* using log directory 'd:/RCompile/CRANincoming/R-devel/deeptime.Rcheck'
* using R Under development (unstable) (2024-10-15 r87238 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'deeptime/DESCRIPTION' ... OK
* this is package 'deeptime' version '2.1.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [15s] NOTE
Maintainer: 'William Gearty <willgearty@gmail.com>'

Found the following (possibly) invalid URLs:
  URL: https://ngmdb.usgs.gov/fgdc_gds/geolsymstd.php
    From: man/geo_pattern.Rd
          man/grid.pattern_geo.Rd
          man/scale_fill_geopattern.Rd
          inst/doc/geo.html
    Status: 404
    Message: Not Found
  URL: https://ngmdb.usgs.gov/fgdc_gds/geolsymstd/fgdc-geolsym-patternchart.pdf
    From: man/geo_pattern.Rd
          man/scale_fill_geopattern.Rd
          inst/doc/geo.html
    Status: 404
    Message: Not Found
  URL: https://ngmdb.usgs.gov/fgdc_gds/index.php
    From: man/geo_pattern.Rd
          man/grid.pattern_geo.Rd
          inst/doc/geo.html
    Status: 404
    Message: Not Found
  URL: https://www.fgdc.gov/
    From: man/geo_pattern.Rd
          man/grid.pattern_geo.Rd
          inst/doc/geo.html
    Status: 404
    Message: Not Found

Size of tarball: 6491484 bytes
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'deeptime' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [19s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [31s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [38s] OK
  Running 'testthat.R' [38s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [52s] OK
* checking PDF version of manual ... [25s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 NOTE