downloading reverse dependencies ... downloading bcdata_0.5.1.tar.gz ... ok downloading citecorp_0.3.0.tar.gz ... ok downloading ckanr_0.7.0.tar.gz ... ok downloading codemetar_0.3.5.tar.gz ... ok downloading dams_0.3.0.tar.gz ... ok downloading duckduckr_1.0.0.tar.gz ... ok downloading elastic_1.2.0.tar.gz ... ok downloading geojsonio_0.11.3.tar.gz ... ok downloading gfonts_0.2.0.tar.gz ... ok downloading ghql_0.1.0.tar.gz ... ok downloading gistr_0.9.0.tar.gz ... ok downloading handlr_0.3.1.tar.gz ... ok downloading hereR_1.1.0.tar.gz ... ok downloading magmaR_1.0.4.tar.gz ... ok downloading mstrio_11.3.5.101.tar.gz ... ok downloading nasapower_4.2.5.tar.gz ... ok downloading natserv_1.0.0.tar.gz ... ok downloading opencage_0.2.2.tar.gz ... ok downloading osfr_0.2.9.tar.gz ... ok downloading pangaear_1.1.0.tar.gz ... ok downloading pct_0.10.0.tar.gz ... ok downloading postlightmercury_1.2.tar.gz ... ok downloading rATTAINS_1.0.1.tar.gz ... ok downloading rcrossref_1.2.0.tar.gz ... ok downloading rdatacite_0.5.4.tar.gz ... ok downloading rdryad_1.0.0.tar.gz ... ok downloading rerddap_1.2.1.tar.gz ... ok downloading rgbif_3.8.2.tar.gz ... ok downloading ritis_1.0.0.tar.gz ... ok downloading robotoolbox_1.4.tar.gz ... ok downloading rorcid_0.7.0.tar.gz ... ok downloading rredlist_1.0.0.tar.gz ... ok downloading rvertnet_0.8.4.tar.gz ... ok downloading sofa_0.4.0.tar.gz ... ok downloading solrium_1.2.0.tar.gz ... ok downloading spocc_1.2.3.tar.gz ... ok downloading taxize_0.10.0.tar.gz ... ok downloading tradestatistics_5.0.0.tar.gz ... ok downloading tremendousr_1.0.0.tar.gz ... ok downloading vcr_1.7.0.tar.gz ... ok downloading viafr_0.3.2.tar.gz ... ok downloading weatherOz_2.0.1.tar.gz ... ok downloading wikitaxa_0.4.0.tar.gz ... ok downloading worrms_0.4.3.tar.gz ... ok downloading clugenr_1.0.4.tar.gz ... ok downloading fauxpas_0.5.2.tar.gz ... ok downloading finch_0.4.0.tar.gz ... ok downloading nhdR_0.6.1.tar.gz ... ok downloading webmockr_2.2.0.tar.gz ... ok installing dependencies ‘apsimx’, ‘codemeta’, ‘crul’, ‘details’, ‘dittoSeq’, ‘EML’, ‘flexpolyline’, ‘gistr’, ‘graphql’, ‘handlr’, ‘mailR’, ‘natserv’, ‘rcrossref’, ‘rebird’, ‘ridigbio’, ‘ritis’, ‘rotl’, ‘rredlist’, ‘rvertnet’, ‘solrium’, ‘stplanr’, ‘taxize’, ‘terra’, ‘tibblify’, ‘webmockr’, ‘WikidataR’, ‘wikilake’, ‘wikitaxa’, ‘worrms’ also installing the dependencies ‘od’, ‘WikidataQueryServiceR’, ‘emld’ begin installing package ‘od’ begin installing package ‘WikidataQueryServiceR’ begin installing package ‘emld’ begin installing package ‘codemeta’ begin installing package ‘details’ begin installing package ‘graphql’ begin installing package ‘flexpolyline’ begin installing package ‘dittoSeq’ begin installing package ‘tibblify’ begin installing package ‘rebird’ begin installing package ‘rotl’ begin installing package ‘terra’ begin installing package ‘apsimx’ begin installing package ‘mailR’ begin installing package ‘wikilake’ begin installing package ‘webmockr’ begin installing package ‘crul’ * installing *source* package ‘codemeta’ ... ** this is package ‘codemeta’ version ‘0.1.1’ ** package ‘codemeta’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (codemeta) * installing *source* package ‘WikidataQueryServiceR’ ... ** this is package ‘WikidataQueryServiceR’ version ‘1.0.0’ ** package ‘WikidataQueryServiceR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (WikidataQueryServiceR) begin installing package ‘WikidataR’ * installing *source* package ‘od’ ... ** this is package ‘od’ version ‘0.5.1’ ** package ‘od’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (od) begin installing package ‘stplanr’ * installing *source* package ‘details’ ... ** this is package ‘details’ version ‘0.4.0’ ** package ‘details’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (details) * installing *source* package ‘mailR’ ... ** this is package ‘mailR’ version ‘0.8’ ** package ‘mailR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mailR) * installing *source* package ‘emld’ ... ** this is package ‘emld’ version ‘0.5.1’ ** package ‘emld’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (emld) begin installing package ‘EML’ * installing *source* package ‘rebird’ ... ** this is package ‘rebird’ version ‘1.3.0’ ** package ‘rebird’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rebird) * installing *source* package ‘wikilake’ ... ** this is package ‘wikilake’ version ‘0.7.0’ ** package ‘wikilake’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wikilake) * installing *source* package ‘rotl’ ... ** this is package ‘rotl’ version ‘3.1.0’ ** package ‘rotl’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rotl) * installing *source* package ‘WikidataR’ ... ** this is package ‘WikidataR’ version ‘2.3.3’ ** package ‘WikidataR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (WikidataR) * installing *source* package ‘crul’ ... ** this is package ‘crul’ version ‘1.6.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crul) begin installing package ‘gistr’ begin installing package ‘solrium’ begin installing package ‘rcrossref’ begin installing package ‘rvertnet’ begin installing package ‘handlr’ begin installing package ‘rredlist’ begin installing package ‘worrms’ begin installing package ‘natserv’ begin installing package ‘wikitaxa’ * installing *source* package ‘stplanr’ ... ** this is package ‘stplanr’ version ‘1.2.3’ ** package ‘stplanr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stplanr) * installing *source* package ‘worrms’ ... ** this is package ‘worrms’ version ‘0.4.3’ ** package ‘worrms’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (worrms) * installing *source* package ‘wikitaxa’ ... ** this is package ‘wikitaxa’ version ‘0.4.0’ ** package ‘wikitaxa’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wikitaxa) * installing *source* package ‘EML’ ... ** this is package ‘EML’ version ‘2.0.6.1’ ** package ‘EML’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EML) * installing *source* package ‘flexpolyline’ ... ** this is package ‘flexpolyline’ version ‘0.3.0’ ** package ‘flexpolyline’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRfYtLS/R.INSTALL22ce3b4dfc7ff9/flexpolyline/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c flexpolyline.cpp -o flexpolyline.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o flexpolyline.so RcppExports.o flexpolyline.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRfYtLS/R.INSTALL22ce3b4dfc7ff9/flexpolyline/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-flexpolyline/00new/flexpolyline/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flexpolyline) * installing *source* package ‘tibblify’ ... ** this is package ‘tibblify’ version ‘0.3.1’ ** package ‘tibblify’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpSc7RWc/R.INSTALL22ce4c7991996f/tibblify/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c add-value.c -o add-value.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c collector.c -o collector.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c finalize.c -o finalize.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c globals.c -o globals.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c guess-utils.c -o guess-utils.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c parse-spec.c -o parse-spec.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rlang-rcc.cpp -o rlang-rcc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rlang.c -o rlang.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tibblify-vctrs-private.c -o tibblify-vctrs-private.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tibblify-vctrs-public.c -o tibblify-vctrs-public.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tibblify2.c -o tibblify2.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vctrs-type-info.c -o vctrs-type-info.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vctrs-unspecified.c -o vctrs-unspecified.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vctrs-utils-dispatch.c -o vctrs-utils-dispatch.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I./rlang -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/vctrs/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -DHAVE_VISIBILITY_ATTRIBUTE -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vctrs-utils.c -o vctrs-utils.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o tibblify.so add-value.o collector.o finalize.o globals.o guess-utils.o init.o parse-spec.o rlang-rcc.o rlang.o tibblify-vctrs-private.o tibblify-vctrs-public.o tibblify2.o utils.o vctrs-type-info.o vctrs-unspecified.o vctrs-utils-dispatch.o vctrs-utils.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpSc7RWc/R.INSTALL22ce4c7991996f/tibblify/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-tibblify/00new/tibblify/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tibblify) * installing *source* package ‘rredlist’ ... ** this is package ‘rredlist’ version ‘1.0.0’ ** package ‘rredlist’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rredlist) * installing *source* package ‘natserv’ ... ** this is package ‘natserv’ version ‘1.0.0’ ** package ‘natserv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (natserv) * installing *source* package ‘gistr’ ... ** this is package ‘gistr’ version ‘0.9.0’ ** package ‘gistr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gistr) * installing *source* package ‘handlr’ ... ** this is package ‘handlr’ version ‘0.3.1’ ** package ‘handlr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (handlr) * installing *source* package ‘webmockr’ ... ** this is package ‘webmockr’ version ‘2.2.0’ ** package ‘webmockr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (webmockr) * installing *source* package ‘rvertnet’ ... ** this is package ‘rvertnet’ version ‘0.8.4’ ** package ‘rvertnet’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rvertnet) * installing *source* package ‘solrium’ ... ** this is package ‘solrium’ version ‘1.2.0’ ** package ‘solrium’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (solrium) begin installing package ‘ritis’ * installing *source* package ‘rcrossref’ ... ** this is package ‘rcrossref’ version ‘1.2.0’ ** package ‘rcrossref’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rcrossref) * installing *source* package ‘ritis’ ... ** this is package ‘ritis’ version ‘1.0.0’ ** package ‘ritis’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ritis) begin installing package ‘taxize’ * installing *source* package ‘apsimx’ ... ** this is package ‘apsimx’ version ‘2.8.235’ ** package ‘apsimx’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (apsimx) * installing *source* package ‘graphql’ ... ** this is package ‘graphql’ version ‘1.5.3’ ** package ‘graphql’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiefJWU/R.INSTALL22ce2d18085040/graphql/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c dump_json_ast.cpp -o dump_json_ast.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/Ast.cpp -o libgraphqlparser/Ast.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/GraphQLParser.cpp -o libgraphqlparser/GraphQLParser.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/JsonVisitor.cpp -o libgraphqlparser/JsonVisitor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/lexer.cpp -o libgraphqlparser/lexer.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/parser.tab.cpp -o libgraphqlparser/parser.tab.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/c/GraphQLParser.cpp -o libgraphqlparser/c/GraphQLParser.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/c/GraphQLAst.cpp -o libgraphqlparser/c/GraphQLAst.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/c/GraphQLAstNode.cpp -o libgraphqlparser/c/GraphQLAstNode.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/c/GraphQLAstToJSON.cpp -o libgraphqlparser/c/GraphQLAstToJSON.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -Ilibgraphqlparser -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c libgraphqlparser/c/GraphQLAstVisitor.cpp -o libgraphqlparser/c/GraphQLAstVisitor.o ar rcs libgraphqlparser/libstatgraphparser.a libgraphqlparser/Ast.o libgraphqlparser/GraphQLParser.o libgraphqlparser/JsonVisitor.o libgraphqlparser/lexer.o libgraphqlparser/parser.tab.o libgraphqlparser/c/GraphQLParser.o libgraphqlparser/c/GraphQLAst.o libgraphqlparser/c/GraphQLAstNode.o libgraphqlparser/c/GraphQLAstToJSON.o libgraphqlparser/c/GraphQLAstVisitor.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o graphql.so RcppExports.o dump_json_ast.o -Llibgraphqlparser -lstatgraphparser -L/home/hornik/tmp/R/lib -lR rm -f libgraphqlparser/Ast.o libgraphqlparser/GraphQLParser.o libgraphqlparser/JsonVisitor.o libgraphqlparser/lexer.o libgraphqlparser/parser.tab.o libgraphqlparser/c/GraphQLParser.o libgraphqlparser/c/GraphQLAst.o libgraphqlparser/c/GraphQLAstNode.o libgraphqlparser/c/GraphQLAstToJSON.o libgraphqlparser/c/GraphQLAstVisitor.o libgraphqlparser/libstatgraphparser.a make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiefJWU/R.INSTALL22ce2d18085040/graphql/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-graphql/00new/graphql/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graphql) * installing *source* package ‘dittoSeq’ ... ** this is package ‘dittoSeq’ version ‘1.20.0’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dittoSeq) * installing *source* package ‘taxize’ ... ** this is package ‘taxize’ version ‘0.10.0’ ** package ‘taxize’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (taxize) * installing *source* package ‘terra’ ... ** this is package ‘terra’ version ‘1.8-60’ ** package ‘terra’ successfully unpacked and MD5 sums checked ** using staged installation configure: CC: gcc-14 -std=gnu23 configure: CXX: g++-14 -std=gnu++17 checking for gdal-config... /usr/bin/gdal-config checking gdal-config usability... yes configure: GDAL: 3.10.3 checking GDAL version >= 2.0.1... yes checking for gcc... gcc-14 -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-14 -std=gnu23 accepts -g... yes checking for gcc-14 -std=gnu23 option to enable C11 features... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for gdal.h... yes checking GDAL: linking with --libs only... yes checking GDAL: /usr/share/gdal/pcs.csv readable... no checking GDAL: checking whether PROJ is available for linking:... yes checking GDAL: checking whether PROJ is available for running:... yes configure: GDAL: 3.10.3 configure: pkg-config proj exists, will use it configure: using proj.h. configure: PROJ: 9.6.0 checking PROJ: checking whether PROJ and sqlite3 are available for linking:... yes checking for geos-config... /usr/bin/geos-config checking geos-config usability... yes configure: GEOS: 3.13.1 checking GEOS version >= 3.4.0... yes checking for geos_c.h... yes checking geos: linking with -L/usr/lib/x86_64-linux-gnu -lgeos_c... yes checking Intel TBB exists:... yes checking tbb available for compiling and linking:... yes configure: Package CPP flags: -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB configure: Package LIBS: -ltbb -lproj -L/usr/lib/x86_64-linux-gnu -lgdal -L/usr/lib/x86_64-linux-gnu -lgeos_c configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmprQLGMs/R.INSTALL22ce4a51bb488f/terra/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppFunctions.cpp -o RcppFunctions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppModule.cpp -o RcppModule.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c arith.cpp -o arith.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c crs.cpp -o crs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distRaster.cpp -o distRaster.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distValueRaster.cpp -o distValueRaster.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distVector.cpp -o distVector.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distance.cpp -o distance.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c extract.cpp -o extract.o In file included from /usr/include/x86_64-linux-gnu/c++/14/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/bits/alloc_traits.h:39, from /usr/include/c++/14/ext/alloc_traits.h:34, from /usr/include/c++/14/bits/hashtable_policy.h:39, from /usr/include/c++/14/bits/hashtable.h:35, from /usr/include/c++/14/bits/unordered_map.h:33, from /usr/include/c++/14/unordered_map:41, from /usr/include/c++/14/functional:63, from extract.cpp:18: In member function ‘void std::__new_allocator<_Tp>::deallocate(_Tp*, size_type) [with _Tp = std::__cxx11::basic_string]’, inlined from ‘static void std::allocator_traits >::deallocate(allocator_type&, pointer, size_type) [with _Tp = std::__cxx11::basic_string]’ at /usr/include/c++/14/bits/alloc_traits.h:550:23, inlined from ‘void std::_Vector_base<_Tp, _Alloc>::_M_deallocate(pointer, std::size_t) [with _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ at /usr/include/c++/14/bits/stl_vector.h:389:19, inlined from ‘void std::_Vector_base<_Tp, _Alloc>::_M_deallocate(pointer, std::size_t) [with _Tp = std::function&, long unsigned int, long unsigned int)>; _Alloc = std::allocator&, long unsigned int, long unsigned int)> >]’ at /usr/include/c++/14/bits/stl_vector.h:385:7, inlined from ‘std::_Vector_base<_Tp, _Alloc>::~_Vector_base() [with _Tp = std::function&, long unsigned int, long unsigned int)>; _Alloc = std::allocator&, long unsigned int, long unsigned int)> >]’ at /usr/include/c++/14/bits/stl_vector.h:368:15, inlined from ‘std::vector<_Tp, _Alloc>::~vector() [with _Tp = std::function&, long unsigned int, long unsigned int)>; _Alloc = std::allocator&, long unsigned int, long unsigned int)> >]’ at /usr/include/c++/14/bits/stl_vector.h:738:7, inlined from ‘std::vector SpatRaster::extractVectorFlat(SpatVector, std::vector >, bool, bool, bool, std::string, bool, bool, bool, bool, SpatOptions&)’ at extract.cpp:1232:1: /usr/include/c++/14/bits/new_allocator.h:172:33: warning: ‘void operator delete(void*, std::size_t)’ called on pointer ‘’ with nonzero offset [1, 9223372036854775776] [-Wfree-nonheap-object] 172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n)); | ^ In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = std::function&, long unsigned int, long unsigned int)>]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = std::function&, long unsigned int, long unsigned int)>]’ at /usr/include/c++/14/bits/alloc_traits.h:515:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = std::function&, long unsigned int, long unsigned int)>; _Alloc = std::allocator&, long unsigned int, long unsigned int)> >]’ at /usr/include/c++/14/bits/stl_vector.h:380:33, inlined from ‘void std::vector<_Tp, _Alloc>::_M_default_append(size_type) [with _Tp = std::function&, long unsigned int, long unsigned int)>; _Alloc = std::allocator&, long unsigned int, long unsigned int)> >]’ at /usr/include/c++/14/bits/vector.tcc:834:45, inlined from ‘void std::vector<_Tp, _Alloc>::resize(size_type) [with _Tp = std::function&, long unsigned int, long unsigned int)>; _Alloc = std::allocator&, long unsigned int, long unsigned int)> >]’ at /usr/include/c++/14/bits/stl_vector.h:1016:21, inlined from ‘std::vector SpatRaster::extractVectorFlat(SpatVector, std::vector >, bool, bool, bool, std::string, bool, bool, bool, bool, SpatOptions&)’ at extract.cpp:1150:16: /usr/include/c++/14/bits/new_allocator.h:151:55: note: returned from ‘void* operator new(std::size_t)’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c file_utils.cpp -o file_utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c focal.cpp -o focal.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gcp.cpp -o gcp.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gdal_algs.cpp -o gdal_algs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gdal_multidimensional.cpp -o gdal_multidimensional.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gdalio.cpp -o gdalio.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c geodesic.c -o geodesic.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c geos_methods.cpp -o geos_methods.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c geosphere.cpp -o geosphere.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c math_utils.cpp -o math_utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mediancut.cpp -o mediancut.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c memory.cpp -o memory.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c movingWindow.cpp -o movingWindow.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ncdf.cpp -o ncdf.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nearest.cpp -o nearest.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c patches.cpp -o patches.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ram.cpp -o ram.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c raster_methods.cpp -o raster_methods.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c raster_stats.cpp -o raster_stats.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rasterize.cpp -o rasterize.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c read.cpp -o read.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c read_gdal.cpp -o read_gdal.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c read_ogr.cpp -o read_ogr.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sample.cpp -o sample.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sort.cpp -o sort.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spatBase.cpp -o spatBase.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spatDataframe.cpp -o spatDataframe.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spatFactor.cpp -o spatFactor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spatRaster.cpp -o spatRaster.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spatRasterMultiple.cpp -o spatRasterMultiple.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spatSources.cpp -o spatSources.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spatTime.cpp -o spatTime.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spatVector.cpp -o spatVector.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spatVector2.cpp -o spatVector2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c string_utils.cpp -o string_utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c surfArea.cpp -o surfArea.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c table_utils.cpp -o table_utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c vecmath.cpp -o vecmath.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c vecmathse.cpp -o vecmathse.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c vector_methods.cpp -o vector_methods.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c watershed_internal.cpp -o watershed_internal.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c write.cpp -o write.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c write_gdal.cpp -o write_gdal.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DHAVE_PROJ_H -I/usr/include/gdal -I/usr/include -DHAVE_TBB -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c write_ogr.cpp -o write_ogr.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o terra.so RcppExports.o RcppFunctions.o RcppModule.o arith.o crs.o distRaster.o distValueRaster.o distVector.o distance.o extract.o file_utils.o focal.o gcp.o gdal_algs.o gdal_multidimensional.o gdalio.o geodesic.o geos_methods.o geosphere.o math_utils.o mediancut.o memory.o movingWindow.o ncdf.o nearest.o patches.o ram.o raster_methods.o raster_stats.o rasterize.o read.o read_gdal.o read_ogr.o sample.o sort.o spatBase.o spatDataframe.o spatFactor.o spatRaster.o spatRasterMultiple.o spatSources.o spatTime.o spatVector.o spatVector2.o string_utils.o surfArea.o table_utils.o vecmath.o vecmathse.o vector_methods.o watershed_internal.o write.o write_gdal.o write_ogr.o -ltbb -lproj -L/usr/lib/x86_64-linux-gnu -lgdal -L/usr/lib/x86_64-linux-gnu -lgeos_c -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmprQLGMs/R.INSTALL22ce4a51bb488f/terra/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-terra/00new/terra/libs ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘sds’ with signature ‘x="stars"’: no definition for class “stars” in method for ‘sds’ with signature ‘x="stars_proxy"’: no definition for class “stars_proxy” in method for ‘svc’ with signature ‘x="sf"’: no definition for class “sf” in method for ‘coerce’ with signature ‘"stars","SpatRasterDataset"’: no definition for class “stars” in method for ‘coerce’ with signature ‘"ggmap","SpatRaster"’: no definition for class “ggmap” in method for ‘coerce’ with signature ‘"sf","SpatRaster"’: no definition for class “sf” in method for ‘coerce’ with signature ‘"sf","SpatVector"’: no definition for class “sf” in method for ‘coerce’ with signature ‘"sfc","SpatVector"’: no definition for class “sfc” in method for ‘coerce’ with signature ‘"sfg","SpatVector"’: no definition for class “sfg” in method for ‘coerce’ with signature ‘"XY","SpatVector"’: no definition for class “XY” in method for ‘coerce’ with signature ‘"im","SpatRaster"’: no definition for class “im” in method for ‘coerce’ with signature ‘"SpatVector","Spatial"’: no definition for class “Spatial” in method for ‘coerce’ with signature ‘"Spatial","SpatVector"’: no definition for class “Spatial” in method for ‘coerce’ with signature ‘"SpatialGrid","SpatRaster"’: no definition for class “SpatialGrid” in method for ‘coerce’ with signature ‘"SpatialPixels","SpatRaster"’: no definition for class “SpatialPixels” in method for ‘crs’ with signature ‘"sf"’: no definition for class “sf” Creating a generic function for ‘ncol’ from package ‘base’ in package ‘terra’ in method for ‘distance’ with signature ‘x="SpatRaster",y="sf"’: no definition for class “sf” in method for ‘ext’ with signature ‘x="sf"’: no definition for class “sf” in method for ‘ext’ with signature ‘x="bbox"’: no definition for class “bbox” in method for ‘ext’ with signature ‘x="Extent"’: no definition for class “Extent” in method for ‘ext’ with signature ‘x="Raster"’: no definition for class “Raster” in method for ‘ext’ with signature ‘x="Spatial"’: no definition for class “Spatial” in method for ‘extract’ with signature ‘x="SpatRaster",y="sf"’: no definition for class “sf” in method for ‘mask’ with signature ‘x="SpatRaster",mask="sf"’: no definition for class “sf” in method for ‘points’ with signature ‘x="sf"’: no definition for class “sf” in method for ‘lines’ with signature ‘x="sf"’: no definition for class “sf” in method for ‘polys’ with signature ‘x="sf"’: no definition for class “sf” in method for ‘polys’ with signature ‘x="leaflet"’: no definition for class “leaflet” in method for ‘lines’ with signature ‘x="leaflet"’: no definition for class “leaflet” in method for ‘points’ with signature ‘x="leaflet"’: no definition for class “leaflet” in method for ‘rast’ with signature ‘x="stars"’: no definition for class “stars” in method for ‘rast’ with signature ‘x="stars_proxy"’: no definition for class “stars_proxy” in method for ‘rasterize’ with signature ‘x="sf",y="SpatRaster"’: no definition for class “sf” Creating a generic function for ‘rowSums’ from package ‘base’ in package ‘terra’ Creating a generic function for ‘colSums’ from package ‘base’ in package ‘terra’ Creating a generic function for ‘rowMeans’ from package ‘base’ in package ‘terra’ Creating a generic function for ‘colMeans’ from package ‘base’ in package ‘terra’ in method for ‘show’ with signature ‘"Rcpp_SpatDataFrame"’: no definition for class “Rcpp_SpatDataFrame” in method for ‘show’ with signature ‘"Rcpp_SpatCategories"’: no definition for class “Rcpp_SpatCategories” in method for ‘geomtype’ with signature ‘x="Spatial"’: no definition for class “Spatial” Creating a generic function for ‘identical’ from package ‘base’ in package ‘terra’ in method for ‘vect’ with signature ‘x="Spatial"’: no definition for class “Spatial” in method for ‘vect’ with signature ‘x="sf"’: no definition for class “sf” in method for ‘vect’ with signature ‘x="sfc"’: no definition for class “sfc” in method for ‘vect’ with signature ‘x="XY"’: no definition for class “XY” Creating a generic function for ‘unserialize’ from package ‘base’ in package ‘terra’ Creating a generic function for ‘readRDS’ from package ‘base’ in package ‘terra’ ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (terra) begin installing package ‘ridigbio’ * installing *source* package ‘ridigbio’ ... ** this is package ‘ridigbio’ version ‘0.4.1’ ** package ‘ridigbio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ridigbio) checking crul_1.6.0.tar.gz ... checking bcdata_0.5.1.tar.gz ... checking citecorp_0.3.0.tar.gz ... checking codemetar_0.3.5.tar.gz ... checking ckanr_0.7.0.tar.gz ... checking duckduckr_1.0.0.tar.gz ... checking dams_0.3.0.tar.gz ... checking elastic_1.2.0.tar.gz ... checking geojsonio_0.11.3.tar.gz ... checking gfonts_0.2.0.tar.gz ... checking ghql_0.1.0.tar.gz ... checking gistr_0.9.0.tar.gz ... checking handlr_0.3.1.tar.gz ... checking hereR_1.1.0.tar.gz ... checking magmaR_1.0.4.tar.gz ... checking mstrio_11.3.5.101.tar.gz ... checking nasapower_4.2.5.tar.gz ... checking natserv_1.0.0.tar.gz ... checking opencage_0.2.2.tar.gz ... checking osfr_0.2.9.tar.gz ... checking pangaear_1.1.0.tar.gz ... checking pct_0.10.0.tar.gz ... checking postlightmercury_1.2.tar.gz ... checking rATTAINS_1.0.1.tar.gz ... checking rcrossref_1.2.0.tar.gz ... checking rdatacite_0.5.4.tar.gz ... checking rdryad_1.0.0.tar.gz ... checking rerddap_1.2.1.tar.gz ... checking sofa_0.4.0.tar.gz ... checking worrms_0.4.3.tar.gz ... checking tradestatistics_5.0.0.tar.gz ... checking robotoolbox_1.4.tar.gz ... checking weatherOz_2.0.1.tar.gz ... checking rredlist_1.0.0.tar.gz ... checking clugenr_1.0.4.tar.gz ... checking webmockr_2.2.0.tar.gz ... checking vcr_1.7.0.tar.gz ... checking taxize_0.10.0.tar.gz ... checking nhdR_0.6.1.tar.gz ... checking tremendousr_1.0.0.tar.gz ... checking fauxpas_0.5.2.tar.gz ... checking solrium_1.2.0.tar.gz ... checking rvertnet_0.8.4.tar.gz ... checking wikitaxa_0.4.0.tar.gz ... checking finch_0.4.0.tar.gz ... checking rorcid_0.7.0.tar.gz ... checking spocc_1.2.3.tar.gz ... checking rgbif_3.8.2.tar.gz ... checking ritis_1.0.0.tar.gz ... checking viafr_0.3.2.tar.gz ... Depends: Package: crul Imports: curl (>= 3.3), R6 (>= 2.2.0), urltools (>= 1.6.0), httpcode (>= 0.2.0), jsonlite, mime, rlang, lifecycle Timings: user system elapsed crul 60.696 6.286 66.138 Results: Check status summary: ERROR NOTE OK Source packages 0 1 0 Reverse depends 13 6 30 Check results summary: crul ... NOTE * checking CRAN incoming feasibility ... [10s/10s] NOTE rdepends_bcdata ... OK rdepends_citecorp ... ERROR * checking tests ... [4s/4s] ERROR rdepends_ckanr ... OK rdepends_clugenr ... OK rdepends_codemetar ... NOTE * checking Rd cross-references ... NOTE rdepends_dams ... OK rdepends_duckduckr ... OK rdepends_elastic ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_fauxpas ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_finch ... OK rdepends_geojsonio ... OK rdepends_gfonts ... ERROR * checking Rd files ... [0s/0s] NOTE * checking tests ... [3s/3s] ERROR rdepends_ghql ... OK rdepends_gistr ... OK rdepends_handlr ... OK rdepends_hereR ... OK rdepends_magmaR ... ERROR * checking tests ... [4s/4s] ERROR * checking re-building of vignette outputs ... [5s/6s] ERROR rdepends_mstrio ... OK rdepends_nasapower ... OK rdepends_natserv ... OK rdepends_nhdR ... OK rdepends_opencage ... OK rdepends_osfr ... OK rdepends_pangaear ... ERROR * checking tests ... [4s/4s] ERROR rdepends_pct ... OK rdepends_postlightmercury ... OK rdepends_rATTAINS ... ERROR * checking tests ... [4s/4s] ERROR * checking re-building of vignette outputs ... [2s/2s] ERROR rdepends_rcrossref ... ERROR * checking tests ... [13s/110s] ERROR rdepends_rdatacite ... ERROR * checking tests ... [3s/3s] ERROR rdepends_rdryad ... OK rdepends_rerddap ... OK rdepends_rgbif ... ERROR * checking tests ... [13s/14s] ERROR rdepends_ritis ... ERROR * checking tests ... [4s/4s] ERROR rdepends_robotoolbox ... OK rdepends_rorcid ... OK rdepends_rredlist ... OK rdepends_rvertnet ... OK rdepends_sofa ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_solrium ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_spocc ... NOTE * checking Rd cross-references ... NOTE rdepends_taxize ... OK rdepends_tradestatistics ... OK rdepends_tremendousr ... OK rdepends_vcr ... ERROR * checking tests ... [6s/9s] ERROR rdepends_viafr ... OK rdepends_weatherOz ... ERROR * checking tests ... [29s/28s] ERROR rdepends_webmockr ... OK rdepends_wikitaxa ... ERROR * checking tests ... [2s/2s] ERROR rdepends_worrms ... ERROR * checking tests ... [7s/7s] ERROR Check results changes: Package: citecorp Check: tests New result: ERROR Package: gfonts Check: tests New result: ERROR Package: magmaR Check: re-building of vignette outputs New result: ERROR Package: magmaR Check: tests New result: ERROR Package: osfr Check: CRAN incoming feasibility Old result: NOTE Package: pangaear Check: tests New result: ERROR Package: postlightmercury Check: CRAN incoming feasibility Old result: NOTE Package: rATTAINS Check: re-building of vignette outputs New result: ERROR Package: rATTAINS Check: tests New result: ERROR Package: rcrossref Check: tests New result: ERROR Package: rdatacite Check: tests New result: ERROR Package: rgbif Check: tests New result: ERROR Package: ritis Check: tests New result: ERROR Package: vcr Check: DESCRIPTION meta-information Old result: NOTE New result: OK Package: vcr Check: tests New result: ERROR Package: wikitaxa Check: tests New result: ERROR Package: worrms Check: tests New result: ERROR