* using log directory ‘/srv/hornik/tmp/CRAN/csmpv.Rcheck’
* using R Under development (unstable) (2024-01-07 r85787)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 17.0.6 (3)
    Debian flang-new version 17.0.6 (3)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘csmpv/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘csmpv’ version ‘1.0.1’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/3s] NOTE
Maintainer: ‘Aixiang Jiang <aijiang@bccrc.ca>’

New submission

Possibly misspelled words in DESCRIPTION:
  Aoki (33:4)
  Hastie (25:4)
  Kassambara (27:4)
  LASSOplus (21:44)
  Therneau (26:4)
  XGBoost (20:29, 21:140)
  XGBtraining (20:9, 21:31, 21:54, 21:82)
  al (25:14, 26:16, 27:18, 28:16, 29:13, 33:12)
  et (25:11, 26:13, 27:15, 28:13, 29:10, 33:9)
  glmnet (17:149)

The Description field contains
  <https://arxiv.org/abs/1603.02754>, Aoki et al. (2023)
Please write arXiv ids as <arXiv:YYMM.NNNNN>.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘csmpv’ can be installed ... [8s/8s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s/2s] OK
* checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the package can be unloaded cleanly ... [2s/2s] OK
* checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
* checking loading without being on the library search path ... [2s/2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [11s/11s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [71s/36s] NOTE
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
LASSO2plus_XGBtraining 5.411  0.081   5.234
XGpred                 5.453  0.035   4.818
XGpred_predict         5.390  0.027   4.801
LASSO2                 4.975  0.064   5.039
Examples with CPU time > 2.5 times elapsed time
           user system elapsed  ratio
validation 0.96  0.043   0.037 27.108
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... [248s/113s] ERROR
Error(s) in re-building vignettes:
  ...
--- re-building ‘csmpv_vignette.rmd’ using rmarkdown

Quitting from lines 1126-1145 (csmpv_vignette.rmd)
Error: processing vignette 'csmpv_vignette.rmd' failed with diagnostics:
cannot change working directory
--- failed re-building ‘csmpv_vignette.rmd’

SUMMARY: processing the following file failed:
  ‘csmpv_vignette.rmd’

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [3s/3s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR, 2 NOTEs