with_mock_dir("bioactivity-batch",{ # test_that("catch missing API", { # # Run register_ctxR(key = 'YOUR KEY', write = TRUE) prior to running tests # # #store env variable so tests don't overwrite # #tmp <- Sys.getenv("CTX_API_KEY") # #on.exit(Sys.setenv("CTX_API_KEY" = tmp)) # #if(Sys.getenv("CTX_API_KEY") == ""){ # # #set env variable temporarily for testing # # Sys.setenv("CTX_API_KEY" = "stored_api_key") # #} # expect_message(get_bioactivity_details_batch(DTXSID = c('DTXSID8031865'), verbose = TRUE), 'Using stored API key!') # expect_message(get_bioactivity_details_batch(DTXSID = c('DTXSID8031865'), API_key = 1, verbose = TRUE), 'Using stored API key!') # }) test_that('DTXSID/AEID errors', { expect_error(get_bioactivity_details_batch(DTXSID = 1, API_key = 'test_key'), 'Please input a character list for DTXSID!') expect_error(get_bioactivity_details_batch(DTXSID = list('first' = '1', 'second' = 2), API_key = 'test_key'), 'Please input a character list for DTXSID!') expect_error(get_bioactivity_details_batch(API_key = 'test_key'), 'Please input a list of DTXSIDs, AEIDs, SPIDs, or m4ids!') }) test_that('Rate limit warnings', { expect_warning(get_bioactivity_details_batch(DTXSID = c(''), API_key = ctx_key(), rate_limit = '0'), 'Setting rate limit to 0 seconds between requests!') expect_warning(get_bioactivity_details_batch(DTXSID = c(''), API_key = ctx_key(), rate_limit = -1), 'Setting rate limit to 0 seconds between requests!') }) test_that('Return data types', { expect_type(get_bioactivity_details_batch(DTXSID = c('DTXSID8031865'), API_key = ''), 'list') expect_type(get_bioactivity_details_batch(DTXSID = c(''), API_key = ctx_key()), 'list') expect_type(get_bioactivity_details_batch(AEID = c(1), API_key = 'test_key'), 'list') })})