* using log directory 'd:/RCompile/CRANincoming/R-devel/crt2power.Rcheck'
* using R Under development (unstable) (2024-06-13 r86735 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'crt2power/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'crt2power' version '1.0.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Melody Owen <melody.owen@yale.edu>'

New submission
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'crt2power' can be installed ... WARNING
Found the following significant warnings:
  Warning: replacing previous import 'MASS::select' by 'dplyr::select' when loading 'crt2power'
  Warning: replacing previous import 'dplyr::group_rows' by 'kableExtra::group_rows' when loading 'crt2power'
  Warning: replacing previous import 'pracma::gradient' by 'rootSolve::gradient' when loading 'crt2power'
  Warning: replacing previous import 'pracma::hessian' by 'rootSolve::hessian' when loading 'crt2power'
  Warning: replacing previous import 'dplyr::lag' by 'stats::lag' when loading 'crt2power'
  Warning: replacing previous import 'dplyr::filter' by 'stats::filter' when loading 'crt2power'
See 'd:/RCompile/CRANincoming/R-devel/crt2power.Rcheck/00install.out' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... WARNING
Dependence on R version '4.3.1' not with patchlevel 0
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [14s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... NOTE
Rd file 'calc_K_comb_outcome.Rd':
  \examples lines wider than 100 characters:
     calc_K_comb_outcome(power = 0.8, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0. ... [TRUNCATED]

Rd file 'calc_K_conj_test.Rd':
  \examples lines wider than 100 characters:
     calc_K_conj_test(power = 0.8, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.025 ... [TRUNCATED]

Rd file 'calc_K_disj_2dftest.Rd':
  \examples lines wider than 100 characters:
     calc_K_disj_2dftest(power = 0.8, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0. ... [TRUNCATED]

Rd file 'calc_K_pval_adj.Rd':
  \examples lines wider than 100 characters:
     calc_K_pval_adj(power = 0.8, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.025, ... [TRUNCATED]

Rd file 'calc_K_single_1dftest.Rd':
  \examples lines wider than 100 characters:
     calc_K_single_1dftest(power = 0.8, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 =  ... [TRUNCATED]

Rd file 'calc_m_comb_outcome.Rd':
  \examples lines wider than 100 characters:
     calc_m_comb_outcome(power = 0.8, K = 15, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.0 ... [TRUNCATED]

Rd file 'calc_m_conj_test.Rd':
  \examples lines wider than 100 characters:
     calc_m_conj_test(power = 0.8, K = 15, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.025, ... [TRUNCATED]

Rd file 'calc_m_disj_2dftest.Rd':
  \examples lines wider than 100 characters:
     calc_m_disj_2dftest(power = 0.8, K = 15, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.0 ... [TRUNCATED]

Rd file 'calc_m_pval_adj.Rd':
  \examples lines wider than 100 characters:
     calc_m_pval_adj(power = 0.8, K = 15, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.025,  ... [TRUNCATED]

Rd file 'calc_m_single_1dftest.Rd':
  \examples lines wider than 100 characters:
     calc_m_single_1dftest(power = 0.8, K = 15, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0 ... [TRUNCATED]

Rd file 'calc_pwr_comb_outcome.Rd':
  \examples lines wider than 100 characters:
     calc_pwr_comb_outcome(K = 15, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.025 ... [TRUNCATED]

Rd file 'calc_pwr_conj_test.Rd':
  \examples lines wider than 100 characters:
     calc_pwr_conj_test(K = 15, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.025, r ... [TRUNCATED]

Rd file 'calc_pwr_disj_2dftest.Rd':
  \examples lines wider than 100 characters:
     calc_pwr_disj_2dftest(K = 15, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.025 ... [TRUNCATED]

Rd file 'calc_pwr_pval_adj.Rd':
  \examples lines wider than 100 characters:
     calc_pwr_pval_adj(K = 15, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.025, rh ... [TRUNCATED]

Rd file 'calc_pwr_single_1dftest.Rd':
  \examples lines wider than 100 characters:
     calc_pwr_single_1dftest(K = 15, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, rho02 = 0.0 ... [TRUNCATED]

Rd file 'run_crt2_design.Rd':
  \examples lines wider than 100 characters:
     run_crt2_design(output = "power", K = 15, m = 300, alpha = 0.05, beta1 = 0.1, beta2 = 0.1, varY1 = 0.23, varY2 = 0.25, rho01 = 0.025, r ... [TRUNCATED]

These lines will be truncated in the PDF manual.
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... OK
  Running 'testthat.R'
* checking PDF version of manual ... [13s] OK
* checking HTML version of manual ... OK
* DONE
Status: 2 WARNINGs, 2 NOTEs