* using log directory 'd:/RCompile/CRANincoming/R-devel/delimtools.Rcheck' * using R Under development (unstable) (2025-09-18 r88857 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'delimtools/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'delimtools' version '0.2.1' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [208s] NOTE Maintainer: 'Pedro Bittencourt ' Suggests or Enhances not in mainstream repositories: bGMYC, splits Availability using Additional_repositories specification: bGMYC yes https://pedrosenna.github.io/drat/ splits yes https://r-forge.r-project.org/ Found the following (possibly) invalid URLs: URL: https://bioinfo.mnhn.fr/abi/public/abgd/ From: man/abgd_tbl.Rd Status: Error Message: Timeout was reached [bioinfo.mnhn.fr]: Failed to connect to bioinfo.mnhn.fr port 443 after 21016 ms: Could not connect to server URL: https://bioinfo.mnhn.fr/abi/public/abgd/abgdweb.html From: man/abgd_tbl.Rd inst/doc/install.html Status: Error Message: Timeout was reached [bioinfo.mnhn.fr]: Failed to connect to bioinfo.mnhn.fr port 443 after 42093 ms: Could not connect to server URL: https://bioinfo.mnhn.fr/abi/public/asap/ From: man/asap_tbl.Rd inst/doc/install.html Status: Error Message: Timeout was reached [bioinfo.mnhn.fr]: Connection timed out after 60015 milliseconds URL: https://bioinfo.mnhn.fr/abi/public/asap/asapweb.html From: man/asap_tbl.Rd Status: Error Message: Timeout was reached [bioinfo.mnhn.fr]: Operation timed out after 60015 milliseconds with 0 bytes received URL: https://splits.r-forge.r-project.org/ From: inst/doc/install.html Status: Error Message: Timeout was reached [splits.r-forge.r-project.org]: Operation timed out after 60015 milliseconds with 0 bytes received * checking package namespace information ... OK * checking package dependencies ... INFO Packages suggested but not available for checking: 'bGMYC', 'splits' * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'delimtools' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... INFO Packages unavailable to check Rd xrefs: 'bGMYC', 'splits' * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [21s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... [14s] OK * checking HTML version of manual ... OK * DONE Status: 1 NOTE