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Type 'q()' to quit R. > # options("testthat.default_reporter" = testthat::RStudioReporter) > library(dataquieR) > testthat::test_check("dataquieR") [1] "No data element mismatch" [1] "Data element mismatch" [ FAIL 0 | WARN 0 | SKIP 101 | PASS 508 ] ══ Skipped tests (101) ═════════════════════════════════════════════════════════ • On CRAN (99): 'test-acc_distributions.R:2:3', 'test-acc_distributions.R:123:3', 'test-acc_distributions.R:142:3', 'test-acc_distributions.R:166:3', 'test-acc_distributions.R:193:3', 'test-acc_end_digits.R:2:3', 'test-acc_end_digits.R:45:3', 'test-acc_end_digits.R:81:3', 'test-acc_end_digits.R:109:3', 'test-acc_loess.R:2:3', 'test-acc_loess.R:234:3', 'test-acc_loess.R:308:3', 'test-acc_loess.R:353:3', 'test-acc_loess.R:397:3', 'test-acc_loess.R:459:3', 'test-acc_loess.R:623:3', 'test-acc_loess.R:685:3', 'test-acc_loess.R:728:3', 'test-acc_loess.R:771:3', 'test-acc_loess.R:816:3', 'test-acc_loess.R:848:3', 'test-acc_margins.R:2:3', 'test-acc_margins.R:191:3', 'test-acc_multivariate_outlier.R:2:3', 'test-acc_multivariate_outlier.R:59:3', 'test-acc_shape_or_scale.R:2:3', 'test-acc_shape_or_scale.R:249:3', 'test-acc_univariate_outlier.R:2:3', 'test-acc_univariate_outlier.R:135:3', 'test-com_item_missingness.R:2:3', 'test-com_segment_missingness.R:218:3', 'test-com_segment_missingness.R:226:3', 'test-com_unit_missingness.R:2:3', 'test-con_contradictions.R:2:3', 'test-con_contradictions_redcap.R:2:3', 'test-con_contradictions_redcap.R:59:3', 'test-con_inadmissible_categorical.R:2:3', 'test-con_limit_deviations.R:2:3', 'test-con_limit_deviations.R:39:3', 'test-con_limit_deviations.R:91:3', 'test-con_limit_deviations.R:150:3', 'test-con_limit_deviations.R:230:3', 'test-con_limit_deviations.R:276:3', 'test-con_limit_deviations.R:322:3', 'test-con_limit_deviations.R:370:3', 'test-con_limit_deviations.R:425:3', 'test-con_limit_deviations.R:500:3', 'test-con_limit_deviations.R:535:3', 'test-con_limit_deviations.R:569:3', 'test-con_limit_deviations.R:608:3', 'test-dq_report2.R:2:3', 'test-dq_report_by.R:7:5', 'test-int_datatype_matrix.R:2:3', 'test-nres.R:2:3', 'test-plots.R:2:3', 'test-plots.R:35:3', 'test-plots.R:104:3', 'test-plots.R:144:3', 'test-plots.R:165:3', 'test-plots.R:182:3', 'test-plots.R:206:3', 'test-plots.R:262:3', 'test-plots.R:290:3', 'test-plots.R:386:3', 'test-plots.R:437:3', 'test-plots.R:466:3', 'test-prep_min_obs_level.R:2:3', 'test-prep_pmap.R:2:3', 'test-prep_save_report.R:2:3', 'test-prep_study2meta.R:2:3', 'test-prep_study2meta.R:55:3', 'test-prep_study2meta.R:127:3', 'test-print.R:2:3', 'test-print.R:113:3', 'test-pro_applicability_matrix.R:2:3', 'test-reflection.R:2:3', 'test-util_app_cd.R:2:3', 'test-util_app_dc.R:2:3', 'test-util_app_dl.R:2:3', 'test-util_app_ed.R:2:3', 'test-util_app_iac.R:2:3', 'test-util_app_iav.R:2:3', 'test-util_app_im.R:2:3', 'test-util_app_loess.R:2:3', 'test-util_app_mar.R:2:3', 'test-util_app_mol.R:2:3', 'test-util_app_ol.R:2:3', 'test-util_app_sm.R:2:3', 'test-util_app_sos.R:2:3', 'test-util_app_vc.R:2:3', 'test-util_combine_missing_lists.R:2:3', 'test-util_correct_variable_use.R:2:3', 'test-util_detect_cores.R:2:3', 'test-util_dichotomize.R:2:3', 'test-util_ensure_suggested.R:2:3', 'test-util_heatmap_1th.R:2:3', 'test-util_make_function.R:2:3', 'test-util_par_pmap.R:2:3', 'test-util_validate_known_meta.R:2:3' • TODO (2): 'test-int_unexp_elements.R:2:1', 'test-int_unexp_records.R:2:1' [ FAIL 0 | WARN 0 | SKIP 101 | PASS 508 ] Deleting unused snapshots: • acc_distributions/ecdf-plot-for-sbp0-ok.svg • acc_distributions/empty-cat5.svg • acc_distributions/few-float-values.svg • acc_distributions/non-consecutive-codes-work.svg • acc_end_digits/enddigits-plot-for-crp-0-ok.svg • acc_loess/loess-combined-plot-for-crp-0-both-ok.svg • acc_loess/loess-combined-plot-for-crp-0-combined-ok.svg • acc_loess/loess-combined-plot-for-crp-0-ok.svg • acc_loess/loess-combined-plot-for-crp-0-with-covars-ok.svg • acc_loess/loess-facets-plot-for-crp-0-both-ok.svg • acc_loess/loess-facets-plot-for-crp-0-facets-ok.svg • acc_loess/loess-facets-plot-for-crp-0-ok.svg • acc_loess/loess-facets-plot-for-crp-0-with-covars-ok.svg • acc_loess/loess-plot-for-crp-0-auto1-ok.svg • acc_loess/loess-plot-for-crp-0-auto2-ok.svg • acc_margins/margins-plot-for-crp-0-ok.svg • acc_multivariate_outlier/acc-mv-outliercrp0globheava0.svg • acc_shape_or_scale/shape-or-scale-plot-for-crp-0-ok.svg • com_item_missingness/item-missingness-plot-with-labels-ok.svg • com_item_missingness/item-missingness-plot-without-labels-ok.svg • com_segment_missingness/segment-missingness-plot-ok.svg • com_segment_missingness/segment-missingness-plot-r1-ok.svg • com_segment_missingness/segment-missingness-plot-r2-ok.svg • com_segment_missingness/segment-missingness-plot-r3-ok.svg • con_contradictions/one-cat-contradiction-plot-ok.svg • con_contradictions/summary-contradiction-plot-ok.svg • con_contradictions_redcap/one-cat-contradiction-plot-ok.svg • con_contradictions_redcap/summary-contradiction-plot-ok.svg • con_limit_deviations/con-limit-deviations-4-hists-1-val.svg • con_limit_deviations/con-limit-deviations-for-reverse-order-ok.svg • con_limit_deviations/con-limit-deviations-histgrms-misscds.svg • con_limit_deviations/con-limit-deviations-nothing-within.svg • con_limit_deviations/con-limit-deviations-quest-dt-0.svg • con_limit_deviations/con-limit-deviations-rev-order-w-1-0-max-ok.svg • int_datatype_matrix/intdtpart-interview.svg • int_datatype_matrix/intdtpart-lab.svg • int_datatype_matrix/intdtpart-phys-exam.svg • int_datatype_matrix/intdtpart-questionnaire.svg • int_datatype_matrix/intdtpart-study.svg • int_datatype_matrix/integrity-datatype.svg • plots/acc-distributions-def-edu0.svg • plots/acc-distributions-gr-dbp0.svg • plots/acc-multivariate-outlier-test-1.svg • plots/acc-univariate-outlier-r-dbp-0.svg • plots/con-contradictions-all-checks.svg • plots/con-contradictions-by-tag.svg • plots/con-contradictions-logical-age-checks-only.svg • plots/con-contradictions-rc-all-checks.svg • plots/con-contradictions-rc-by-tag.svg • plots/con-contradictions-rc-logical-checks-only.svg • plots/con-limit-deviations-all-item.svg • plots/con-limit-deviations-all-quest-dt.svg • plots/con-limit-deviations-all-sbp-0.svg • plots/con-limit-deviations-low-item.svg • plots/con-limit-deviations-low-quest-dt.svg • plots/con-limit-deviations-low-sbp-0.svg • plots/con-limit-deviations-upp-item.svg • plots/con-limit-deviations-upp-quest-dt.svg • plots/con-limit-deviations-upp-sbp-0.svg • plots/empty-reportsummarytable.svg • plots/heatmap-with-1-cat-var.svg • plots/heatmap-with-2-cat-vars-but-w-o-strata-vars.svg • plots/heatmap-with-2-cat-vars-but-w-strata-vars.svg • plots/int-datatype-matrix-reportsummarytable.svg • plots/int-datatype-matrix-segment-v50000.svg • plots/int-datatype-matrix.svg • plots/loess-def-dbp0.svg • plots/loess-fac-dbp0.svg • plots/margins-dbp0.svg • plots/margins-edu0.svg • plots/pro-applicability-matrix-reportsummarytable.svg • plots/pro-applicability-matrix-segment-v50000.svg • plots/pro-applicability-matrix.svg • plots/reportsummarytable-cont.svg • plots/shape-or-scale-dbp0.svg • print/app-ex-repsumtab.svg • print/im-empty-repsumtab.svg • print/im-ex1-repsumtab.svg • print/im-ex2-repsumtab.svg • pro_applicability_matrix/appmatrix-plot-for-segment-v10000-ok.svg • pro_applicability_matrix/appmatrix-plot-ok.svg • util_heatmap_1th/util-heatmap-1th-1.svg • util_heatmap_1th/util-heatmap-1th-2.svg • util_heatmap_1th/util-heatmap-1th-3.svg > > proc.time() user system elapsed 707.21 10.51 718.40