R Under development (unstable) (2026-01-26 r89334 ucrt) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(ctsem)
Loading required package: Rcpp
> pdf(NULL)
>  test_check("ctsem")
starting worker pid=85464 on localhost:22158 at 13:18:18.760
starting worker pid=83860 on localhost:22158 at 13:18:18.824
Loading required package: data.table
Loading required package: data.table

Attaching package: 'data.table'


Attaching package: 'data.table'

The following object is masked from 'package:base':

    %notin%

The following object is masked from 'package:base':

    %notin%

starting worker pid=19180 on localhost:27513 at 13:18:38.003
starting worker pid=60576 on localhost:27513 at 13:18:38.040
Loading required package: data.table
Loading required package: data.table

Attaching package: 'data.table'


Attaching package: 'data.table'

The following object is masked from 'package:base':

    %notin%

The following object is masked from 'package:base':

    %notin%

starting worker pid=55828 on localhost:11065 at 13:18:41.594
starting worker pid=74616 on localhost:11065 at 13:18:41.869

SAMPLING FOR MODEL 'ctsm' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 0.005179 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 51.79 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: Iteration:   1 / 300 [  0%]  (Warmup)

SAMPLING FOR MODEL 'ctsm' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 0.007523 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 75.23 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: Iteration:   1 / 300 [  0%]  (Warmup)
Chain 1: Iteration:  20 / 300 [  6%]  (Warmup)
Chain 2: Iteration:  20 / 300 [  6%]  (Warmup)
Chain 1: Iteration:  40 / 300 [ 13%]  (Warmup)
Chain 2: Iteration:  40 / 300 [ 13%]  (Warmup)
Chain 1: Iteration:  60 / 300 [ 20%]  (Warmup)
Chain 2: Iteration:  60 / 300 [ 20%]  (Warmup)
Chain 1: Iteration:  80 / 300 [ 26%]  (Warmup)
Chain 2: Iteration:  80 / 300 [ 26%]  (Warmup)
Chain 1: Iteration: 100 / 300 [ 33%]  (Warmup)
Chain 2: Iteration: 100 / 300 [ 33%]  (Warmup)
Chain 1: Iteration: 120 / 300 [ 40%]  (Warmup)
Chain 2: Iteration: 120 / 300 [ 40%]  (Warmup)
Chain 1: Iteration: 140 / 300 [ 46%]  (Warmup)
Chain 1: Iteration: 151 / 300 [ 50%]  (Sampling)
Chain 2: Iteration: 140 / 300 [ 46%]  (Warmup)
Chain 2: Iteration: 151 / 300 [ 50%]  (Sampling)
Chain 1: Iteration: 170 / 300 [ 56%]  (Sampling)
Chain 2: Iteration: 170 / 300 [ 56%]  (Sampling)
Chain 1: Iteration: 190 / 300 [ 63%]  (Sampling)
Chain 2: Iteration: 190 / 300 [ 63%]  (Sampling)
Chain 1: Iteration: 210 / 300 [ 70%]  (Sampling)
Chain 1: Iteration: 230 / 300 [ 76%]  (Sampling)
Chain 2: Iteration: 210 / 300 [ 70%]  (Sampling)
Chain 2: Iteration: 230 / 300 [ 76%]  (Sampling)
Chain 1: Iteration: 250 / 300 [ 83%]  (Sampling)
Chain 2: Iteration: 250 / 300 [ 83%]  (Sampling)
Chain 1: Iteration: 270 / 300 [ 90%]  (Sampling)
Chain 1: Iteration: 290 / 300 [ 96%]  (Sampling)
Chain 2: Iteration: 270 / 300 [ 90%]  (Sampling)
Chain 1: Iteration: 300 / 300 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 19.44 seconds (Warm-up)
Chain 1:                10.892 seconds (Sampling)
Chain 1:                30.332 seconds (Total)
Chain 1: 
Chain 2: Iteration: 290 / 300 [ 96%]  (Sampling)
Chain 2: Iteration: 300 / 300 [100%]  (Sampling)
Chain 2: 
Chain 2:  Elapsed Time: 20.413 seconds (Warm-up)
Chain 2:                11.139 seconds (Sampling)
Chain 2:                31.552 seconds (Total)
Chain 2: 
[ FAIL 0 | WARN 0 | SKIP 16 | PASS 8 ]

══ Skipped tests (16) ══════════════════════════════════════════════════════════
• empty test (16): , , , , , , , , , , , , , , ,

[ FAIL 0 | WARN 0 | SKIP 16 | PASS 8 ]
> 
> proc.time()
   user  system elapsed 
  29.95    1.37   89.00