* using log directory ‘/srv/hornik/tmp/CRAN_pretest/debiasedTrialEmulation.Rcheck’
* using R Under development (unstable) (2026-03-19 r89650)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 21.1.8 (3+b1)
    Debian flang version 21.1.8 (3+b1)
* running under: Debian GNU/Linux forky/sid
* using session charset: UTF-8
* current time: 2026-03-19 23:49:12 UTC
* checking for file ‘debiasedTrialEmulation/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘debiasedTrialEmulation’ version ‘0.1.1’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/3s] OK
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘debiasedTrialEmulation’ can be installed ... [6s/7s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... NOTE
Author field differs from that derived from Authors@R
  Author:    ‘Bingyu Zhang [aut, cre], Yiwen Lu [aut], Dazheng Zhang [aut], Yuqing Lei [aut], Tingyin Wang [aut], Siqi Chen [aut], Yong Chen [aut]’
  Authors@R: ‘Bingyu Zhang [aut, cre], Yiwen Lu [aut], Huilin Tang [aut], Dazheng Zhang [aut], Yuqing Lei [aut], Tingyin Wang [aut], Siqi Chen [aut], Yong Chen [aut]’

* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s/2s] OK
* checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the package can be unloaded cleanly ... [2s/2s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
* checking loading without being on the library search path ... [2s/2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [9s/9s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... NOTE
Rd file 'TTE_pipeline.Rd':
  \examples lines wider than 100 characters:
     xvars <- c("eth_cat", "age_cat", "sex", "cohort_entry_month", "obese", "pmca_index", "n_ed", "n_inpatient",
                "n_tests", "imm_date_diff_grp", "medical_1", "medical_2", "medical_3", "medical_4", "medical_5")
     TTE_pipeline(demo_data, xvars=xvars, yvars=yvars1, ncovars=ncovars1, ps_type="Matching", outcome_measure="RR")

Rd file 'calibrate_TTE.Rd':
  \examples lines wider than 100 characters:
     xvars <- c("eth_cat", "age_cat", "sex", "cohort_entry_month", "obese", "pmca_index", "n_ed", "n_inpatient",
                "n_tests", "imm_date_diff_grp", "medical_1", "medical_2", "medical_3", "medical_4", "medical_5")

These lines will be truncated in the PDF manual.
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... WARNING
  
  Note: significantly better compression could be obtained
        by using R CMD build --resave-data
                old_size new_size compress
  demo_data.rda    2.0Mb    1.7Mb       xz
* checking examples ... [6s/6s] OK
* checking PDF version of manual ... [2s/2s] OK
* checking HTML version of manual ... [1s/1s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 WARNING, 2 NOTEs