘tidyquant’ begin installing package ‘baguette’ begin installing package ‘finetune’ begin installing package ‘modeltime’ begin installing package ‘spatialsample’ begin installing package ‘stacks’ begin installing package ‘tidyclust’ * installing *source* package ‘thief’ ... ** this is package ‘thief’ version ‘0.3’ ** package ‘thief’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (thief) * installing *source* package ‘censored’ ... ** this is package ‘censored’ version ‘0.3.3’ ** package ‘censored’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (censored) * installing *source* package ‘adabag’ ... ** this is package ‘adabag’ version ‘5.1’ ** package ‘adabag’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (adabag) * installing *source* package ‘pastclim’ ... ** this is package ‘pastclim’ version ‘2.2.0’ ** package ‘pastclim’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pastclim) * installing *source* package ‘ripserr’ ... ** this is package ‘ripserr’ version ‘1.0.0’ ** package ‘ripserr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpj6mDKG/R.INSTALL310eb6484fd346/ripserr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cubical_2dim.cpp -o cubical_2dim.o cubical_2dim.cpp: In member function ‘void ComputePairs2::compute_pairs_main()’: cubical_2dim.cpp:528:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 528 | for (int i = 0; i < ctl_size; ++i) | ~~^~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cubical_3dim.cpp -o cubical_3dim.o cubical_3dim.cpp: In constructor ‘ColumnsToReduce3::ColumnsToReduce3(DenseCubicalGrids3*)’: cubical_3dim.cpp:394:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 394 | for (int y = ay; y > 0; --y) | ^~~ cubical_3dim.cpp:401:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 401 | sort(columns_to_reduce.begin(), columns_to_reduce.end(), BirthdayIndex3Comparator()); | ^~~~ cubical_3dim.cpp: In member function ‘void ComputePairs3::compute_pairs_main()’: cubical_3dim.cpp:804:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 804 | for(int i = 0; i < ctl_size; ++i) { | ~~^~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cubical_4dim.cpp -o cubical_4dim.o cubical_4dim.cpp: In member function ‘void ComputePairs4::compute_pairs_main()’: cubical_4dim.cpp:1045:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1045 | for(int i = 0; i < ctl_size; ++i) { | ~~^~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ripser.cpp -o ripser.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o ripserr.so RcppExports.o cubical_2dim.o cubical_3dim.o cubical_4dim.o ripser.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpj6mDKG/R.INSTALL310eb6484fd346/ripserr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ripserr/00new/ripserr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ripserr) * installing *source* package ‘recosystem’ ... ** this is package ‘recosystem’ version ‘0.5.1’ ** package ‘recosystem’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpkoEGPs/R.INSTALL31099b1c8d4b46/recosystem/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c mf.cpp -o mf.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c reco-output.cpp -o reco-output.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c reco-predict.cpp -o reco-predict.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c reco-read-data.cpp -o reco-read-data.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c reco-train.cpp -o reco-train.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c reco-tune.cpp -o reco-tune.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register_routines.c -o register_routines.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o recosystem.so mf.o reco-output.o reco-predict.o reco-read-data.o reco-train.o reco-tune.o register_routines.o -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpkoEGPs/R.INSTALL31099b1c8d4b46/recosystem/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-recosystem/00new/recosystem/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (recosystem) * installing *source* package ‘TSrepr’ ... ** this is package ‘TSrepr’ version ‘1.1.0’ ** package ‘TSrepr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpkVDDOk/R.INSTALL310d363a25e782/TSrepr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c FeatureClippingTrending.cpp -o FeatureClippingTrending.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c helpers.cpp -o helpers.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c measures.cpp -o measures.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c normalizations.cpp -o normalizations.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c reprsClassical.cpp -o reprsClassical.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rle.cpp -o rle.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o TSrepr.so FeatureClippingTrending.o RcppExports.o helpers.o measures.o normalizations.o reprsClassical.o rle.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpkVDDOk/R.INSTALL310d363a25e782/TSrepr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-TSrepr/00new/TSrepr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TSrepr) * installing *source* package ‘tidyquant’ ... ** this is package ‘tidyquant’ version ‘1.0.11’ ** package ‘tidyquant’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyquant) * installing *source* package ‘baguette’ ... ** this is package ‘baguette’ version ‘1.1.0’ ** package ‘baguette’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (baguette) * installing *source* package ‘stacks’ ... ** this is package ‘stacks’ version ‘1.1.1’ ** package ‘stacks’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stacks) * installing *source* package ‘finetune’ ... ** this is package ‘finetune’ version ‘1.2.1’ ** package ‘finetune’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (finetune) * installing *source* package ‘BoomSpikeSlab’ ... ** this is package ‘BoomSpikeSlab’ version ‘1.2.6’ ** package ‘BoomSpikeSlab’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZLCL0P/R.INSTALL3110d45afbdd46/BoomSpikeSlab/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c boom_spike_slab_init.cc -o boom_spike_slab_init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c logit_spike_slab_wrapper.cc -o logit_spike_slab_wrapper.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:31, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitAuxmixSampler.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitSpikeSlabSampler.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitCompositeSpikeSlabSampler.hpp:22, from logit_spike_slab_wrapper.cc:17: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp: In member function ‘int BOOM::ParallelLatentDataImputer::number_of_observations_managed() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:218:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 218 | for (int i = 0; i < workers_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from logit_spike_slab_wrapper.cc:14: utils.h: In instantiation of ‘void BOOM::spikeslab::InitializeCoefficients(const BOOM::Vector&, const BOOM::Vector&, BOOM::Ptr, BOOM::Ptr) [with SAMPLER = BOOM::BinomialLogitCompositeSpikeSlabSampler]’: logit_spike_slab_wrapper.cc:95:46: required from here 95 | BOOM::spikeslab::InitializeCoefficients( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 96 | BOOM::ToBoomVector(r_beta0), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 | prior.prior_inclusion_probabilities(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 | model, | ~~~~~~ 99 | sampler); | ~~~~~~~~ utils.h:35:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 35 | for (int i = 0; i < initial_beta.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mlm_spike_slab_wrapper.cc -o mlm_spike_slab_wrapper.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:31, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/MLVS_data_imputer.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/MLVS.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/MultinomialLogitCompositeSpikeSlabSampler.hpp:24, from mlm_spike_slab_wrapper.cc:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp: In member function ‘int BOOM::ParallelLatentDataImputer::number_of_observations_managed() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:218:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 218 | for (int i = 0; i < workers_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nested_regression_wrapper.cc -o nested_regression_wrapper.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nnet_wrapper.cc -o nnet_wrapper.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Nnet/GaussianFeedForwardNeuralNetwork.hpp:21, from nnet_wrapper.cc:3: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Nnet/Nnet.hpp: In function ‘void BOOM::Nnet::to_binary(const BOOM::Vector&, std::vector&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Nnet/Nnet.hpp:40:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | for (int i = 0; i < numeric.size(); ++i) { | ~~^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:31, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitAuxmixSampler.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitSpikeSlabSampler.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/BinomialLogitCompositeSpikeSlabSampler.hpp:22, from nnet_wrapper.cc:11: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp: In member function ‘int BOOM::ParallelLatentDataImputer::number_of_observations_managed() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:218:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 218 | for (int i = 0; i < workers_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c poisson_spike_slab_wrapper.cc -o poisson_spike_slab_wrapper.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:31, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/PoissonRegressionAuxMixSampler.hpp:30, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/PoissonRegressionSpikeSlabSampler.hpp:24, from poisson_spike_slab_wrapper.cc:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp: In member function ‘int BOOM::ParallelLatentDataImputer::number_of_observations_managed() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:218:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 218 | for (int i = 0; i < workers_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from poisson_spike_slab_wrapper.cc:16: utils.h: In instantiation of ‘void BOOM::spikeslab::InitializeCoefficients(const BOOM::Vector&, const BOOM::Vector&, BOOM::Ptr, BOOM::Ptr) [with SAMPLER = BOOM::PoissonRegressionSpikeSlabSampler]’: poisson_spike_slab_wrapper.cc:55:44: required from here 55 | BOOM::spikeslab::InitializeCoefficients( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 56 | ToBoomVector(r_initial_beta), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 | prior_spec.spike()->prior_inclusion_probabilities(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 | model, | ~~~~~~ 59 | sampler); | ~~~~~~~~ utils.h:35:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 35 | for (int i = 0; i < initial_beta.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c probit_spike_slab_wrapper.cc -o probit_spike_slab_wrapper.o In file included from probit_spike_slab_wrapper.cc:14: utils.h: In instantiation of ‘void BOOM::spikeslab::InitializeCoefficients(const BOOM::Vector&, const BOOM::Vector&, BOOM::Ptr, BOOM::Ptr) [with SAMPLER = BOOM::BinomialProbitCompositeSpikeSlabSampler]’: probit_spike_slab_wrapper.cc:80:46: required from here 80 | BOOM::spikeslab::InitializeCoefficients( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 81 | BOOM::ToBoomVector(r_beta0), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 | prior.prior_inclusion_probabilities(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 | model, | ~~~~~~ 84 | sampler); | ~~~~~~~~ utils.h:35:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 35 | for (int i = 0; i < initial_beta.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c quantile_spike_wrapper.cc -o quantile_spike_wrapper.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:31, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/Glm/PosteriorSamplers/QuantileRegressionPosteriorSampler.hpp:28, from quantile_spike_wrapper.cc:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp: In member function ‘int BOOM::ThreadWorkerPool::number_of_joinable_threads() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/cpputil/ThreadTools.hpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < threads_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp: In member function ‘int BOOM::ParallelLatentDataImputer::number_of_observations_managed() const’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include/Models/PosteriorSamplers/Imputer.hpp:218:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 218 | for (int i = 0; i < workers_.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~ In file included from quantile_spike_wrapper.cc:13: utils.h: In instantiation of ‘void BOOM::spikeslab::InitializeCoefficients(const BOOM::Vector&, const BOOM::Vector&, BOOM::Ptr, BOOM::Ptr) [with SAMPLER = BOOM::QuantileRegressionSpikeSlabSampler]’: quantile_spike_wrapper.cc:50:44: required from here 50 | BOOM::spikeslab::InitializeCoefficients( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 51 | ToBoomVector(r_initial_beta), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 52 | prior_spec.spike()->prior_inclusion_probabilities(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 53 | model, | ~~~~~~ 54 | sampler); | ~~~~~~~~ utils.h:35:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 35 | for (int i = 0; i < initial_beta.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c shrinkage_regression_wrapper.cc -o shrinkage_regression_wrapper.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spike_slab_wrapper.cc -o spike_slab_wrapper.o In file included from spike_slab_wrapper.cc:23: utils.h: In instantiation of ‘void BOOM::spikeslab::InitializeCoefficients(const BOOM::Vector&, const BOOM::Vector&, BOOM::Ptr, BOOM::Ptr) [with SAMPLER = BOOM::BregVsSampler]’: spike_slab_wrapper.cc:113:48: required from here 113 | BOOM::spikeslab::InitializeCoefficients( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 114 | model->Beta(), | ~~~~~~~~~~~~~~ 115 | prior.spike()->prior_inclusion_probabilities(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 | model, | ~~~~~~ 117 | ssvs_sampler); | ~~~~~~~~~~~~~ utils.h:35:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 35 | for (int i = 0; i < initial_beta.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~ utils.h: In instantiation of ‘void BOOM::spikeslab::InitializeCoefficients(const BOOM::Vector&, const BOOM::Vector&, BOOM::Ptr, BOOM::Ptr) [with SAMPLER = BOOM::AdaptiveSpikeSlabRegressionSampler]’: spike_slab_wrapper.cc:135:48: required from here 135 | BOOM::spikeslab::InitializeCoefficients( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 136 | model->Beta(), | ~~~~~~~~~~~~~~ 137 | prior.spike()->prior_inclusion_probabilities(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 | model, | ~~~~~~ 139 | ssvs_sampler); | ~~~~~~~~~~~~~ utils.h:35:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 35 | for (int i = 0; i < initial_beta.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~ utils.h: In instantiation of ‘void BOOM::spikeslab::InitializeCoefficients(const BOOM::Vector&, const BOOM::Vector&, BOOM::Ptr, BOOM::Ptr) [with SAMPLER = BOOM::SpikeSlabDaRegressionSampler]’: spike_slab_wrapper.cc:157:46: required from here 157 | BOOM::spikeslab::InitializeCoefficients( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 158 | model->Beta(), | ~~~~~~~~~~~~~~ 159 | prior.spike()->prior_inclusion_probabilities(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | model, | ~~~~~~ 161 | oda_sampler); | ~~~~~~~~~~~~ utils.h:35:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 35 | for (int i = 0; i < initial_beta.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I`/home/hornik/tmp/R/bin/Rscript -e "cat(system.file(package='Boom'))"`/include -DADD_ -DR_NO_REMAP -DRLANGUAGE -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c splines.cc -o splines.o splines.cc: In function ‘SEXPREC* boom_spike_slab_Bspline_basis(SEXP, SEXP)’: splines.cc:38:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 38 | for (int i = 0; i < x.size(); ++i) { | ~~^~~~~~~~~~ splines.cc: In function ‘SEXPREC* boom_spike_slab_Mspline_basis(SEXP, SEXP)’: splines.cc:58:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 58 | for (int i = 0; i < x.size(); ++i) { | ~~^~~~~~~~~~ splines.cc: In function ‘SEXPREC* boom_spike_slab_Ispline_basis(SEXP, SEXP)’: splines.cc:77:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 77 | for (int i = 0; i < x.size(); ++i) { | ~~^~~~~~~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o BoomSpikeSlab.so boom_spike_slab_init.o logit_spike_slab_wrapper.o mlm_spike_slab_wrapper.o nested_regression_wrapper.o nnet_wrapper.o poisson_spike_slab_wrapper.o probit_spike_slab_wrapper.o quantile_spike_wrapper.o shrinkage_regression_wrapper.o spike_slab_wrapper.o splines.o /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Boom/lib/libboom.a -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZLCL0P/R.INSTALL3110d45afbdd46/BoomSpikeSlab/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-BoomSpikeSlab/00new/BoomSpikeSlab/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BoomSpikeSlab) * installing *source* package ‘probably’ ... ** this is package ‘probably’ version ‘1.1.0’ ** package ‘probably’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (probably) * installing *source* package ‘tidyclust’ ... ** this is package ‘tidyclust’ version ‘0.2.4’ ** package ‘tidyclust’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyclust) * installing *source* package ‘tokenizers.bpe’ ... ** this is package ‘tokenizers.bpe’ version ‘0.1.3’ ** package ‘tokenizers.bpe’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjzwXte/R.INSTALL31183e18faf13e/tokenizers.bpe/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I./youtokentome/cpp -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c youtokentome/cpp/utils.cpp -o youtokentome/cpp/utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I./youtokentome/cpp -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c youtokentome/cpp/bpe.cpp -o youtokentome/cpp/bpe.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I./youtokentome/cpp -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c youtokentome/cpp/utf8.cpp -o youtokentome/cpp/utf8.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I./youtokentome/cpp -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_youtokentome.cpp -o rcpp_youtokentome.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I./youtokentome/cpp -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o tokenizers.bpe.so youtokentome/cpp/utils.o youtokentome/cpp/bpe.o youtokentome/cpp/utf8.o rcpp_youtokentome.o RcppExports.o -pthread -L/home/hornik/tmp/R/lib -lR rm -f youtokentome/cpp/utils.o youtokentome/cpp/bpe.o youtokentome/cpp/utf8.o rcpp_youtokentome.o RcppExports.o make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjzwXte/R.INSTALL31183e18faf13e/tokenizers.bpe/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-tokenizers.bpe/00new/tokenizers.bpe/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tokenizers.bpe) * installing *source* package ‘modeltime’ ... ** this is package ‘modeltime’ version ‘1.3.1’ ** package ‘modeltime’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modeltime) begin installing package ‘modeltime.resample’ begin installing package ‘healthyR.ai’ * installing *source* package ‘spatialsample’ ... ** this is package ‘spatialsample’ version ‘0.6.0’ ** package ‘spatialsample’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpmpInNz/R.INSTALL311f538d04e6d/spatialsample/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c code.cpp -o code.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o spatialsample.so code.o cpp11.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpmpInNz/R.INSTALL311f538d04e6d/spatialsample/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-spatialsample/00new/spatialsample/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spatialsample) * installing *source* package ‘healthyR.ai’ ... ** this is package ‘healthyR.ai’ version ‘0.1.1’ ** package ‘healthyR.ai’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (healthyR.ai) * installing *source* package ‘modeltime.resample’ ... ** this is package ‘modeltime.resample’ version ‘0.2.3’ ** package ‘modeltime.resample’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modeltime.resample) * installing *source* package ‘gaselect’ ... ** this is package ‘gaselect’ version ‘1.0.23’ ** package ‘gaselect’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++-14 -std=gnu++17 accepts -g... yes checking how to run the C++ preprocessor... g++-14 -std=gnu++17 -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdint.h... (cached) yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking climits usability... yes checking climits presence... yes checking for climits... yes Type unsigned long long is supported uint16_t and unit8_t are available in stdint.h uint16_t and unit8_t are available in inttypes.h Found builtin CTZ method (for unsigned long) Found builtin CTZ method (for unsigned long long) checking for ffsl... yes checking for ffsll... yes Found builtin popcount method (for unsigned long) Found builtin popcount method (for unsigned long long) checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/autoconfig.h ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpkyXhuM/R.INSTALL31111e790e76a2/gaselect/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c BICEvaluator.cpp -o BICEvaluator.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c Chromosome.cpp -o Chromosome.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c GenAlg.cpp -o GenAlg.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c LMEvaluator.cpp -o LMEvaluator.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c Logger.cpp -o Logger.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c MultiThreadedPopulation.cpp -o MultiThreadedPopulation.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c PLS.cpp -o PLS.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c PLSEvaluator.cpp -o PLSEvaluator.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c PLSSimpls.cpp -o PLSSimpls.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c RNG.cpp -o RNG.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c ShuffledSet.cpp -o ShuffledSet.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c SingleThreadPopulation.cpp -o SingleThreadPopulation.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -pthread -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__STDC_LIMIT_MACROS -fpic -g -O2 -Wall -pedantic -mtune=native -c UserFunEvaluator.cpp -o UserFunEvaluator.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o gaselect.so BICEvaluator.o Chromosome.o GenAlg.o LMEvaluator.o Logger.o MultiThreadedPopulation.o PLS.o PLSEvaluator.o PLSSimpls.o RNG.o ShuffledSet.o SingleThreadPopulation.o UserFunEvaluator.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -pthread -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpkyXhuM/R.INSTALL31111e790e76a2/gaselect/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-gaselect/00new/gaselect/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gaselect) * installing *source* package ‘ddalpha’ ... ** this is package ‘ddalpha’ version ‘1.3.16’ ** package ‘ddalpha’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGjQZxG/R.INSTALL311783186647b4/ddalpha/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c AlphaProcedure.cpp -o AlphaProcedure.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from AlphaProcedure.cpp:14: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c BandDepth.cpp -o BandDepth.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from BandDepth.cpp:1: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /usr/include/string.h:548, from /usr/include/c++/14/cstring:43, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/core/bit.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/integer/integer_log2.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/random/detail/integer_log2.hpp:19, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/random/detail/large_arithmetic.hpp:19, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/random/detail/const_mod.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/random/linear_congruential.hpp:28, from stdafx.h:24: In function ‘void* memcpy(void*, const void*, size_t)’, inlined from ‘void BandDepth(T3DMatrix, T3DMatrix, int, int, int, int, bool, int, double*)’ at BandDepth.cpp:43:15: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:33: warning: ‘void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int)’ specified bound 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Common.cpp -o Common.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from Common.cpp:10: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - Common.cpp: In function ‘double determinant(bMatrix&)’: Common.cpp:164:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘boost::numeric::ublas::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 164 | for (int i = 0; i < pivots.size(); ++i) | ~~^~~~~~~~~~~~~~~ Common.cpp:166:31: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 166 | if (pivots(i) != i) | ~~~~~~~~~~^~~~ Common.cpp: In function ‘void outVector(TPoint&)’: Common.cpp:270:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 270 | for (int j = 0; j < point.size(); j++){ | ~~^~~~~~~~~~~~~~ Common.cpp: In function ‘void outMatrix(TMatrix&)’: Common.cpp:280:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 280 | for (int i = 0; i < points.size(); i++){ | ~~^~~~~~~~~~~~~~~ Common.cpp:282:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 282 | for (int j = 0; j < points[i].size(); j++){ | ~~^~~~~~~~~~~~~~~~~~ Common.cpp: In function ‘void outFeatures(Features)’: Common.cpp:294:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 294 | for (int i = 0; i < fs.size(); i++){ | ~~^~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DKnn.cpp -o DKnn.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from DKnn.cpp:10: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - DKnn.cpp: In function ‘void knnGetClasses(TDMatrix, int*, int, int, int, TDMatrix, int, int, bool, int, int*)’: DKnn.cpp:76:28: warning: ‘ptPrjDepths’ may be used uninitialized [-Wmaybe-uninitialized] 76 | CountDepths(reflected, learnlabels, nlearn * 2, d, learnpoints, nlearn, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 | depthType, depths, tempDepths, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | car, dirs, prjs, ptPrjDepths, ndir // halfspace | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | ); | ~ DKnn.cpp:64:18: note: ‘ptPrjDepths’ was declared here 64 | TDMatrix ptPrjDepths; if (depthType == 1) ptPrjDepths = newM(ndir, 1); | ^~~~~~~~~~~ DKnn.cpp:76:28: warning: ‘prjs’ may be used uninitialized [-Wmaybe-uninitialized] 76 | CountDepths(reflected, learnlabels, nlearn * 2, d, learnpoints, nlearn, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 | depthType, depths, tempDepths, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | car, dirs, prjs, ptPrjDepths, ndir // halfspace | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | ); | ~ DKnn.cpp:63:18: note: ‘prjs’ was declared here 63 | TDMatrix prjs; if (depthType == 1) prjs = newM(ndir, nlearn * 2); | ^~~~ DKnn.cpp:76:28: warning: ‘dirs’ may be used uninitialized [-Wmaybe-uninitialized] 76 | CountDepths(reflected, learnlabels, nlearn * 2, d, learnpoints, nlearn, | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 | depthType, depths, tempDepths, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | car, dirs, prjs, ptPrjDepths, ndir // halfspace | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | ); | ~ DKnn.cpp:62:18: note: ‘dirs’ was declared here 62 | TDMatrix dirs; if (depthType == 1) dirs = newM(ndir, d); | ^~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c HD.cpp -o HD.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from HD.cpp:12: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Knn.cpp -o Knn.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from Knn.cpp:10: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c LensDepth.cpp -o LensDepth.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from LensDepth.cpp:15: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Mahalanobis.cpp -o Mahalanobis.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from Mahalanobis.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - Mahalanobis.cpp: In function ‘void MahalanobisDepth(TDMatrix, TDMatrix, int, int, int, double, double*)’: Mahalanobis.cpp:32:13: warning: unused variable ‘res’ [-Wunused-variable] 32 | int res = lu_factorize(A, pm); | ^~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c OjaDepth.cpp -o OjaDepth.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from OjaDepth.cpp:1: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Polynomial.cpp -o Polynomial.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from Polynomial.cpp:14: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - Polynomial.cpp: In function ‘TPoint PolynomialLearnCV(TDMatrix, int, int, int, int, int*, int*)’: Polynomial.cpp:396:25: warning: unused variable ‘tmp’ [-Wunused-variable] 396 | for (int i = 0, tmp; i < numPoints; i++){ input2[i][0] = input[i][1]; input2[i][1] = input[i][0]; } // swap columns | ^~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PotentialDepth.cpp -o PotentialDepth.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from PotentialDepth.cpp:1: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - PotentialDepth.cpp: In function ‘double EuclidianDistance(TPoint&, TPoint&)’: PotentialDepth.cpp:5:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 5 | for (int i = 0; i < x.size(); i++){ | ~~^~~~~~~~~~ PotentialDepth.cpp: In function ‘double EuclidianDistance2(TPoint&, TPoint&)’: PotentialDepth.cpp:13:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 13 | for (int i = 0; i< x.size(); i++){ | ~^~~~~~~~~~ PotentialDepth.cpp: In function ‘void PotentialDepths(TMatrix&, TVariables&, TMatrix&, TMatrix&, double (*)(TPoint&, TPoint&, double), double, int)’: PotentialDepth.cpp:60:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 60 | for (int i = 0; i < cardinalities.size(); classBeginning += cardinalities[i], i++){ | ~~^~~~~~~~~~~~~~~~~~~~~~ PotentialDepth.cpp:67:60: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘__gnu_cxx::__alloc_traits, int>::value_type’ {aka ‘int’} [-Wsign-compare] 67 | else if (classPointsDepths->size() < cardinalities[i]) PotentialDepth.cpp:76:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 76 | for (int p = 0; p < testpoints.size(); p++){ | ~~^~~~~~~~~~~~~~~~~~~ PotentialDepth.cpp:96:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 96 | for (int p = 0; p < testpoints.size(); p++){ | ~~^~~~~~~~~~~~~~~~~~~ PotentialDepth.cpp:65:25: warning: ‘classPointsDepths’ may be used uninitialized [-Wmaybe-uninitialized] 65 | if (!classPointsDepths) | ^~ PotentialDepth.cpp:56:17: note: ‘classPointsDepths’ was declared here 56 | TPoint* classPointsDepths; | ^~~~~~~~~~~~~~~~~ PotentialDepth.cpp:63:25: warning: ‘classPoints’ may be used uninitialized [-Wmaybe-uninitialized] 63 | if (classPoints) delete[] classPoints; | ^~ PotentialDepth.cpp:55:18: note: ‘classPoints’ was declared here 55 | TMatrix* classPoints; | ^~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ProjectionDepth.cpp -o ProjectionDepth.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from ProjectionDepth.cpp:14: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - ProjectionDepth.cpp:21:12: warning: ‘int CompareDec(OrderRec, OrderRec)’ defined but not used [-Wunused-function] 21 | static int CompareDec(OrderRec x, OrderRec y) | ^~~~~~~~~~ ProjectionDepth.cpp:16:12: warning: ‘int CompareAsc(OrderRec, OrderRec)’ defined but not used [-Wunused-function] 16 | static int CompareAsc(OrderRec x, OrderRec y) | ^~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SimplicialDepth.cpp -o SimplicialDepth.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from SimplicialDepth.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - SimplicialDepth.cpp: In function ‘void SimplicialDepthsEx(TDMatrix, TDMatrix, int, int, int, double*)’: SimplicialDepth.cpp:46:22: warning: unused variable ‘sc’ [-Wunused-variable] 46 | bool sc = numSimplicesChecked == div0; | ^~ SimplicialDepth.cpp: In function ‘long long unsigned int intSD2(double**, int)’: SimplicialDepth.cpp:153:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long long unsigned int’ [-Wsign-compare] 153 | for (int i = nh; i < nn; i++) { | ~~^~~~ SimplicialDepth.cpp:154:27: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 154 | while ((j <= nh - 1) && (alpha[j] + M_PI <= alpha[i] - eps)) j++; | ~~^~~~~~~~~ In file included from /usr/include/string.h:548, from /usr/include/c++/14/cstring:43, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/core/bit.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/integer/integer_log2.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/random/detail/integer_log2.hpp:19, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/random/detail/large_arithmetic.hpp:19, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/random/detail/const_mod.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/random/linear_congruential.hpp:28, from stdafx.h:24: In function ‘void* memcpy(void*, const void*, size_t)’, inlined from ‘void SimplicialDepthsEx(TDMatrix, TDMatrix, int, int, int, double*)’ at SimplicialDepth.cpp:36:10: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:33: warning: ‘void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int)’ specified bound 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘void* memcpy(void*, const void*, size_t)’, inlined from ‘void SimplicialDepthsApx(TDMatrix, TDMatrix, int, int, int, long long unsigned int, double*)’ at SimplicialDepth.cpp:98:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:33: warning: ‘void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int)’ specified bound 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TukeyDepth.cpp -o TukeyDepth.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from TukeyDepth.cpp:14: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ZonoidDepth.cpp -o ZonoidDepth.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from ZonoidDepth.cpp:15: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - ZonoidDepth.cpp: In function ‘double ZonoidDepth(std::vector >&, TPoint&, int&)’: ZonoidDepth.cpp:403:21: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 403 | if (x_sort.size() == n) { /* Allocation successful. */ | ~~~~~~~~~~~~~~^~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c asa047.cpp -o asa047.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ddalpha.cpp -o ddalpha.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from ddalpha.cpp:14: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - ddalpha.cpp: In function ‘void AlphaLearn(double*, int*, int*, int*, int*, int*, double*)’: ddalpha.cpp:295:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 295 | for (int i = 0; i < direction.size(); i++){ | ~~^~~~~~~~~~~~~~~~~~ ddalpha.cpp: In function ‘void AlphaLearnCV(double*, int*, int*, int*, int*, int*, int*, int*, double*)’: ddalpha.cpp:314:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 314 | for (int i = 0; i < direction.size(); i++){ | ~~^~~~~~~~~~~~~~~~~~ ddalpha.cpp: In function ‘void AlphaClassify(double*, int*, int*, int*, double*, int*)’: ddalpha.cpp:330:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 330 | for (int i = 0; i < _x[0].size(); i++){ | ~~^~~~~~~~~~~~~~ gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c depth.fd.f -o depth.fd.o depth.fd.f:119:28: 119 | integer I,J,K,OM(NR),L | 1 Warning: Unused variable ‘l’ declared at (1) [-Wunused-variable] depth.fd.f:119:26: 119 | integer I,J,K,OM(NR),L | 1 Warning: Unused variable ‘om’ declared at (1) [-Wunused-variable] depth.fd.f:1169:25: 1169 | INTEGER hF(N),I,J,K | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] depth.fd.f:1203:25: 1203 | INTEGER hF(N),I,J,K | 1 Warning: Unused variable ‘k’ declared at (1) [-Wunused-variable] depth.fd.f:241:24: 241 | INTEGER FUNCTION K(M,J) | ^ Warning: ‘__result_k’ may be used uninitialized [-Wmaybe-uninitialized] gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c stdafx.cpp -o stdafx.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/apply.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_optimization.hpp:18, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array_wrapper.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/serialization/array.hpp:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/storage.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/vector.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/numeric/ublas/matrix.hpp:18, from stdafx.h:21, from stdafx.cpp:5: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o ddalpha.so AlphaProcedure.o BandDepth.o Common.o DKnn.o HD.o Knn.o LensDepth.o Mahalanobis.o OjaDepth.o Polynomial.o PotentialDepth.o ProjectionDepth.o SimplicialDepth.o TukeyDepth.o ZonoidDepth.o asa047.o ddalpha.o depth.fd.o init.o stdafx.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGjQZxG/R.INSTALL311783186647b4/ddalpha/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ddalpha/00new/ddalpha/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ddalpha) * installing *source* package ‘TDA’ ... ** this is package ‘TDA’ version ‘1.9.4’ ** package ‘TDA’ successfully unpacked and MD5 sums checked ** using staged installation ** libs /bin/sh: 1: clang++: not found expr: syntax error: unexpected argument ‘50000’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMzxLEv/R.INSTALL310edc33ec4672/TDA/src' /bin/sh: 1: clang++: not found expr: syntax error: unexpected argument ‘50000’ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DBOOST_DISABLE_THREADS -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Dense:1, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:28, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ 96 | class SparseMatrix | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DBOOST_DISABLE_THREADS -DCGAL_EIGEN3_ENABLED -DCGAL_HEADER_ONLY -fpic -g -O2 -Wall -pedantic -mtune=native -c diag.cpp -o diag.o In file included from ./CGAL/license/Triangulation.h:17, from ./CGAL/Delaunay_triangulation.h:15, from ./gudhi/Alpha_complex.h:26, from ./tdautils/gudhiUtils.h:13, from diag.cpp:19: ./CGAL/config.h:124:9: warning: "BOOST_PARAMETER_MAX_ARITY" redefined 124 | #define BOOST_PARAMETER_MAX_ARITY 12 | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/parameter/aux_/is_tagged_argument.hpp:17, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/parameter/is_argument_pack.hpp:9, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/graph/named_function_params.hpp:20, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/graph/depth_first_search.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/graph/max_cardinality_matching.hpp:21, from ./topology/persistence-diagram.hpp:144, from ./topology/persistence-diagram.h:176, from ./tdautils/ripsL2.h:9, from diag.cpp:9: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/parameter/config.hpp:61:9: note: this is the location of the previous definition 61 | #define BOOST_PARAMETER_MAX_ARITY BOOST_MPL_LIMIT_VECTOR_SIZE | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/cstdfloat.hpp:27, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/multiprecision/detail/float128_functions.hpp:15, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/multiprecision/detail/fpclassify.hpp:13, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/multiprecision/detail/default_ops.hpp:15, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/multiprecision/detail/generic_interconvert.hpp:12, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/multiprecision/number.hpp:12, from ./CGAL/boost_mp.h:31, from ./CGAL/internal/Exact_type_selector.h:27, from ./CGAL/Epeck_d.h:22, from ./gudhi/Alpha_complex.h:28: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:714:16: warning: non-standard suffix on floating constant [-Wpedantic] 714 | else if (x == BOOST_FLOAT128_C(0.0)) | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/math/cstdfloat/cstdfloat_cmath.hpp:717:16: warning: non-standard suffix on floating constant [-Wpedantic] 717 | if (::BOOST_CSTDFLOAT_FLOAT128_FABS(x) < BOOST_CSTDFLOAT_FLOAT128_MIN) | ^~ In file included from ./phat/representations/bit_tree_pivot_column.h:22, from ./phat/boundary_matrix.h:22, from ./phat/compute_persistence_pairs.h:22, from ./tdautils/phatUtils.h:5, from diag.cpp:25: ./phat/representations/abstract_pivot_column.h:66: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 66 | #pragma omp parallel for ./phat/representations/abstract_pivot_column.h:81: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 81 | #pragma omp parallel for ./phat/boundary_matrix.h:182: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 182 | #pragma omp parallel for private( temp_col ) In file included from ./phat/compute_persistence_pairs.h:23: ./phat/helpers/dualize.h:46: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 46 | #pragma omp parallel for ./phat/helpers/dualize.h:57: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 57 | #pragma omp parallel for ./phat/helpers/dualize.h:61: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 61 | #pragma omp parallel for In file included from ./tdautils/phatUtils.h:12: ./phat/algorithms/chunk_reduction.h:55: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 55 | #pragma omp parallel for schedule( guided, 1 ) ./phat/algorithms/chunk_reduction.h:62: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 62 | #pragma omp parallel for schedule( guided, 1 ) ./phat/algorithms/chunk_reduction.h:76: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 76 | #pragma omp parallel for ./phat/algorithms/chunk_reduction.h:85: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 85 | #pragma omp parallel for schedule( guided, 1 ), private( temp_col ) ./phat/algorithms/chunk_reduction.h:152: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 152 | #pragma omp parallel for schedule( guided, 1 ), private( stack, cur_col_values ) In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/aux_/na_assert.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/arg.hpp:25, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/placeholders.hpp:24, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/iterator/iterator_categories.hpp:16, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/iterator/advance.hpp:12, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/next_prior.hpp:24, from ./tdautils/ripsL2.h:3: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses] 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/shared_ptr.hpp:17, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/property_map/vector_property_map.hpp:14, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/property_map/property_map.hpp:598, from ./utilities/property-maps.h:6, from ./topology/complex-traits.h:6, from ./topology/filtration.h:7, from ./tdautils/ripsL2.h:6: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/detail/shared_count.hpp:326:33: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 326 | explicit shared_count( std::auto_ptr & r ): pi_( new sp_counted_impl_p( r.get() ) ) | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/detail/shared_count.hpp:23: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/shared_ptr.hpp:354:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 354 | explicit shared_ptr( std::auto_ptr & r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/shared_ptr.hpp:365:22: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 365 | shared_ptr( std::auto_ptr && r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/shared_ptr.hpp:423:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 423 | shared_ptr & operator=( std::auto_ptr & r ) | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/shared_ptr.hpp:430:34: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 430 | shared_ptr & operator=( std::auto_ptr && r ) | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr& boost::shared_ptr::operator=(std::auto_ptr<_Up>&&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/shared_ptr.hpp:432:38: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 432 | this_type( static_cast< std::auto_ptr && >( r ) ).swap( *this ); | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/bind/mem_fn.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/bind/bind.hpp:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/multi_index/detail/ord_index_impl.hpp:82, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/multi_index/ordered_index.hpp:17, from ./topology/filtration.h:14: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/get_pointer.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/detail/shared_count.hpp:22: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/config/pragma_message.hpp:24:34: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 24 | # define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x))) | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/bind.hpp:36:1: note: in expansion of macro ‘BOOST_PRAGMA_MESSAGE’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from ./topology/dynamic-persistence.h:332, from ./tdautils/ripsL2.h:8: ./topology/dynamic-persistence.hpp: In member function ‘bool DynamicPersistenceTrails::transpose(iterator, const DimensionFunctor&, Visitor)’: ./topology/dynamic-persistence.hpp:60:73: warning: typedef ‘TrailIterator’ locally defined but not used [-Wunused-local-typedefs] 60 | typedef typename Element::Trail::iterator TrailIterator; | ^~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/scoped_ptr.hpp:13, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/graph/adjacency_list.hpp:22, from ./topology/persistence-diagram.hpp:143: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/scoped_ptr.hpp: At global scope: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/smart_ptr/scoped_ptr.hpp:75:31: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 75 | explicit scoped_ptr( std::auto_ptr p ) noexcept : px( p.release() ) | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:205, from ./gudhi/Alpha_complex/Alpha_kernel_d.h:16, from ./gudhi/Alpha_complex.h:15: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:174: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:165: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:271: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from ‘struct Eigen::internal::traits >’ 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from ‘class Eigen::Quaternion’ 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from diag.cpp:30: ./alphaComplex.h: In function ‘void alphaComplexDiag(const RealMatrix&, unsigned int, unsigned int, int, const std::string&, bool, bool, const Print&, std::vector > >&, std::vector > >&, std::vector > > >&)’: ./alphaComplex.h:45:9: warning: typedef ‘using Point = CGAL::Kernel_d_interface, CGAL::Epick_d > >::Point_d’ locally defined but not used [-Wunused-local-typedefs] 45 | using Point = Kernel::Point_d; | ^~~~~ In file included from diag.cpp:34: ./kde.h: In instantiation of ‘RealVector kde(const RealMatrix&, const RealMatrix&, unsigned int, unsigned int, unsigned int, double, const std::string&, const RealVector&, bool, const Print&) [with RealVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...); std::string = std::__cxx11::basic_string]’: diag.cpp:174:13: required from here 174 | return kde( | ~~~^ 175 | X, Grid, X.nrow(), Grid.ncol(), Grid.nrow(), h, kertype, weight, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 | printProgress, Rprintf); | ~~~~~~~~~~~~~~~~~~~~~~~ ./kde.h:21:16: warning: unused variable ‘pi’ [-Wunused-variable] 21 | const double pi = 3.141592653589793; | ^~ In file included from diag.cpp:16: ./tdautils/typecastUtils.h: In instantiation of ‘RcppList filtrationGudhiToRcpp(const SimplexTree&) [with RcppList = Rcpp::Vector<19>; RcppVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; SimplexTree = Gudhi::Simplex_tree<>]’: diag.cpp:416:63: required from here 416 | filtrationGudhiToRcpp< Rcpp::List, Rcpp::NumericVector >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 417 | AlphaShapeFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 | X, printProgress, Rprintf, coordinates)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./tdautils/typecastUtils.h:394:12: warning: unused variable ‘iFill’ [-Wunused-variable] 394 | unsigned iFill = 0; | ^~~~~ ./tdautils/typecastUtils.h: In instantiation of ‘void filtrationGudhiToTda(const SimplexTree&, VectorList&, RealVector&, VectorList&) [with IntegerVector = Rcpp::Vector<13>; SimplexTree = Gudhi::Simplex_tree<>; VectorList = Rcpp::Vector<19>; RealVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]’: ./rips.h:63:38: required from ‘void ripsFiltration(const RealMatrix&, unsigned int, unsigned int, int, double, const std::string&, const std::string&, bool, const Print&, VectorList&, RealVector&, VectorList&) [with IntVector = Rcpp::Vector<13>; RealMatrix = Rcpp::Matrix<14>; VectorList = Rcpp::Vector<19>; RealVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; Print = void(const char*, ...); std::string = std::__cxx11::basic_string]’ 63 | filtrationGudhiToTda< IntVector >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | RipsFiltrationGudhi< Gudhi::Simplex_tree<> >(X, nSample, nDim, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | maxdimension, maxscale, printProgress, print), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | cmplx, values, boundary); | ~~~~~~~~~~~~~~~~~~~~~~~~ diag.cpp:329:40: required from here 329 | ripsFiltration< Rcpp::IntegerVector >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 330 | X, X.nrow(), X.ncol(), maxdimension, maxscale, dist, library, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 | printProgress, Rprintf, cmplx, values, boundary); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./tdautils/typecastUtils.h:350:12: warning: unused variable ‘iFill’ [-Wunused-variable] 350 | unsigned iFill = 0; | ^~~~~ In file included from diag.cpp:13: ./tdautils/gridUtils.h: In instantiation of ‘void addOddTets(int, int, int, int, int, VectorList&) [with VectorList = std::vector >]’: ./tdautils/gridUtils.h:315:14: required from ‘void addAllTetrahedra(int, int, int, int, int, VectorList&) [with VectorList = std::vector >]’ 315 | addOddTets(ncols, nrows, i, j, k, cmplx); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./tdautils/gridUtils.h:363:20: required from ‘void simplicesFromGrid(const DimensionVector&, int, VectorList&) [with DimensionVector = Rcpp::Vector<13>; VectorList = std::vector >]’ 363 | addAllTetrahedra(ncols, nrows, i, j, k, cmplx); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./grid.h:90:22: required from ‘void gridFiltration(const RealVector&, const DimensionVector&, int, const std::string&, bool, const Print&, std::vector&, std::vector&) [with RealVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; DimensionVector = Rcpp::Vector<13>; Print = void(const char*, ...); VertexVector = std::vector; std::string = std::__cxx11::basic_string]’ 90 | simplicesFromGrid(gridDim, maxdimension + 1, cmplx); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ diag.cpp:76:17: required from here 76 | gridFiltration( | ~~~~~~~~~~~~~~^ 77 | FUNvalues, gridDim, maxdimension, decomposition, printProgress, Rprintf, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 | cmplx, values); | ~~~~~~~~~~~~~~ ./tdautils/gridUtils.h:183:13: warning: unused variable ‘value’ [-Wunused-variable] 183 | double value, value2; // max of value and value 2 is the fcn value. | ^~~~~ ./tdautils/gridUtils.h:183:20: warning: unused variable ‘value2’ [-Wunused-variable] 183 | double value, value2; // max of value and value 2 is the fcn value. | ^~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/assert.hpp:35, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/property_map/property_map.hpp:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept > >*, false> >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:31, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/property_map/property_map.hpp:20: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible > >*, false> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from ‘struct boost::range_detail::IncrementableIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept > >*, false> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable > >*, false> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:152:13: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:152:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >*, false> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:278:9: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >*, false> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:278:9: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept >, std::less, void> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:318:12: required from ‘struct boost::ForwardRangeConcept >, std::less, void> >’ 318 | struct ForwardRangeConcept : SinglePassRangeConcept | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:352:12: required from ‘struct boost::BidirectionalRangeConcept >, std::less, void> >’ 352 | struct BidirectionalRangeConcept : ForwardRangeConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::BidirectionalRangeConcept >, std::less, void> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept > >*, true> >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, true> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible > >*, true> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, true> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, true> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept > >*, true> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, true> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, true> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable > >*, true> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, true> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >*, true> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:281:9: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:281:9: required from ‘struct boost::SinglePassRangeConcept >, std::less, void> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:318:12: required from ‘struct boost::ForwardRangeConcept >, std::less, void> >’ 318 | struct ForwardRangeConcept : SinglePassRangeConcept | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:352:12: required from ‘struct boost::BidirectionalRangeConcept >, std::less, void> >’ 352 | struct BidirectionalRangeConcept : ForwardRangeConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::BidirectionalRangeConcept >, std::less, void> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >, std::less, void> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >, std::less, void> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:318:12: required from ‘struct boost::ForwardRangeConcept >, std::less, void> >’ 318 | struct ForwardRangeConcept : SinglePassRangeConcept | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:352:12: required from ‘struct boost::BidirectionalRangeConcept >, std::less, void> >’ 352 | struct BidirectionalRangeConcept : ForwardRangeConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::BidirectionalRangeConcept >, std::less, void> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >, std::less, void> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:137:5: required from ‘struct boost::DefaultConstructible > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:181:16: required from ‘struct boost::range_detail::ForwardIteratorConcept > >*, false> >’ 181 | struct ForwardIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::ForwardIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::DefaultConstructible > >*, false> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:191:13: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:191:13: required from ‘struct boost::range_detail::ForwardIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::ForwardIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >*, false> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:321:9: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::forward_traversal_tag]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:197:13: required from ‘struct boost::range_detail::ForwardIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::ForwardIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >*, false> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:321:9: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::ForwardIteratorConcept > >*, false> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::ForwardIteratorConcept > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:321:9: required from ‘struct boost::ForwardRangeConcept >, std::less, void> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:352:12: required from ‘struct boost::BidirectionalRangeConcept >, std::less, void> >’ 352 | struct BidirectionalRangeConcept : ForwardRangeConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::BidirectionalRangeConcept >, std::less, void> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >, std::less, void> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >, std::less, void> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::ForwardIteratorConcept::~ForwardIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:197:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 197 | BOOST_CONCEPT_USAGE(ForwardIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:137:5: required from ‘struct boost::DefaultConstructible > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:181:16: required from ‘struct boost::range_detail::ForwardIteratorConcept > >*, true> >’ 181 | struct ForwardIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::ForwardIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, true> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::DefaultConstructible > >*, true> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:197:13: required from ‘struct boost::range_detail::ForwardIteratorConcept > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::ForwardIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, true> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >*, true> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:322:9: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::ForwardIteratorConcept > >*, true> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::ForwardIteratorConcept > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:322:9: required from ‘struct boost::ForwardRangeConcept >, std::less, void> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:352:12: required from ‘struct boost::BidirectionalRangeConcept >, std::less, void> >’ 352 | struct BidirectionalRangeConcept : ForwardRangeConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::BidirectionalRangeConcept >, std::less, void> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >, std::less, void> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >, std::less, void> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::ForwardIteratorConcept::~ForwardIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:197:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 197 | BOOST_CONCEPT_USAGE(ForwardIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:218:14: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:218:14: required from ‘struct boost::range_detail::BidirectionalIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >*, false> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:355:9: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::bidirectional_traversal_tag]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:224:14: required from ‘struct boost::range_detail::BidirectionalIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >*, false> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:355:9: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, false> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:355:9: required from ‘struct boost::BidirectionalRangeConcept >, std::less, void> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::BidirectionalRangeConcept >, std::less, void> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >, std::less, void> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >, std::less, void> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::BidirectionalIteratorConcept::~BidirectionalIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:224:14: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 224 | BOOST_CONCEPT_USAGE(BidirectionalIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:224:14: required from ‘struct boost::range_detail::BidirectionalIteratorConcept > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, true> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ > >*, true> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:356:9: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, true> >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:356:9: required from ‘struct boost::BidirectionalRangeConcept >, std::less, void> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::BidirectionalRangeConcept >, std::less, void> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >, std::less, void> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >, std::less, void> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::BidirectionalIteratorConcept::~BidirectionalIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:224:14: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 224 | BOOST_CONCEPT_USAGE(BidirectionalIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::BidirectionalRangeConcept >, std::less, void> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/size_type.hpp:20, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/size.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/functions.hpp:20, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/iterator_range_core.hpp:38, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/iterator_range.hpp:13, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/irange.hpp:16, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/graph/detail/adjacency_list.hpp:21, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/graph/adjacency_list.hpp:255: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:352:12: note: in a call to non-static member function ‘boost::BidirectionalRangeConcept >, std::less, void> >::~BidirectionalRangeConcept()’ 352 | struct BidirectionalRangeConcept : ForwardRangeConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ 178 | class Matrix | ^~~~~~ ./CGAL/NewKernel_d/function_objects_cartesian.h:659:14: required from ‘CGAL::CartesianDKernelFunctors::Construct_circumcenter::result_type CGAL::CartesianDKernelFunctors::Construct_circumcenter::operator()(Iter, Iter) const [with Iter = CGAL::transforming_iterator >*, std::vector >, std::allocator > > > >, CGAL::Default, CGAL::Default>; R_ = CGAL::Epick_d_help3; result_type = std::vector]’ 659 | Matrix m(d,d); | ^ ./CGAL/NewKernel_d/function_objects_cartesian.h:733:17: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl >, Eigen::Matrix, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve >, Eigen::Matrix >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ ./CGAL/NewKernel_d/function_objects_cartesian.h:674:37: required from ‘CGAL::CartesianDKernelFunctors::Construct_circumcenter::result_type CGAL::CartesianDKernelFunctors::Construct_circumcenter::operator()(Iter, Iter) const [with Iter = CGAL::transforming_iterator >*, std::vector >, std::allocator > > > >, CGAL::Default, CGAL::Default>; R_ = CGAL::Epick_d_help3; result_type = std::vector]’ 674 | Vec res=m.partialPivLu().solve(b); | ~~~~~~~~~~~~~~~~~~~~~~^~~ ./CGAL/NewKernel_d/function_objects_cartesian.h:733:17: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 1>, Eigen::Matrix, Eigen::Dense>’ 86 | class SolveImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 1>, Eigen::Matrix >’ 62 | class Solve : public SolveImpl::StorageKind> | ^~~~~ ./CGAL/NewKernel_d/function_objects_cartesian.h:706:29: required from ‘CGAL::CartesianDKernelFunctors::Construct_circumcenter::result_type CGAL::CartesianDKernelFunctors::Construct_circumcenter::operator()(Iter, Iter) const [with Iter = CGAL::transforming_iterator >*, std::vector >, std::allocator > > > >, CGAL::Default, CGAL::Default>; R_ = CGAL::Epick_d_help3; result_type = std::vector]’ 706 | Vec res=m.ldlt().solve(b); | ~~~~~~~~~~~~~~^~~ ./CGAL/NewKernel_d/function_objects_cartesian.h:733:17: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept > >*, false> >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible::~CopyConstructible() [with TT = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable::~EqualityComparable() [with TT = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept > >*, true> >’ 125 | struct IncrementableIteratorConcept : CopyConstructible | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, true> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible::~CopyConstructible() [with TT = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, true> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, true> >’ 147 | struct SinglePassIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable::~EqualityComparable() [with TT = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, true> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >, std::less, void> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >, std::less, void> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >, std::less, void> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:318:12: required from ‘struct boost::ForwardRangeConcept >, std::less, void> >’ 318 | struct ForwardRangeConcept : SinglePassRangeConcept | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:352:12: required from ‘struct boost::BidirectionalRangeConcept >, std::less, void> >’ 352 | struct BidirectionalRangeConcept : ForwardRangeConcept | ^~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::BidirectionalRangeConcept >, std::less, void> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = boost::container::flat_map >, std::less, void>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::DefaultConstructible > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:137:5: required from ‘struct boost::DefaultConstructible > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:181:16: required from ‘struct boost::range_detail::ForwardIteratorConcept > >*, false> >’ 181 | struct ForwardIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::ForwardIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::DefaultConstructible::~DefaultConstructible() [with TT = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:137:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 137 | BOOST_CONCEPT_USAGE(DefaultConstructible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::forward_traversal_tag]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::ForwardIteratorConcept > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:197:13: required from ‘struct boost::range_detail::ForwardIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::ForwardIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::ForwardIteratorConcept::~ForwardIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:197:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 197 | BOOST_CONCEPT_USAGE(ForwardIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::DefaultConstructible > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:137:5: required from ‘struct boost::DefaultConstructible > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:181:16: required from ‘struct boost::range_detail::ForwardIteratorConcept > >*, true> >’ 181 | struct ForwardIteratorConcept | ^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::ForwardIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::DefaultConstructible::~DefaultConstructible() [with TT = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:137:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 137 | BOOST_CONCEPT_USAGE(DefaultConstructible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::ForwardIteratorConcept > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:197:13: required from ‘struct boost::range_detail::ForwardIteratorConcept > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::ForwardIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, true> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::ForwardIteratorConcept::~ForwardIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:197:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 197 | BOOST_CONCEPT_USAGE(ForwardIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::bidirectional_traversal_tag]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, false> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, false> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:224:14: required from ‘struct boost::range_detail::BidirectionalIteratorConcept > >*, false> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, false> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, false> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, false> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::BidirectionalIteratorConcept::~BidirectionalIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, false>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:224:14: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 224 | BOOST_CONCEPT_USAGE(BidirectionalIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, true> >]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >*, true> > >]’ 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:224:14: required from ‘struct boost::range_detail::BidirectionalIteratorConcept > >*, true> >’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::BidirectionalIteratorConcept > >*, true> >]’ 32 | inline yes has_constraints_(Model*, wrap_constraints* = 0); | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >*, true> > >::value’ 44 | , value = sizeof( detail::has_constraints_((Model*)0) ) == sizeof(detail::yes) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >*, true> > >’ 45 | typedef boost::integral_constant type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >, std::less, void> >)>’ 72 | struct requirement_ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/adaptor/reversed.hpp:52:13: required from ‘boost::range_detail::reversed_range boost::adaptors::reverse(BidirectionalRange&) [with BidirectionalRange = boost::container::flat_map >, std::less, void>]’ 92 | &::boost::concepts::requirement_::failed> \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Simplex_tree.h:1400:50: required from ‘bool Gudhi::Simplex_tree::make_filtration_non_decreasing() [with SimplexTreeOptions = Gudhi::Simplex_tree_options_full_featured]’ 1400 | for (auto& simplex : boost::adaptors::reverse(root_.members())) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:463:47: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 463 | complex.make_filtration_non_decreasing(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::BidirectionalIteratorConcept::~BidirectionalIteratorConcept() [with Iterator = boost::container::vec_iterator > >*, true>]’ 37 | ~model() | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include/boost/range/concepts.hpp:224:14: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 224 | BOOST_CONCEPT_USAGE(BidirectionalIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:533:30: required from ‘void Eigen::PartialPivLU::compute() [with _MatrixType = Eigen::Matrix]’ 533 | m_l1_norm = m_lu.cwiseAbs().colwise().sum().maxCoeff(); | ~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:133:14: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, Eigen::internal::member_sum, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, Eigen::internal::member_sum, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, Eigen::internal::member_sum, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from ‘class Eigen::PartialReduxExpr, const Eigen::Matrix >, Eigen::internal::member_sum, 0>’ 56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr >::type, | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:533:46: required from ‘void Eigen::PartialPivLU::compute() [with _MatrixType = Eigen::Matrix]’ 533 | m_l1_norm = m_lu.cwiseAbs().colwise().sum().maxCoeff(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:133:14: required from ‘Eigen::PartialPivLU& Eigen::PartialPivLU::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ 133 | compute(); | ~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:315:10: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ 63 | template class Diagonal | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:325:19: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 0>, -1, 1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 0>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 0>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 0>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:325:43: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 325 | mat.diagonal().tail(size-k).cwiseAbs().maxCoeff(&index_of_biggest_in_corner); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:358:80: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:358:67: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>’ 126 | class dense_product_base | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:35: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:179:81: required from ‘class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 179 | typedef typename internal::find_best_packet::type PacketScalar; | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:126:7: required from ‘class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>’ 126 | class dense_product_base | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:359:35: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:32: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, true>, -1, 1, false> > >’ 39 | template class ArrayBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >’ 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:56: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Array >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Array > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, Eigen::Array > >’ 39 | template class ArrayBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Array >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > > >’ 38 | >::type Scalar; | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, false> > >’ 39 | template class ArrayBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, -1, 1, false> >’ 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:387:32: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false>, 1, -1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, 1, -1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase >’ 39 | template class ArrayBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:277: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 1464 | struct unary_evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 1464 | struct unary_evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, -1, 1, false>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:385:13: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ 385 | A21 /= realAkk; | ~~~~^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:526:51: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1384:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, false> > >’ 1384 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1464:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 1464 | struct unary_evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<-1, 0> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<-1, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<-1, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<-1, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<-1, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<-1, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, -1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, -1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Ref.h:44:50: required from ‘struct Eigen::internal::traits, 0, Eigen::OuterStride<> > >::match, 0, Eigen::OuterStride<> >, -1, -1, false> >’ 44 | DerivedAlignment = int(evaluator::Alignment), | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Ref.h:288:101: required by substitution of ‘template Eigen::Ref, 0, Eigen::OuterStride<> >::Ref(const Eigen::DenseBase&, typename Eigen::internal::enable_if<(bool)(Eigen::internal::traits, 0, Eigen::OuterStride<> > >::match::MatchAtCompileTime), Derived>::type*) [with Derived = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>]’ 288 | typename internal::enable_if::MatchAtCompileTime),Derived>::type* = 0); | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:463:17: required from ‘static Eigen::Index Eigen::internal::partial_lu_impl::blocked_lu(Eigen::Index, Eigen::Index, Scalar*, Eigen::Index, PivIndex*, PivIndex&, Eigen::Index) [with Scalar = double; int StorageOrder = 0; PivIndex = int; int SizeAtCompileTime = -1; Eigen::Index = long int]’ 463 | BlockType A_0 = lu.block(0,0,rows,k); | ^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:519:17: required from ‘void Eigen::internal::partial_lu_inplace(MatrixType&, TranspositionType&, typename TranspositionType::StorageIndex&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; typename TranspositionType::StorageIndex = int]’ 515 | partial_lu_impl | ~~~~~~~~~~~~~~~ 516 | < typename MatrixType::Scalar, MatrixType::Flags&RowMajorBit?RowMajor:ColMajor, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 | typename TranspositionType::StorageIndex, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 | EIGEN_SIZE_MIN_PREFER_FIXED(MatrixType::RowsAtCompileTime,MatrixType::ColsAtCompileTime)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 | ::blocked_lu(lu.rows(), lu.cols(), &lu.coeffRef(0,0), lu.outerStride(), &row_transpositions.coeffRef(0), nb_transpositions); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:543:31: required from ‘void Eigen::PartialPivLU::compute() [with _MatrixType = Eigen::Matrix]’ 543 | internal::partial_lu_inplace(m_lu, m_rowsTranspositions, nb_transpositions); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:133:14: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 0, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:495:30: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix, 2>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Matrix, 2, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::Matrix, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Matrix, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:234:28: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:167:44: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:377:43: required from ‘static Eigen::Index Eigen::internal::partial_lu_impl::unblocked_lu(MatrixTypeRef&, PivIndex*, PivIndex&) [with Scalar = double; int StorageOrder = 0; PivIndex = int; int SizeAtCompileTime = -1; Eigen::Index = long int; MatrixTypeRef = Eigen::Ref, 0, Eigen::OuterStride<> >]’ 377 | = lu.col(k).tail(rows-k).unaryExpr(Scoring()).maxCoeff(&row_of_biggest_in_col); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:439:26: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0, 5>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:400:114: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0>, -1, 1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Visitor.h:79:51: required from ‘class Eigen::internal::visitor_evaluator, const Eigen::Block, 0>, -1, 1, false> > >’ 79 | CoeffReadCost = internal::evaluator::CoeffReadCost | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Visitor.h:123:17: required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, const Eigen::Block, 0>, -1, 1, false> >, 0>; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >]’ 123 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Visitor.h:374:14: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, -1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]’ 178 | generic_product_impl::subTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, -1, 1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 370 | typedef typename nested_eval::type RhsNested; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]’ 178 | generic_product_impl::subTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:361:25: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix, 2>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Matrix, 2, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, Eigen::Matrix, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Matrix, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:577:26: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ 63 | template class Diagonal | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:587:61: required from ‘void Eigen::LDLT::_solve_impl_transposed(const RhsType&, DstType&) const [with bool Conjugate = true; RhsType = Eigen::Matrix; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 587 | const typename Diagonal::RealReturnType vecD(vectorD()); | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:569:31: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ 52 | template class Transpose | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:175:44: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, Eigen::Matrix, 2>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >, Eigen::Matrix, 2> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >, Eigen::Matrix, 2> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base > >, Eigen::Matrix, 2, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl > >, Eigen::Matrix, 2, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product > >, Eigen::Matrix, 2>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:610:38: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, 1, false>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:599:18: required from ‘void Eigen::LDLT::_solve_impl_transposed(const RhsType&, DstType&) const [with bool Conjugate = true; RhsType = Eigen::Matrix; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ 599 | dst.row(i) /= vecD(i); | ~~~~~~~~~~~^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:569:31: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 16, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 16, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 16, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 16, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Eigen::Index = long int]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false> > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 221 | return m.cwiseAbs().sum(); | ~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]’ 269 | return internal::lpNorm_selector::run(*this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:514:74: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>]’ 251 | dst.coeffRef(0,0) = (lhs.transpose().cwiseProduct(rhs)).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Visitor.h:79:51: required from ‘class Eigen::internal::visitor_evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 79 | CoeffReadCost = internal::evaluator::CoeffReadCost | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Visitor.h:123:17: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:564:45: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ 564 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Visitor.h:79:51: required from ‘class Eigen::internal::visitor_evaluator, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 79 | CoeffReadCost = internal::evaluator::CoeffReadCost | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Visitor.h:123:17: required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, 0>; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >]’ 123 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Visitor.h:374:14: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:330: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:64:27: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 64 | SmallPanelWidth = EIGEN_PLAIN_ENUM_MAX(Traits::mr,Traits::nr), | ^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:493:62: required from ‘static Eigen::Index Eigen::internal::partial_lu_impl::blocked_lu(Eigen::Index, Eigen::Index, Scalar*, Eigen::Index, PivIndex*, PivIndex&, Eigen::Index) [with Scalar = double; int StorageOrder = 0; PivIndex = int; int SizeAtCompileTime = -1; Eigen::Index = long int]’ 493 | A11.template triangularView().solveInPlace(A12); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:519:17: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 433 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 434 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 435 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 460 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 461 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 462 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 465 | typedef QuadPacket RhsPacketx4; | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1080:42: required from ‘struct Eigen::internal::gebp_kernel, 4, 4, false, false>’ 1080 | typedef typename HalfTraits::LhsPacket LhsPacketHalf; | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:78:95: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 78 | gebp_kernel gebp_kernel; | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:493:62: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 433 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 434 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 435 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 460 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 461 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 462 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 465 | typedef QuadPacket RhsPacketx4; | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1085:45: required from ‘struct Eigen::internal::gebp_kernel, 4, 4, false, false>’ 1085 | typedef typename QuarterTraits::LhsPacket LhsPacketQuarter; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:78:95: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 78 | gebp_kernel gebp_kernel; | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:493:62: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:425:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 425 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:426:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 426 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:427:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 427 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:384:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 384 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:49: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 432 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && unpacket_traits<_RhsPacket>::vectorizable, | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:432:94: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 433 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:433:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 434 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:434:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 435 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:435:65: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 460 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:460:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 461 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:461:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 462 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:462:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 465 | typedef QuadPacket RhsPacketx4; | ^~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:465:33: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::OuterStride<> >’ 94 | template class Map | ^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:97:18: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 38 | >::type Scalar; | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:125:66: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 5; bool Conjugate = false]’ 125 | Map >(rhs+s,r) -= rhs[i] * cjLhs.col(i).segment(s,r); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/Core:333: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:87:38: required from ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’ 87 | typedef typename Traits::LhsPacket LhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:134:115: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 5; bool Conjugate = false]’ 134 | general_matrix_vector_product::run( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 135 | r, actualPanelWidth, | ~~~~~~~~~~~~~~~~~~~~ 136 | LhsMapper(&lhs.coeffRef(endBlock,startBlock), lhsStride), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | RhsMapper(rhs+startBlock, 1), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 | rhs+endBlock, 1, RhsScalar(-1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix; Rhs = Eigen::Matrix; int Side = 1; int Mode = 5]’ 71 | triangular_solve_vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | ::run(actualLhs.cols(), actualLhs.data(), actualLhs.outerStride(), actualRhs); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:237:61: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:91:42: required from ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’ 91 | typedef typename HalfTraits::LhsPacket LhsPacketHalf; | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:134:115: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 5; bool Conjugate = false]’ 134 | general_matrix_vector_product::run( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 135 | r, actualPanelWidth, | ~~~~~~~~~~~~~~~~~~~~ 136 | LhsMapper(&lhs.coeffRef(endBlock,startBlock), lhsStride), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | RhsMapper(rhs+startBlock, 1), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 | rhs+endBlock, 1, RhsScalar(-1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix; Rhs = Eigen::Matrix; int Side = 1; int Mode = 5]’ 71 | triangular_solve_vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | ::run(actualLhs.cols(), actualLhs.data(), actualLhs.outerStride(), actualRhs); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:237:61: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘class Eigen::internal::gemv_traits’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:95:45: required from ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’ 95 | typedef typename QuarterTraits::LhsPacket LhsPacketQuarter; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:134:115: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 5; bool Conjugate = false]’ 134 | general_matrix_vector_product::run( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 135 | r, actualPanelWidth, | ~~~~~~~~~~~~~~~~~~~~ 136 | LhsMapper(&lhs.coeffRef(endBlock,startBlock), lhsStride), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | RhsMapper(rhs+startBlock, 1), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 | rhs+endBlock, 1, RhsScalar(-1)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix; Rhs = Eigen::Matrix; int Side = 1; int Mode = 5]’ 71 | triangular_solve_vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | ::run(actualLhs.cols(), actualLhs.data(), actualLhs.outerStride(), actualRhs); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:237:61: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:44:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 44 | PACKET_DECL_COND_PREFIX(_, Lhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:45:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 45 | PACKET_DECL_COND_PREFIX(_, Rhs, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:46:27: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 46 | PACKET_DECL_COND_PREFIX(_, Res, _PacketSize); | ^ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:42:3: note: in definition of macro ‘PACKET_DECL_COND_PREFIX’ 42 | prefix ## name ## Packet | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 51 | Vectorizable = unpacket_traits<_LhsPacket>::vectorizable && | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:51:53: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 52 | unpacket_traits<_RhsPacket>::vectorizable && | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:52:38: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:42: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 53 | int(unpacket_traits<_LhsPacket>::size)==int(unpacket_traits<_RhsPacket>::size), | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:53:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 54 | LhsPacketSize = Vectorizable ? unpacket_traits<_LhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:54:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 55 | RhsPacketSize = Vectorizable ? unpacket_traits<_RhsPacket>::size : 1, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:55:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 56 | ResPacketSize = Vectorizable ? unpacket_traits<_ResPacket>::size : 1 | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:56:69: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 59 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:59:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 60 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:60:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] 61 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:61:73: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false>, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, false>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::Matrix >, -1, 1, true, false>’ 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::Matrix >, -1, 1, true, Eigen::Dense>’ 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::Matrix >, -1, 1, true>’ 103 | template class Block | ^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:72: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; SrcXprType = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; Functor = swap_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; SrcXprType = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; Src = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; Func = swap_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; Src = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:424:22: required from ‘void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; Derived = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>]’ 424 | call_assignment(derived(), other.const_cast_derived(), internal::swap_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:483:24: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = true]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:155:19: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 155 | pack_rhs(blockB+actual_kc*j2, other.getSubMapper(startBlock,j2), actualPanelWidth, actual_cols, actual_kc, blockBOffset); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:493:62: required from ‘static Eigen::Index Eigen::internal::partial_lu_impl::blocked_lu(Eigen::Index, Eigen::Index, Scalar*, Eigen::Index, PivIndex*, PivIndex&, Eigen::Index) [with Scalar = double; int StorageOrder = 0; PivIndex = int; int SizeAtCompileTime = -1; Eigen::Index = long int]’ 493 | A11.template triangularView().solveInPlace(A12); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:519:17: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2459 | PacketBlock kernel; | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int Pack1 = 4; int Pack2 = 2; Packet = __vector(2) double; bool Conjugate = false; bool PanelMode = false]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:162:21: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 162 | pack_lhs(blockA, tri.getSubMapper(startTarget,startBlock), actualPanelWidth, lengthTarget); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:493:62: required from ‘static Eigen::Index Eigen::internal::partial_lu_impl::blocked_lu(Eigen::Index, Eigen::Index, Scalar*, Eigen::Index, PivIndex*, PivIndex&, Eigen::Index) [with Scalar = double; int StorageOrder = 0; PivIndex = int; int SizeAtCompileTime = -1; Eigen::Index = long int]’ 493 | A11.template triangularView().solveInPlace(A12); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:519:17: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2100:82: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2100 | typedef typename unpacket_traits::half>::half QuarterPacket; | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2102:56: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2102 | HalfPacketSize = unpacket_traits::size, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 2103 | QuarterPacketSize = unpacket_traits::size, | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2103:62: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; ResScalar = double]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:164:24: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ 164 | gebp_kernel(other.getSubMapper(startTarget,j2), blockA, blockB+actual_kc*j2, lengthTarget, actualPanelWidth, actual_cols, Scalar(-1), | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | actualPanelWidth, actual_kc, 0, blockBOffset); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; int Side = 1; int Mode = 5]’ 100 | triangular_solve_matrix | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 | ::run(size, othersize, &actualLhs.coeffRef(0,0), actualLhs.outerStride(), &rhs.coeffRef(0,0), rhs.innerStride(), rhs.outerStride(), blocking); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 181 | internal::triangular_solver_selector::type, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 | Side, Mode>::run(derived().nestedExpression(), otherCopy); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:522:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Ref, 0, Eigen::OuterStride<> >; _MatrixType = Eigen::Ref, 0, Eigen::OuterStride<> >; unsigned int _Mode = 5]’ 522 | { return solveInPlace(other); } | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:493:62: required from ‘static Eigen::Index Eigen::internal::partial_lu_impl::blocked_lu(Eigen::Index, Eigen::Index, Scalar*, Eigen::Index, PivIndex*, PivIndex&, Eigen::Index) [with Scalar = double; int StorageOrder = 0; PivIndex = int; int SizeAtCompileTime = -1; Eigen::Index = long int]’ 493 | A11.template triangularView().solveInPlace(A12); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:519:17: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1920:103: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1920 | const int SResPacketHalfSize = unpacket_traits::half>::size; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1921 | const int SResPacketQuarterSize = unpacket_traits::half>::half>::size; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1921:138: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1977:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1977 | typedef typename conditional=8,typename unpacket_traits::half,SResPacket>::type SResPacketHalf; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1978:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1978 | typedef typename conditional=8,typename unpacket_traits::half,SLhsPacket>::type SLhsPacketHalf; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1979:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1979 | typedef typename conditional=8,typename unpacket_traits::half,SRhsPacket>::type SRhsPacketHalf; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1980 | typedef typename conditional=8,typename unpacket_traits::half,SAccPacket>::type SAccPacketHalf; | ^~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::OuterStride<> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::OuterStride<> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, 0, Eigen::OuterStride<> >, -1, 1, true>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl, 0, Eigen::OuterStride<> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, Eigen::DenseShape, Eigen::DenseShape, 7>’ 370 | typedef typename nested_eval::type RhsNested; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Ref, 0, Eigen::OuterStride<> >; Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double]’ 478 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 | ::scaleAndAddTo(dst_vec, a_lhs, a_rhs.col(0), alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:464:20: required from ‘static void Eigen::internal::generic_product_impl::subTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Ref, 0, Eigen::OuterStride<> >; Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >]’ 464 | scaleAndAddTo(dst, lhs, rhs, Scalar(-1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Ref, 0, Eigen::OuterStride<> >, 0>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Ref, 0, Eigen::OuterStride<> >, 0> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Ref, 0, Eigen::OuterStride<> >, 0> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Ref, 0, Eigen::OuterStride<> >, 0, 7>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Ref, 0, Eigen::OuterStride<> >, 0, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Ref, 0, Eigen::OuterStride<> >, 0>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:345:45: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from ‘struct Eigen::internal::plain_object_eval, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Dense>’ 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Ref, 0, Eigen::OuterStride<> >, Eigen::DenseShape, Eigen::DenseShape, 7>’ 369 | typedef typename nested_eval::type LhsNested; | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Ref, 0, Eigen::OuterStride<> >; Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double]’ 485 | return internal::generic_product_impl | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 | ::scaleAndAddTo(dst_vec, a_lhs.row(0), a_rhs, alpha); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:464:20: required from ‘static void Eigen::internal::generic_product_impl::subTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Ref, 0, Eigen::OuterStride<> >; Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >]’ 464 | scaleAndAddTo(dst, lhs, rhs, Scalar(-1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 2, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 2, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 2, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:296:40: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; Dest = Eigen::Block, -1, 1, false>; typename Dest::Scalar = double]’ 296 | dest.matrix() += actualAlpha * MappedDest(actualDestPtr, dest.size()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:388:34: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::OuterStride<> >’ 94 | template class Map | ^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:39:18: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:57: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ 94 | template class Map | ^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:73: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:72: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 6; bool Conjugate = false]’ 78 | rhs[i] -= (cjLhs.row(i).segment(s,k).transpose().cwiseProduct(Map >(rhs+s,k))).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:274:18: required from ‘void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const false_type&) [with Dst = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>; Lhs = Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>; Func = generic_product_impl, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, Eigen::DenseShape, Eigen::DenseShape, 5>::sub]’ 274 | evaluator rhsEval(rhs); | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:329:41: required from ‘static void Eigen::internal::generic_product_impl::subTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>; Lhs = Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>]’ 329 | internal::outer_product_selector_run(dst, lhs, rhs, sub(), is_row_major()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>; Lhs = Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>; int Options = 0; Scalar = double; SrcXprType = Eigen::Product, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0>]’ 178 | generic_product_impl::subTo(dst, src.lhs(), src.rhs()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>; Src = Eigen::Product, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0>; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/NoAlias.h:59:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, 0>; ExpressionType = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>; StorageBase = Eigen::MatrixBase]’ 59 | call_assignment_no_alias(m_expression, other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:400:77: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:280:48: required from ‘void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const false_type&) [with Dst = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>; Lhs = Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>; Func = generic_product_impl, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, false>, Eigen::DenseShape, Eigen::DenseShape, 5>::sub]’ 280 | func(dst.col(j), rhsEval.coeff(Index(0),j) * actual_lhs); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:329:41: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 1>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 1> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 1> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:120:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 1, 8>’ 120 | class dense_product_base | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:152:7: required from ‘class Eigen::ProductImpl, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 1, Eigen::Dense>’ 152 | class ProductImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, 1>’ 71 | class Product : public ProductImpl<_Lhs,_Rhs,Option, | ^~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:462:68: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false>, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, -1, -1, false>, 1, -1, false>; U = Eigen::Block, -1, 1, false>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, 1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = div_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = Eigen::internal::div_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = div_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:28: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, 1, false>; Scalar = double]’ 41 | internal::call_assignment(this->derived(), PlainObject::Constant(rows(),cols(),other), internal::div_assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:599:18: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> > >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> > >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> > > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> > > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::OuterStride<> > >’ 52 | template class Transpose | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:26: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, false> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, false> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, 1, -1, false>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >’ 52 | template class Transpose | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:207:43: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Matrix >, -1, 1, true> >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1: required from ‘ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; ResultType = double; Scalar = double]’ 97 | { return mat.MEMBER(); } \ | ~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21: required from ‘const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::Matrix >; MemberOp = Eigen::internal::member_sum; int Direction = 0; Scalar = double; Eigen::Index = long int]’ 183 | return m_functor(m_arg.template subVector(index)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:177:17: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>; U = Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:118:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true>, Eigen::Dense>’ 118 | template class TransposeImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >’ 52 | template class Transpose | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:50:23: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:50:56: required from ‘static Eigen::internal::dot_nocheck::ResScalar Eigen::internal::dot_nocheck::run(const Eigen::MatrixBase&, const Eigen::MatrixBase&) [with T = Eigen::Block, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true>; U = Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>; ResScalar = double]’ 50 | return a.transpose().template binaryExpr(b).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::OuterStride<> >, 1, -1, false> >, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase, 1, 1, false>, 2>’ 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, 1, false> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, 1, false> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, 1, false>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 1, 1, false, true>’ 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, -1, -1, false>, 1, -1, false> >, const Eigen::Block, -1, 1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = false]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:195:21: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, ResScalar*, Index, Index, ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; ResScalar = double]’ 195 | pack_rhs(blockB, rhs.getSubMapper(k2,j2), actual_kc, actual_nc); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:230:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Dest = Eigen::Ref, 0, Eigen::OuterStride<> >; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ 230 | Gemm::run(rows, cols, m_lhs.cols(), | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 231 | &m_lhs.coeffRef(row,0), m_lhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 | &m_rhs.coeffRef(0,col), m_rhs.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 | (Scalar*)&(m_dest.coeffRef(row,col)), m_dest.innerStride(), m_dest.outerStride(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 | m_actualAlpha, m_blocking, info); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:114:7: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = gemm_functor, Eigen::Ref, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, Eigen::Ref, 0, Eigen::OuterStride<> >, gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ 114 | func(0,rows, 0,cols); | ~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:509:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Ref, 0, Eigen::OuterStride<> >; Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Scalar = double]’ 508 | internal::parallelize_gemm<(Dest::MaxRowsAtCompileTime>32 || Dest::MaxRowsAtCompileTime==Dynamic)> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 | (GemmFunctor(lhs, rhs, dst, actualAlpha, blocking), a_lhs.rows(), a_rhs.cols(), a_lhs.cols(), Dest::Flags&RowMajorBit); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:464:20: required from ‘static void Eigen::internal::generic_product_impl::subTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Ref, 0, Eigen::OuterStride<> >; Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >]’ 464 | scaleAndAddTo(dst, lhs, rhs, Scalar(-1)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:2459:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 2459 | PacketBlock kernel; | ^~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1043:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 1043 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = sub_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map, 0, Eigen::Stride<0, 0> >; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Eigen::Index = long int]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > > >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:127: required from ‘static void Eigen::internal::triangular_solve_vector::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 6; bool Conjugate = false]’ 78 | rhs[i] -= (cjLhs.row(i).segment(s,k).transpose().cwiseProduct(Map >(rhs+s,k))).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose >; Rhs = Eigen::Matrix; int Side = 1; int Mode = 6]’ 71 | triangular_solve_vector | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | ::run(actualLhs.cols(), actualLhs.data(), actualLhs.outerStride(), actualRhs); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; Eigen::Index = long int]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::Matrix >, -1, 1, true> >; Scalar = double]’ 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1: required from ‘ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; ResultType = double; Scalar = double]’ 97 | { return mat.MEMBER(); } \ | ~~~~~~~~~~^~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21: required from ‘const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::Matrix >; MemberOp = Eigen::internal::member_sum; int Direction = 0; Scalar = double; Eigen::Index = long int]’ 183 | return m_functor(m_arg.template subVector(index)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:177:17: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:78: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> > >’ 722 | struct evaluator > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> > >’ 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:311:41: required from ‘struct Eigen::internal::unary_evaluator, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >, Eigen::internal::IndexBased, double>’ 311 | CoeffReadCost = evaluator::CoeffReadCost, | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> > >’ 90 | struct evaluator : public unary_evaluator | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:100:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> > >’ 100 | struct evaluator | ^~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:739:41: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false>, 1, -1, true> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ 739 | CoeffReadCost = int(evaluator::CoeffReadCost) + int(evaluator::CoeffReadCost) + int(functor_traits::Cost), | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:722:8: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true> >, 0>’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true> > >’ 41 | template class DenseBase | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true> > >’ 48 | template class MatrixBase | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, Eigen::Dense>’ 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::OuterStride<> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true> >’ 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:606:52: required from ‘const Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; int ProductTag = 8; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::Product::Lhs = Eigen::Ref, 0, Eigen::OuterStride<> >; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::Product::Rhs = Eigen::Ref, 0, Eigen::OuterStride<> >; CoeffReturnType = double; Eigen::Index = long int]’ 606 | return (m_lhs.row(row).transpose().cwiseProduct( m_rhs.col(col) )).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:654:63: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = sub_assign_op]’ 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Func = sub_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Func = sub_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from ‘Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Derived = Eigen::Block, 0, Eigen::OuterStride<> >, -1, -1, false>, -1, 1, true>]’ 164 | call_assignment(derived(), other.derived(), internal::sub_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:305:153: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, 1, false> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, 1, false>; SrcXprType = Eigen::Block, 1, 1, false>; Functor = Eigen::internal::assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, 1, 1, false>; Src = Eigen::Block, 1, 1, false>]’ 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:774:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::Block, -1, 1, true>; Functor = swap_assign_op]’ 774 | SrcEvaluatorType srcEvaluator(src); | ^~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::Block, -1, 1, true>; Functor = Eigen::internal::swap_assign_op; Weak = void]’ 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::Block, -1, 1, true>; Func = swap_assign_op]’ 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::Block, -1, 1, true>; Func = swap_assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]’ 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/DenseBase.h:424:22: required from ‘void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; Derived = Eigen::Block, -1, 1, true>]’ 424 | call_assignment(derived(), other.const_cast_derived(), internal::swap_assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:1129:51: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] ./CGAL/NewKernel_d/Kernel_d_interface.h:167:94: required from ‘CGAL::Kernel_d_interface::FT CGAL::Kernel_d_interface::Compute_squared_radius_d::operator()(I, I) const [with I = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Base_ = CGAL::Cartesian_wrap, CGAL::Epick_d >; CGAL::Kernel_d_interface::FT = double]’ 167 | return typename Get_functor::type(this->kernel())(b,e); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ ./gudhi/Alpha_complex/Alpha_kernel_d.h:73:53: required from ‘Gudhi::alpha_complex::Alpha_kernel_d::FT Gudhi::alpha_complex::Alpha_kernel_d::get_squared_radius(PointIterator, PointIterator) const [with PointIterator = __gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >; Kernel = CGAL::Epick_d; FT = double]’ 73 | return kernel_.compute_squared_radius_d_object()(begin, end); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ ./gudhi/Alpha_complex.h:339:38: required from ‘auto Gudhi::alpha_complex::Alpha_complex::radius(SimplicialComplexForAlpha&, typename SimplicialComplexForAlpha::Simplex_handle) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Kernel = CGAL::Epick_d; bool Weighted = false; typename SimplicialComplexForAlpha::Simplex_handle = boost::container::vec_iterator > >*, false>]’ 339 | return kernel_.get_squared_radius(v.cbegin(), v.cend()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ./gudhi/Alpha_complex.h:438:43: required from ‘bool Gudhi::alpha_complex::Alpha_complex::create_complex(SimplicialComplexForAlpha&, Filtration_value, bool, bool) [with SimplicialComplexForAlpha = Gudhi::Simplex_tree<>; Filtration_value = double; Kernel = CGAL::Epick_d; bool Weighted = false]’ 438 | auto const& sqrad = radius(complex, f_simplex); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ ./tdautils/gudhiUtils.h:390:45: required from ‘SimplexTree AlphaComplexFiltrationGudhi(const RealMatrix&, bool, Print&) [with SimplexTree = Gudhi::Simplex_tree<>; RealMatrix = Rcpp::Matrix<14>; Print = void(const char*, ...)]’ 390 | alpha_complex_from_points.create_complex(simplex); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ diag.cpp:492:59: required from here 492 | AlphaComplexFiltrationGudhi< Gudhi::Simplex_tree<> >( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 493 | X, printProgress, Rprintf)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /home/hornik/tmp/R/include/R.h:73, from diag.cpp:2: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/exceptions.h: In function ‘void Rcpp::Rf_warning(const char*, Args&& ...) [with Args = {const char*}]’: /home/hornik/tmp/R/include/R_ext/Error.h:85:17: warning: infinite recursion detected [-Winfinite-recursion] 85 | #define warning Rf_warning | ^~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/exceptions.h:190:17: note: in expansion of macro ‘warning’ 190 | inline void warning(const char* fmt, Args&&... args ) { | ^~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:133, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27, from diag.cpp:6: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/exceptions.h:191:19: note: recursive call 191 | Rf_warning("%s", tfm::format(fmt, std::forward(args)... ).c_str()); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o TDA.so RcppExports.o diag.o -lgmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMzxLEv/R.INSTALL310edc33ec4672/TDA/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-TDA/00new/TDA/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TDA) * installing *source* package ‘TDAvec’ ... ** this is package ‘TDAvec’ version ‘0.1.41’ ** package ‘TDAvec’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpneZUwz/R.INSTALL310ee42fe4264a/TDAvec/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c AlgebraicFunctions.cpp -o AlgebraicFunctions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c BettiCurve.cpp -o BettiCurve.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ComplexPolynomial.cpp -o ComplexPolynomial.o ComplexPolynomial.cpp: In function ‘arma::mat computeComplexPolynomial(const arma::mat&, const int&, const int&, std::string)’: ComplexPolynomial.cpp:50:16: warning: comparison of integer expressions of different signedness: ‘const arma::uword’ {aka ‘const unsigned int’} and ‘const int’ [-Wsign-compare] 50 | if (x.n_elem < m) stop("m must be less than or equal to the number of points in the diagram!"); | ~~~~~~~~~^~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c EulerCharacteristic.cpp -o EulerCharacteristic.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Limits.cpp -o Limits.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c NormalizedLife.cpp -o NormalizedLife.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c PersistenceBlock.cpp -o PersistenceBlock.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c PersistenceImage.cpp -o PersistenceImage.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c PersistenceLandscape.cpp -o PersistenceLandscape.o PersistenceLandscape.cpp: In function ‘arma::mat computePersistenceLandscape(const arma::mat&, const int&, const arma::vec&, const int&, const bool&, const std::string&, Rcpp::Nullable)’: PersistenceLandscape.cpp:36:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare] 36 | for (int i=0; i::value, typename T1::elem_type>::result arma::accu(const T1&) [with T1 = mtOp, eop_scalar_minus_post>, eop_abs>, eop_scalar_times>, eop_scalar_minus_pre>, op_clamp>]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/armadillo_bits/fn_accu.hpp:265:32, inlined from ‘typename arma::enable_if2<(arma::is_arma_type::value && arma::resolves_to_vector::yes), typename T1::elem_type>::result arma::sum(const T1&) [with T1 = mtOp, eop_scalar_minus_post>, eop_abs>, eop_scalar_times>, eop_scalar_minus_pre>, op_clamp>]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/armadillo_bits/fn_sum.hpp:31:14, inlined from ‘double tent_function_1D(const arma::vec&, const double&, const double&)’ at TemplateFunction.cpp:18:22: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/armadillo_bits/arrayops_meat.hpp:941:12: warning: ‘U.arma::quasi_unwrap, arma::eop_scalar_minus_post>, arma::eop_abs>, arma::eop_scalar_times>, arma::eop_scalar_minus_pre>, arma::op_clamp> >::M.arma::Mat::mem_local[0]’ may be used uninitialized [-Wmaybe-uninitialized] 941 | acc1 += (*src); | ~~~~~^~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/armadillo:480: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/armadillo_bits/fn_accu.hpp: In function ‘double tent_function_1D(const arma::vec&, const double&, const double&)’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/armadillo_bits/fn_accu.hpp:263:28: note: ‘U’ declared here 263 | const quasi_unwrap U(X); | ^ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c TropicalCoordinates.cpp -o TropicalCoordinates.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/Vector.h:51, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp.h:41, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo.h:32, from TropicalCoordinates.cpp:1: In static member function ‘static void Rcpp::Vector::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’, inlined from ‘static void Rcpp::Vector::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:523:46, inlined from ‘static void Rcpp::Vector::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:512:34, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:24, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1146:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create(const T& ...) [with T = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1128:50, inlined from ‘Rcpp::NumericVector computeTropicalCoordinates(const arma::mat&, const int&, const int&)’ at TropicalCoordinates.cpp:79:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:530:13: warning: ‘F2’ may be used uninitialized [-Wmaybe-uninitialized] 530 | *it = converter_type::get(u.object ) ; | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ TropicalCoordinates.cpp: In function ‘Rcpp::NumericVector computeTropicalCoordinates(const arma::mat&, const int&, const int&)’: TropicalCoordinates.cpp:51:10: note: ‘F2’ was declared here 51 | double F2; | ^~ In static member function ‘static void Rcpp::Vector::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’, inlined from ‘static void Rcpp::Vector::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:523:46, inlined from ‘static void Rcpp::Vector::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:512:34, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:24, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1146:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create(const T& ...) [with T = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1128:50, inlined from ‘Rcpp::NumericVector computeTropicalCoordinates(const arma::mat&, const int&, const int&)’ at TropicalCoordinates.cpp:79:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:530:13: warning: ‘F4’ may be used uninitialized [-Wmaybe-uninitialized] 530 | *it = converter_type::get(u.object ) ; | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ TropicalCoordinates.cpp: In function ‘Rcpp::NumericVector computeTropicalCoordinates(const arma::mat&, const int&, const int&)’: TropicalCoordinates.cpp:53:10: note: ‘F4’ was declared here 53 | double F4; | ^~ In static member function ‘static void Rcpp::Vector::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’, inlined from ‘static void Rcpp::Vector::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:523:46, inlined from ‘static void Rcpp::Vector::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:512:34, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:24, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1146:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create(const T& ...) [with T = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object}; int RTYPE = 14; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1128:50, inlined from ‘Rcpp::NumericVector computeTropicalCoordinates(const arma::mat&, const int&, const int&)’ at TropicalCoordinates.cpp:79:19: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:530:13: warning: ‘F3’ may be used uninitialized [-Wmaybe-uninitialized] 530 | *it = converter_type::get(u.object ) ; | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ TropicalCoordinates.cpp: In function ‘Rcpp::NumericVector computeTropicalCoordinates(const arma::mat&, const int&, const int&)’: TropicalCoordinates.cpp:52:10: note: ‘F3’ was declared here 52 | double F3; | ^~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o TDAvec.so AlgebraicFunctions.o BettiCurve.o ComplexPolynomial.o EulerCharacteristic.o Limits.o NormalizedLife.o PersistenceBlock.o PersistenceImage.o PersistenceLandscape.o PersistenceSilhouette.o PersistentEntropy.o RcppExports.o Stats.o TemplateFunction.o TropicalCoordinates.o -llapack -L/home/hornik/tmp/R/lib -lRblas -fopenmp -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpneZUwz/R.INSTALL310ee42fe4264a/TDAvec/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-TDAvec/00new/TDAvec/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TDAvec) * installing *source* package ‘aorsf’ ... ** this is package ‘aorsf’ version ‘0.1.5’ ** package ‘aorsf’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaGhae9/R.INSTALL3109b061cfc9d9/aorsf/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c AAA_check_cpp_version.cpp -o AAA_check_cpp_version.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Coxph.cpp -o Coxph.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Forest.cpp -o Forest.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ForestClassification.cpp -o ForestClassification.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ForestRegression.cpp -o ForestRegression.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ForestSurvival.cpp -o ForestSurvival.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c Tree.cpp -o Tree.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c TreeClassification.cpp -o TreeClassification.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c TreeRegression.cpp -o TreeRegression.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c TreeSurvival.cpp -o TreeSurvival.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c orsf_oop.cpp -o orsf_oop.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c utility.cpp -o utility.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o aorsf.so AAA_check_cpp_version.o Coxph.o Forest.o ForestClassification.o ForestRegression.o ForestSurvival.o RcppExports.o Tree.o TreeClassification.o TreeRegression.o TreeSurvival.o orsf_oop.o utility.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaGhae9/R.INSTALL3109b061cfc9d9/aorsf/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-aorsf/00new/aorsf/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (aorsf) * installing *source* package ‘shrinkTVP’ ... ** this is package ‘shrinkTVP’ version ‘3.1.0’ ** package ‘shrinkTVP’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpj9uR7K/R.INSTALL311545116787c7/shrinkTVP/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DG_MH_step.cpp -o DG_MH_step.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DG_log_ratio_value.cpp -o DG_log_ratio_value.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DG_sampling_functions.cpp -o DG_sampling_functions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c R_utilities.cpp -o R_utilities.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TG_MH_step.cpp -o TG_MH_step.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TG_log_ratio_value.cpp -o TG_log_ratio_value.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TG_sampling_functions.cpp -o TG_sampling_functions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c common_sampling_functions.cpp -o common_sampling_functions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp_utilities.cpp -o cpp_utilities.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c do_rgig1.cpp -o do_rgig1.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dyn_sampling_steps.cpp -o dyn_sampling_steps.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c exports.cpp -o exports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rho_p_MH_step.cpp -o rho_p_MH_step.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sample_DG_TVP.cpp -o sample_DG_TVP.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sample_TG_TVP.cpp -o sample_TG_TVP.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sample_beta_McCausland.cpp -o sample_beta_McCausland.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sample_beta_McCausland_dyn.cpp -o sample_beta_McCausland_dyn.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c shrinkDTVP.cpp -o shrinkDTVP.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DARMA_WARN_LEVEL=0 -DARMA_NO_DEBUG -DSTRICT_R_HEADERS `/home/hornik/tmp/R/bin/Rscript -e "RcppGSL:::CFlags()"` -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/GIGrvg/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppProgress/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stochvol/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c shrinkTVP.cpp -o shrinkTVP.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o shrinkTVP.so DG_MH_step.o DG_log_ratio_value.o DG_sampling_functions.o R_utilities.o TG_MH_step.o TG_log_ratio_value.o TG_sampling_functions.o common_sampling_functions.o cpp_utilities.o do_rgig1.o dyn_sampling_steps.o exports.o rho_p_MH_step.o sample_DG_TVP.o sample_TG_TVP.o sample_beta_McCausland.o sample_beta_McCausland_dyn.o shrinkDTVP.o shrinkTVP.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpj9uR7K/R.INSTALL311545116787c7/shrinkTVP/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-shrinkTVP/00new/shrinkTVP/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shrinkTVP) * installing *source* package ‘sentencepiece’ ... ** this is package ‘sentencepiece’ version ‘0.2.3’ ** package ‘sentencepiece’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp479gHq/R.INSTALL3117ab695f9f43/sentencepiece/src' g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/arena.cc -o third_party/protobuf-lite/arena.o third_party/protobuf-lite/arena.cc: In member function ‘std::pair google::protobuf::internal::ArenaImpl::NewBuffer(size_t, size_t)’: third_party/protobuf-lite/arena.cc:237:17: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 237 | if (last_size != -1) { | ~~~~~~~~~~^~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/arenastring.cc -o third_party/protobuf-lite/arenastring.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/bytestream.cc -o third_party/protobuf-lite/bytestream.o In file included from third_party/protobuf-lite/bytestream.cc:36: third_party/protobuf-lite/bytestream.cc: In member function ‘virtual void google::protobuf::strings::ArrayByteSource::Skip(size_t)’: ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:186:50: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘google::protobuf::stringpiece_ssize_type’ {aka ‘long int’} [-Wsign-compare] 186 | #define GOOGLE_DCHECK_LE(A, B) GOOGLE_DCHECK((A) <= (B)) | ~~~~^~~~~~ ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:151:5: note: in definition of macro ‘GOOGLE_LOG_IF’ 151 | !(CONDITION) ? (void)0 : GOOGLE_LOG(LEVEL) | ^~~~~~~~~ ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:181:48: note: in expansion of macro ‘GOOGLE_CHECK’ 181 | #define GOOGLE_DCHECK(EXPRESSION) while(false) GOOGLE_CHECK(EXPRESSION) | ^~~~~~~~~~~~ ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:186:32: note: in expansion of macro ‘GOOGLE_DCHECK’ 186 | #define GOOGLE_DCHECK_LE(A, B) GOOGLE_DCHECK((A) <= (B)) | ^~~~~~~~~~~~~ third_party/protobuf-lite/bytestream.cc:157:3: note: in expansion of macro ‘GOOGLE_DCHECK_LE’ 157 | GOOGLE_DCHECK_LE(n, input_.size()); | ^~~~~~~~~~~~~~~~ third_party/protobuf-lite/bytestream.cc: In member function ‘virtual google::protobuf::StringPiece google::protobuf::strings::LimitByteSource::Peek()’: third_party/protobuf-lite/bytestream.cc:177:20: warning: comparison of integer expressions of different signedness: ‘google::protobuf::stringpiece_ssize_type’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 177 | if (piece.size() > limit_) { | ~~~~~~~~~~~~~^~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/coded_stream.cc -o third_party/protobuf-lite/coded_stream.o third_party/protobuf-lite/coded_stream.cc: In member function ‘bool google::protobuf::io::CodedInputStream::ReadLittleEndian32Fallback(google::protobuf::uint32*)’: third_party/protobuf-lite/coded_stream.cc:315:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 315 | if (BufferSize() >= sizeof(*value)) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc: In member function ‘bool google::protobuf::io::CodedInputStream::ReadLittleEndian64Fallback(google::protobuf::uint64*)’: third_party/protobuf-lite/coded_stream.cc:332:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 332 | if (BufferSize() >= sizeof(*value)) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc: In instantiation of ‘const google::protobuf::uint8* google::protobuf::io::{anonymous}::DecodeVarint64KnownSize(const google::protobuf::uint8*, google::protobuf::uint64*) [with long unsigned int N = 2; google::protobuf::uint8 = unsigned char; google::protobuf::uint64 = long unsigned int]’: third_party/protobuf-lite/coded_stream.cc:421:38: required from here 421 | next = DecodeVarint64KnownSize<2>(buffer, value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc:354:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 354 | for (int i = 0, offset = 0; i < N - 1; i++, offset += 7) { | ~~^~~~~~~ third_party/protobuf-lite/coded_stream.cc: In instantiation of ‘const google::protobuf::uint8* google::protobuf::io::{anonymous}::DecodeVarint64KnownSize(const google::protobuf::uint8*, google::protobuf::uint64*) [with long unsigned int N = 3; google::protobuf::uint8 = unsigned char; google::protobuf::uint64 = long unsigned int]’: third_party/protobuf-lite/coded_stream.cc:423:38: required from here 423 | next = DecodeVarint64KnownSize<3>(buffer, value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc:354:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 354 | for (int i = 0, offset = 0; i < N - 1; i++, offset += 7) { | ~~^~~~~~~ third_party/protobuf-lite/coded_stream.cc: In instantiation of ‘const google::protobuf::uint8* google::protobuf::io::{anonymous}::DecodeVarint64KnownSize(const google::protobuf::uint8*, google::protobuf::uint64*) [with long unsigned int N = 4; google::protobuf::uint8 = unsigned char; google::protobuf::uint64 = long unsigned int]’: third_party/protobuf-lite/coded_stream.cc:425:38: required from here 425 | next = DecodeVarint64KnownSize<4>(buffer, value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc:354:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 354 | for (int i = 0, offset = 0; i < N - 1; i++, offset += 7) { | ~~^~~~~~~ third_party/protobuf-lite/coded_stream.cc: In instantiation of ‘const google::protobuf::uint8* google::protobuf::io::{anonymous}::DecodeVarint64KnownSize(const google::protobuf::uint8*, google::protobuf::uint64*) [with long unsigned int N = 5; google::protobuf::uint8 = unsigned char; google::protobuf::uint64 = long unsigned int]’: third_party/protobuf-lite/coded_stream.cc:427:38: required from here 427 | next = DecodeVarint64KnownSize<5>(buffer, value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc:354:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 354 | for (int i = 0, offset = 0; i < N - 1; i++, offset += 7) { | ~~^~~~~~~ third_party/protobuf-lite/coded_stream.cc: In instantiation of ‘const google::protobuf::uint8* google::protobuf::io::{anonymous}::DecodeVarint64KnownSize(const google::protobuf::uint8*, google::protobuf::uint64*) [with long unsigned int N = 6; google::protobuf::uint8 = unsigned char; google::protobuf::uint64 = long unsigned int]’: third_party/protobuf-lite/coded_stream.cc:429:38: required from here 429 | next = DecodeVarint64KnownSize<6>(buffer, value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc:354:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 354 | for (int i = 0, offset = 0; i < N - 1; i++, offset += 7) { | ~~^~~~~~~ third_party/protobuf-lite/coded_stream.cc: In instantiation of ‘const google::protobuf::uint8* google::protobuf::io::{anonymous}::DecodeVarint64KnownSize(const google::protobuf::uint8*, google::protobuf::uint64*) [with long unsigned int N = 7; google::protobuf::uint8 = unsigned char; google::protobuf::uint64 = long unsigned int]’: third_party/protobuf-lite/coded_stream.cc:431:38: required from here 431 | next = DecodeVarint64KnownSize<7>(buffer, value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc:354:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 354 | for (int i = 0, offset = 0; i < N - 1; i++, offset += 7) { | ~~^~~~~~~ third_party/protobuf-lite/coded_stream.cc: In instantiation of ‘const google::protobuf::uint8* google::protobuf::io::{anonymous}::DecodeVarint64KnownSize(const google::protobuf::uint8*, google::protobuf::uint64*) [with long unsigned int N = 8; google::protobuf::uint8 = unsigned char; google::protobuf::uint64 = long unsigned int]’: third_party/protobuf-lite/coded_stream.cc:433:38: required from here 433 | next = DecodeVarint64KnownSize<8>(buffer, value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc:354:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 354 | for (int i = 0, offset = 0; i < N - 1; i++, offset += 7) { | ~~^~~~~~~ third_party/protobuf-lite/coded_stream.cc: In instantiation of ‘const google::protobuf::uint8* google::protobuf::io::{anonymous}::DecodeVarint64KnownSize(const google::protobuf::uint8*, google::protobuf::uint64*) [with long unsigned int N = 9; google::protobuf::uint8 = unsigned char; google::protobuf::uint64 = long unsigned int]’: third_party/protobuf-lite/coded_stream.cc:435:38: required from here 435 | next = DecodeVarint64KnownSize<9>(buffer, value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc:354:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 354 | for (int i = 0, offset = 0; i < N - 1; i++, offset += 7) { | ~~^~~~~~~ third_party/protobuf-lite/coded_stream.cc: In instantiation of ‘const google::protobuf::uint8* google::protobuf::io::{anonymous}::DecodeVarint64KnownSize(const google::protobuf::uint8*, google::protobuf::uint64*) [with long unsigned int N = 10; google::protobuf::uint8 = unsigned char; google::protobuf::uint64 = long unsigned int]’: third_party/protobuf-lite/coded_stream.cc:437:39: required from here 437 | next = DecodeVarint64KnownSize<10>(buffer, value); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ third_party/protobuf-lite/coded_stream.cc:354:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 354 | for (int i = 0, offset = 0; i < N - 1; i++, offset += 7) { | ~~^~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/common.cc -o third_party/protobuf-lite/common.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/extension_set.cc -o third_party/protobuf-lite/extension_set.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/generated_enum_util.cc -o third_party/protobuf-lite/generated_enum_util.o third_party/protobuf-lite/generated_enum_util.cc: In function ‘bool google::protobuf::internal::InitializeEnumStrings(const EnumEntry*, const int*, size_t, ExplicitlyConstructed >*)’: third_party/protobuf-lite/generated_enum_util.cc:86:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 86 | for (int i = 0; i < size; ++i) { | ~~^~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/generated_message_table_driven_lite.cc -o third_party/protobuf-lite/generated_message_table_driven_lite.o In file included from third_party/protobuf-lite/generated_message_table_driven_lite.cc:31: ./third_party/protobuf-lite/google/protobuf/generated_message_table_driven_lite.h: In instantiation of ‘void google::protobuf::internal::ResetOneofField(const ParseTable&, int, google::protobuf::Arena*, google::protobuf::MessageLite*, google::protobuf::uint32*, google::protobuf::int64, const void*) [with ProcessingType field_type = google::protobuf::internal::ProcessingType_STRING; google::protobuf::uint32 = unsigned int; google::protobuf::int64 = long int]’: ./third_party/protobuf-lite/google/protobuf/generated_message_table_driven_lite.h:457:49: required from ‘bool google::protobuf::internal::MergePartialFromCodedStreamInlined(google::protobuf::MessageLite*, const ParseTable&, google::protobuf::io::CodedInputStream*) [with UnknownFieldHandler = {anonymous}::UnknownFieldHandlerLite; unsigned int kMaxTag = 127]’ 457 | ResetOneofField( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 458 | table, field_number, arena, msg, oneof_case + presence_index, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 | offset, default_ptr); | ~~~~~~~~~~~~~~~~~~~~ ./third_party/protobuf-lite/google/protobuf/generated_message_table_driven_lite.h:784:73: required from ‘bool google::protobuf::internal::MergePartialFromCodedStreamImpl(google::protobuf::MessageLite*, const ParseTable&, google::protobuf::io::CodedInputStream*) [with UnknownFieldHandler = {anonymous}::UnknownFieldHandlerLite]’ 784 | return MergePartialFromCodedStreamInlined( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 785 | msg, table, input); | ~~~~~~~~~~~~~~~~~~ third_party/protobuf-lite/generated_message_table_driven_lite.cc:100:66: required from here 100 | return MergePartialFromCodedStreamImpl(msg, table, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 101 | input); | ~~~~~~ ./third_party/protobuf-lite/google/protobuf/generated_message_table_driven_lite.h:175:19: warning: comparison of integer expressions of different signedness: ‘google::protobuf::uint32’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 175 | if (*oneof_case == field_number) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~ ./third_party/protobuf-lite/google/protobuf/generated_message_table_driven_lite.h: In instantiation of ‘void google::protobuf::internal::ResetOneofField(const ParseTable&, int, google::protobuf::Arena*, google::protobuf::MessageLite*, google::protobuf::uint32*, google::protobuf::int64, const void*) [with ProcessingType field_type = google::protobuf::internal::ProcessingType_MESSAGE; google::protobuf::uint32 = unsigned int; google::protobuf::int64 = long int]’: ./third_party/protobuf-lite/google/protobuf/generated_message_table_driven_lite.h:647:50: required from ‘bool google::protobuf::internal::MergePartialFromCodedStreamInlined(google::protobuf::MessageLite*, const ParseTable&, google::protobuf::io::CodedInputStream*) [with UnknownFieldHandler = {anonymous}::UnknownFieldHandlerLite; unsigned int kMaxTag = 127]’ 647 | ResetOneofField( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 648 | table, field_number, arena, msg, oneof_case + presence_index, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 | offset, NULL); | ~~~~~~~~~~~~~ ./third_party/protobuf-lite/google/protobuf/generated_message_table_driven_lite.h:784:73: required from ‘bool google::protobuf::internal::MergePartialFromCodedStreamImpl(google::protobuf::MessageLite*, const ParseTable&, google::protobuf::io::CodedInputStream*) [with UnknownFieldHandler = {anonymous}::UnknownFieldHandlerLite]’ 784 | return MergePartialFromCodedStreamInlined( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 785 | msg, table, input); | ~~~~~~~~~~~~~~~~~~ third_party/protobuf-lite/generated_message_table_driven_lite.cc:100:66: required from here 100 | return MergePartialFromCodedStreamImpl(msg, table, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 101 | input); | ~~~~~~ ./third_party/protobuf-lite/google/protobuf/generated_message_table_driven_lite.h:175:19: warning: comparison of integer expressions of different signedness: ‘google::protobuf::uint32’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 175 | if (*oneof_case == field_number) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/generated_message_util.cc -o third_party/protobuf-lite/generated_message_util.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/implicit_weak_message.cc -o third_party/protobuf-lite/implicit_weak_message.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/int128.cc -o third_party/protobuf-lite/int128.o third_party/protobuf-lite/int128.cc: In function ‘std::ostream& google::protobuf::operator<<(std::ostream&, const uint128&)’: third_party/protobuf-lite/int128.cc:178:13: warning: comparison of integer expressions of different signedness: ‘std::streamsize’ {aka ‘long int’} and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 178 | if (width > rep.size()) { | ~~~~~~^~~~~~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/io_win32.cc -o third_party/protobuf-lite/io_win32.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/message_lite.cc -o third_party/protobuf-lite/message_lite.o third_party/protobuf-lite/message_lite.cc: In member function ‘bool google::protobuf::MessageLite::SerializePartialToCodedStream(google::protobuf::io::CodedOutputStream*) const’: third_party/protobuf-lite/message_lite.cc:392:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 392 | if (final_byte_count - original_byte_count != size) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ third_party/protobuf-lite/message_lite.cc: In member function ‘bool google::protobuf::MessageLite::SerializePartialToArray(void*, int) const’: third_party/protobuf-lite/message_lite.cc:491:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 491 | if (size < byte_size) return false; | ~~~~~^~~~~~~~~~~ In file included from /usr/include/string.h:548, from ./third_party/protobuf-lite/google/protobuf/stubs/port.h:39, from ./third_party/protobuf-lite/google/protobuf/stubs/macros.h:34, from ./third_party/protobuf-lite/google/protobuf/stubs/common.h:46, from ./third_party/protobuf-lite/google/protobuf/message_lite.h:45, from third_party/protobuf-lite/message_lite.cc:36: In function ‘void* memcpy(void*, const void*, size_t)’, inlined from ‘google::protobuf::uint8* google::protobuf::io::EpsCopyOutputStream::WriteRaw(const void*, int, google::protobuf::uint8*)’ at ./third_party/protobuf-lite/google/protobuf/io/coded_stream.h:699:16, inlined from ‘virtual google::protobuf::uint8* google::protobuf::internal::ImplicitWeakMessage::_InternalSerialize(google::protobuf::uint8*, google::protobuf::io::EpsCopyOutputStream*) const’ at ./third_party/protobuf-lite/google/protobuf/implicit_weak_message.h:85:28, inlined from ‘bool google::protobuf::MessageLite::SerializePartialToZeroCopyStream(google::protobuf::io::ZeroCopyOutputStream*) const’ at third_party/protobuf-lite/message_lite.cc:419:30: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:33: warning: ‘void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int)’ specified size between 18446744071562067968 and 18446744073709551615 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/parse_context.cc -o third_party/protobuf-lite/parse_context.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/repeated_field.cc -o third_party/protobuf-lite/repeated_field.o In file included from ./third_party/protobuf-lite/google/protobuf/repeated_field.h:60, from third_party/protobuf-lite/repeated_field.cc:35: third_party/protobuf-lite/repeated_field.cc: In member function ‘void** google::protobuf::internal::RepeatedPtrFieldBase::InternalExtend(int)’: ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:159:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 159 | #define GOOGLE_CHECK_LE(A, B) GOOGLE_CHECK((A) <= (B)) | ~~~~^~~~~~ ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:151:5: note: in definition of macro ‘GOOGLE_LOG_IF’ 151 | !(CONDITION) ? (void)0 : GOOGLE_LOG(LEVEL) | ^~~~~~~~~ ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:159:31: note: in expansion of macro ‘GOOGLE_CHECK’ 159 | #define GOOGLE_CHECK_LE(A, B) GOOGLE_CHECK((A) <= (B)) | ^~~~~~~~~~~~ third_party/protobuf-lite/repeated_field.cc:61:3: note: in expansion of macro ‘GOOGLE_CHECK_LE’ 61 | GOOGLE_CHECK_LE(new_size, (std::numeric_limits::max() - kRepHeaderSize) / | ^~~~~~~~~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/status.cc -o third_party/protobuf-lite/status.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/statusor.cc -o third_party/protobuf-lite/statusor.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/stringpiece.cc -o third_party/protobuf-lite/stringpiece.o third_party/protobuf-lite/stringpiece.cc: In member function ‘bool google::protobuf::StringPiece::contains(google::protobuf::StringPiece) const’: third_party/protobuf-lite/stringpiece.cc:101:21: warning: comparison of integer expressions of different signedness: ‘google::protobuf::stringpiece_ssize_type’ {aka ‘long int’} and ‘const google::protobuf::StringPiece::size_type’ {aka ‘const long unsigned int’} [-Wsign-compare] 101 | return find(s, 0) != npos; | ~~~~~~~~~~~^~~~~~~ third_party/protobuf-lite/stringpiece.cc: In member function ‘google::protobuf::StringPiece google::protobuf::StringPiece::substr(size_type, size_type) const’: third_party/protobuf-lite/stringpiece.cc:262:11: warning: comparison of integer expressions of different signedness: ‘google::protobuf::StringPiece::size_type’ {aka ‘long unsigned int’} and ‘const google::protobuf::stringpiece_ssize_type’ {aka ‘const long int’} [-Wsign-compare] 262 | if (pos > length_) pos = length_; | ~~~~^~~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/stringprintf.cc -o third_party/protobuf-lite/stringprintf.o third_party/protobuf-lite/stringprintf.cc: In function ‘std::string google::protobuf::StringPrintfVector(const char*, const std::vector >&)’: third_party/protobuf-lite/stringprintf.cc:153:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 153 | for (int i = 0; i < v.size(); ++i) { | ~~^~~~~~~~~~ third_party/protobuf-lite/stringprintf.cc:156:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 156 | for (int i = v.size(); i < GOOGLE_ARRAYSIZE(cstr); ++i) { g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/structurally_valid.cc -o third_party/protobuf-lite/structurally_valid.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/strutil.cc -o third_party/protobuf-lite/strutil.o third_party/protobuf-lite/strutil.cc: In function ‘void google::protobuf::CEscapeAndAppend(StringPiece, std::string*)’: third_party/protobuf-lite/strutil.cc:562:19: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘google::protobuf::stringpiece_ssize_type’ {aka ‘long int’} [-Wsign-compare] 562 | if (escaped_len == src.size()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~ third_party/protobuf-lite/strutil.cc: In function ‘int google::protobuf::memcasecmp(const char*, const char*, size_t)’: third_party/protobuf-lite/strutil.cc:1289:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1289 | for ( int i = 0; i < len; i++ ) { | ~~^~~~~ third_party/protobuf-lite/strutil.cc: In function ‘int google::protobuf::GlobalReplaceSubstring(const std::string&, const std::string&, std::string*)’: third_party/protobuf-lite/strutil.cc:1622:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const std::__cxx11::basic_string::size_type’ {aka ‘const long unsigned int’} [-Wsign-compare] 1622 | match_pos != std::string::npos; pos = match_pos + substring.length(), | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/time.cc -o third_party/protobuf-lite/time.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/wire_format_lite.cc -o third_party/protobuf-lite/wire_format_lite.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/zero_copy_stream.cc -o third_party/protobuf-lite/zero_copy_stream.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/zero_copy_stream_impl.cc -o third_party/protobuf-lite/zero_copy_stream_impl.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/protobuf-lite/zero_copy_stream_impl_lite.cc -o third_party/protobuf-lite/zero_copy_stream_impl_lite.o In file included from third_party/protobuf-lite/zero_copy_stream_impl_lite.cc:41: third_party/protobuf-lite/zero_copy_stream_impl_lite.cc: In member function ‘virtual void google::protobuf::io::StringOutputStream::BackUp(int)’: ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:159:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 159 | #define GOOGLE_CHECK_LE(A, B) GOOGLE_CHECK((A) <= (B)) | ~~~~^~~~~~ ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:151:5: note: in definition of macro ‘GOOGLE_LOG_IF’ 151 | !(CONDITION) ? (void)0 : GOOGLE_LOG(LEVEL) | ^~~~~~~~~ ./third_party/protobuf-lite/google/protobuf/stubs/logging.h:159:31: note: in expansion of macro ‘GOOGLE_CHECK’ 159 | #define GOOGLE_CHECK_LE(A, B) GOOGLE_CHECK((A) <= (B)) | ^~~~~~~~~~~~ third_party/protobuf-lite/zero_copy_stream_impl_lite.cc:171:3: note: in expansion of macro ‘GOOGLE_CHECK_LE’ 171 | GOOGLE_CHECK_LE(count, target_->size()); | ^~~~~~~~~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/absl/strings/string_view.cc -o third_party/absl/strings/string_view.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c third_party/absl/flags/flag.cc -o third_party/absl/flags/flag.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/builtin_pb/sentencepiece.pb.cc -o sentencepiece/src/builtin_pb/sentencepiece.pb.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/builtin_pb/sentencepiece_model.pb.cc -o sentencepiece/src/builtin_pb/sentencepiece_model.pb.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/bpe_model.cc -o sentencepiece/src/bpe_model.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/bpe_model_trainer.cc -o sentencepiece/src/bpe_model_trainer.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/builder.cc -o sentencepiece/src/builder.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/char_model.cc -o sentencepiece/src/char_model.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/char_model_trainer.cc -o sentencepiece/src/char_model_trainer.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/error.cc -o sentencepiece/src/error.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/filesystem.cc -o sentencepiece/src/filesystem.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/model_factory.cc -o sentencepiece/src/model_factory.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/model_interface.cc -o sentencepiece/src/model_interface.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/normalizer.cc -o sentencepiece/src/normalizer.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/pretokenizer_for_training.cc -o sentencepiece/src/pretokenizer_for_training.o sentencepiece/src/pretokenizer_for_training.cc: In static member function ‘static std::string sentencepiece::pretokenizer::PretokenizerForTrainingInterface::Postprocess(const sentencepiece::SentencePieceText&)’: sentencepiece/src/pretokenizer_for_training.cc:49:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘google::protobuf::uint32’ {aka ‘unsigned int’} [-Wsign-compare] 49 | if (prev == piece.begin() && piece.begin() != 0) { | ~~~~~^~~~~~~~~~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/sentencepiece_processor.cc -o sentencepiece/src/sentencepiece_processor.o sentencepiece/src/sentencepiece_processor.cc: In member function ‘sentencepiece::util::Status sentencepiece::SentencePieceProcessor::PopulateSentencePieceText(absl::string_view, absl::string_view, const std::vector&, const sentencepiece::EncodeResult&, sentencepiece::SentencePieceText*) const’: sentencepiece/src/sentencepiece_processor.cc:372:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘absl::string_view::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 372 | for (int i = 0; i < w.size(); ++i) { | ~~^~~~~~~~~~ sentencepiece/src/sentencepiece_processor.cc:383:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘absl::string_view::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 383 | if (i == w.size() - 1) { | ~~^~~~~~~~~~~~~~~ sentencepiece/src/sentencepiece_processor.cc: In lambda function: sentencepiece/src/sentencepiece_processor.cc:628:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 628 | for (int j = 0; j < consumed; j++) { | ~~^~~~~~~~~~ sentencepiece/src/sentencepiece_processor.cc:632:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 632 | if (j == consumed - 1) { | ~~^~~~~~~~~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/sentencepiece_trainer.cc -o sentencepiece/src/sentencepiece_trainer.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/trainer_factory.cc -o sentencepiece/src/trainer_factory.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/trainer_interface.cc -o sentencepiece/src/trainer_interface.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/unicode_script.cc -o sentencepiece/src/unicode_script.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/unigram_model.cc -o sentencepiece/src/unigram_model.o sentencepiece/src/unigram_model.cc: In member function ‘std::vector, float> > sentencepiece::unigram::Lattice::NBest(size_t, bool, float)’: sentencepiece/src/unigram_model.cc:382:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 382 | for (int i = 0; i < end_nodes(node->pos).size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sentencepiece/src/unigram_model.cc:392:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 392 | for (int i = 0; i < adjusted_probs.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ sentencepiece/src/unigram_model.cc:403:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 403 | for (int i = 0; i < end_nodes(node->pos).size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sentencepiece/src/unigram_model.cc: In member function ‘virtual sentencepiece::NBestEncodeResult sentencepiece::unigram::Model::SampleEncodeAndScore(absl::string_view, float, int, bool, bool) const’: sentencepiece/src/unigram_model.cc:704:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 704 | for (int i = 0; i < nbest_samples.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~ sentencepiece/src/unigram_model.cc:714:25: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::vector, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 714 | if (index_of_best != nbest_samples.size()) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ sentencepiece/src/unigram_model.cc:756:27: warning: comparison of integer expressions of different signedness: ‘std::vector >, float> >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 756 | while (results.size() < samples) { | ~~~~~~~~~~~~~~~^~~~~~~~~ sentencepiece/src/unigram_model.cc: In member function ‘sentencepiece::EncodeResult sentencepiece::unigram::Model::EncodeOptimized(absl::string_view) const’: sentencepiece/src/unigram_model.cc:895:20: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 895 | while (key_pos < size) { | ~~~~~~~~^~~~~~ sentencepiece/src/unigram_model.cc:916:40: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘const int’ [-Wsign-compare] 916 | if (!has_single_node && length == mblen) { | ~~~~~~~^~~~~~~~ g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/unigram_model_trainer.cc -o sentencepiece/src/unigram_model_trainer.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/util.cc -o sentencepiece/src/util.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/word_model.cc -o sentencepiece/src/word_model.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sentencepiece/src/word_model_trainer.cc -o sentencepiece/src/word_model_trainer.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_sentencepiece.cpp -o rcpp_sentencepiece.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_wordpiece.cpp -o rcpp_wordpiece.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R/include" -DNDEBUG -D HAVE_PTHREAD=1 -pthread -D_USE_INTERNAL_STRING_VIEW -DSTRICT_R_HEADERS -I. -I./sentencepiece -I./sentencepiece/src -I./sentencepiece/src/builtin_pb -I./third_party/absl -I./third_party/darts_clone -I./third_party/esaxx -I./third_party/protobuf-lite -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++11 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o sentencepiece.so third_party/protobuf-lite/arena.o third_party/protobuf-lite/arenastring.o third_party/protobuf-lite/bytestream.o third_party/protobuf-lite/coded_stream.o third_party/protobuf-lite/common.o third_party/protobuf-lite/extension_set.o third_party/protobuf-lite/generated_enum_util.o third_party/protobuf-lite/generated_message_table_driven_lite.o third_party/protobuf-lite/generated_message_util.o third_party/protobuf-lite/implicit_weak_message.o third_party/protobuf-lite/int128.o third_party/protobuf-lite/io_win32.o third_party/protobuf-lite/message_lite.o third_party/protobuf-lite/parse_context.o third_party/protobuf-lite/repeated_field.o third_party/protobuf-lite/status.o third_party/protobuf-lite/statusor.o third_party/protobuf-lite/stringpiece.o third_party/protobuf-lite/stringprintf.o third_party/protobuf-lite/structurally_valid.o third_party/protobuf-lite/strutil.o third_party/protobuf-lite/time.o third_party/protobuf-lite/wire_format_lite.o third_party/protobuf-lite/zero_copy_stream.o third_party/protobuf-lite/zero_copy_stream_impl.o third_party/protobuf-lite/zero_copy_stream_impl_lite.o third_party/absl/strings/string_view.o third_party/absl/flags/flag.o sentencepiece/src/builtin_pb/sentencepiece.pb.o sentencepiece/src/builtin_pb/sentencepiece_model.pb.o sentencepiece/src/bpe_model.o sentencepiece/src/bpe_model_trainer.o sentencepiece/src/builder.o sentencepiece/src/char_model.o sentencepiece/src/char_model_trainer.o sentencepiece/src/error.o sentencepiece/src/filesystem.o sentencepiece/src/model_factory.o sentencepiece/src/model_interface.o sentencepiece/src/normalizer.o sentencepiece/src/pretokenizer_for_training.o sentencepiece/src/sentencepiece_processor.o sentencepiece/src/sentencepiece_trainer.o sentencepiece/src/trainer_factory.o sentencepiece/src/trainer_interface.o sentencepiece/src/unicode_script.o sentencepiece/src/unigram_model.o sentencepiece/src/unigram_model_trainer.o sentencepiece/src/util.o sentencepiece/src/word_model.o sentencepiece/src/word_model_trainer.o rcpp_sentencepiece.o rcpp_wordpiece.o RcppExports.o -pthread -L/home/hornik/tmp/R/lib -lR rm -f third_party/protobuf-lite/arena.o third_party/protobuf-lite/arenastring.o third_party/protobuf-lite/bytestream.o third_party/protobuf-lite/coded_stream.o third_party/protobuf-lite/common.o third_party/protobuf-lite/extension_set.o third_party/protobuf-lite/generated_enum_util.o third_party/protobuf-lite/generated_message_table_driven_lite.o third_party/protobuf-lite/generated_message_util.o third_party/protobuf-lite/implicit_weak_message.o third_party/protobuf-lite/int128.o third_party/protobuf-lite/io_win32.o third_party/protobuf-lite/message_lite.o third_party/protobuf-lite/parse_context.o third_party/protobuf-lite/repeated_field.o third_party/protobuf-lite/status.o third_party/protobuf-lite/statusor.o third_party/protobuf-lite/stringpiece.o third_party/protobuf-lite/stringprintf.o third_party/protobuf-lite/structurally_valid.o third_party/protobuf-lite/strutil.o third_party/protobuf-lite/time.o third_party/protobuf-lite/wire_format_lite.o third_party/protobuf-lite/zero_copy_stream.o third_party/protobuf-lite/zero_copy_stream_impl.o third_party/protobuf-lite/zero_copy_stream_impl_lite.o third_party/absl/strings/string_view.o third_party/absl/flags/flag.o sentencepiece/src/builtin_pb/sentencepiece.pb.o sentencepiece/src/builtin_pb/sentencepiece_model.pb.o sentencepiece/src/bpe_model.o sentencepiece/src/bpe_model_trainer.o sentencepiece/src/builder.o sentencepiece/src/char_model.o sentencepiece/src/char_model_trainer.o sentencepiece/src/error.o sentencepiece/src/filesystem.o sentencepiece/src/model_factory.o sentencepiece/src/model_interface.o sentencepiece/src/normalizer.o sentencepiece/src/pretokenizer_for_training.o sentencepiece/src/sentencepiece_processor.o sentencepiece/src/sentencepiece_trainer.o sentencepiece/src/trainer_factory.o sentencepiece/src/trainer_interface.o sentencepiece/src/unicode_script.o sentencepiece/src/unigram_model.o sentencepiece/src/unigram_model_trainer.o sentencepiece/src/util.o sentencepiece/src/word_model.o sentencepiece/src/word_model_trainer.o rcpp_sentencepiece.o rcpp_wordpiece.o RcppExports.o make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp479gHq/R.INSTALL3117ab695f9f43/sentencepiece/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-sentencepiece/00new/sentencepiece/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sentencepiece) checking dials_1.4.1.tar.gz ... checking agua_0.1.4.tar.gz ... checking baguette_1.1.0.tar.gz ... checking autostats_0.4.1.tar.gz ... checking censored_0.3.3.tar.gz ... checking bonsai_0.4.0.tar.gz ... checking discrim_1.0.1.tar.gz ... checking fastml_0.6.2.tar.gz ... checking finetune_1.2.1.tar.gz ... checking finnts_0.5.0.tar.gz ... checking flipr_0.3.3.tar.gz ... checking ldmppr_1.0.4.tar.gz ... checking healthyR.ai_0.1.1.tar.gz ... checking MachineShop_3.9.0.tar.gz ... checking modeltime_1.3.1.tar.gz ... checking MLwrap_0.1.0.tar.gz ... checking modeltime.resample_0.2.3.tar.gz ... checking rules_1.0.2.tar.gz ... checking tabnet_0.7.0.tar.gz ... checking tdarec_0.2.0.tar.gz ... checking tidyclust_0.2.4.tar.gz ... checking tidydann_1.0.1.tar.gz ... checking tidyfit_0.7.4.tar.gz ... checking tidymodels_1.3.0.tar.gz ... checking tidysdm_1.0.0.tar.gz ... checking tune_1.3.0.tar.gz ... checking viralmodels_1.3.4.tar.gz ... checking embed_1.1.5.tar.gz ... checking parsnip_1.3.2.tar.gz ... checking themis_1.0.3.tar.gz ... checking shapr_1.0.4.tar.gz ... checking healthyR.ts_0.3.1.tar.gz ... checking recipes_1.3.1.tar.gz ... checking workflowsets_1.1.1.tar.gz ... checking modeltime.ensemble_1.0.4.tar.gz ... checking workflows_1.2.0.tar.gz ... checking textrecipes_1.1.0.tar.gz ... Depends: Package: dials Depends: R (>= 4.1), scales (>= 1.3.0) Imports: cli, DiceDesign, dplyr (>= 0.8.5), glue, hardhat (>= 1.1.0), lifecycle, pillar, purrr, rlang (>= 1.1.0), sfd, tibble, utils, vctrs (>= 0.3.8), withr Timings: user system elapsed dials 97.218 7.071 106.462 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 2 34 Check results summary: dials ... OK rdepends_agua ... OK rdepends_autostats ... OK rdepends_baguette ... OK rdepends_bonsai ... OK rdepends_censored ... OK rdepends_discrim ... NOTE * checking Rd cross-references ... NOTE rdepends_embed ... OK rdepends_fastml ... OK rdepends_finetune ... OK rdepends_finnts ... OK rdepends_flipr ... OK rdepends_healthyR.ai ... OK rdepends_healthyR.ts ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_ldmppr ... OK rdepends_MachineShop ... OK rdepends_MLwrap ... OK rdepends_modeltime.ensemble ... OK rdepends_modeltime ... OK rdepends_modeltime.resample ... OK rdepends_parsnip ... OK rdepends_recipes ... OK rdepends_rules ... OK rdepends_shapr ... OK rdepends_tabnet ... OK rdepends_tdarec ... OK rdepends_textrecipes ... OK rdepends_themis ... OK rdepends_tidyclust ... OK rdepends_tidydann ... OK rdepends_tidyfit ... OK rdepends_tidymodels ... OK rdepends_tidysdm ... OK rdepends_tune ... OK rdepends_viralmodels ... OK rdepends_workflows ... OK rdepends_workflowsets ... OK