downloading reverse dependencies ‘adfExplorer’, ‘ambient’, ‘area’, ‘arrow’, ‘bases’, ‘bignum’, ‘bigrquery’, ‘binpackr’, ‘blosc’, ‘boostmath’, ‘capybara’, ‘carbondate’, ‘cheapr’, ‘clock’, ‘CMF’, ‘cpp11armadillo’, ‘cpp11bigwig’, ‘cpp11qpdf’, ‘cppdoubles’, ‘deformula’, ‘densityClust’, ‘economiccomplexity’, ‘EGM’, ‘epiworldR’, ‘fastplyr’, ‘frontmatter’, ‘ggforce’, ‘ggraph’, ‘gtfstools’, ‘haven’, ‘heumilkr’, ‘igraph’, ‘interprocess’, ‘isoband’, ‘jinjar’, ‘leontief’, ‘literanger’, ‘lobstr’, ‘lotri’, ‘lzstring’, ‘marquee’, ‘matrixCorr’, ‘mice’, ‘minired’, ‘minty’, ‘particles’, ‘pkgstats’, ‘poputils’, ‘ProTrackR2’, ‘rar’, ‘RcppAlgos’, ‘RcppBigIntAlgos’, ‘readNSx’, ‘readODS’, ‘readr’, ‘readtextgrid’, ‘readxl’, ‘redatam’, ‘redatamx’, ‘rjsoncons’, ‘RMariaDB’, ‘roxygen2’, ‘RPostgres’, ‘RSQLite’, ‘shide’, ‘shinytest2’, ‘SpatialKDE’, ‘spatialsample’, ‘stochtree’, ‘supercells’, ‘svglite’, ‘systemfonts’, ‘tardis’, ‘textshaping’, ‘tidyfast’, ‘tidygraph’, ‘tidyr’, ‘timechange’, ‘timeplyr’, ‘transformr’, ‘triptych’, ‘tweenr’, ‘twosamples’, ‘tzdb’, ‘unigd’, ‘valr’, ‘vdiffr’, ‘vroom’, ‘websocket’, ‘asciicast’, ‘cpp11eigen’, ‘OmopViewer’, ‘PhenotypeR’, ‘pkgbuild’, ‘pudu’, ‘Rcereal’, ‘renv’ trying URL 'file:///data/Repositories/CRAN/src/contrib/adfExplorer_2.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ambient_1.0.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/area_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/arrow_22.0.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bases_0.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bignum_0.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bigrquery_1.6.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/binpackr_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/blosc_0.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/boostmath_1.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/capybara_1.8.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/carbondate_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/cheapr_1.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/clock_0.7.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/CMF_1.0.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/cpp11armadillo_0.5.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/cpp11bigwig_0.1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/cpp11qpdf_1.3.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/cppdoubles_0.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/deformula_0.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/densityClust_0.3.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/economiccomplexity_2.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/EGM_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/epiworldR_0.11.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/fastplyr_0.9.91.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/frontmatter_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ggforce_0.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ggraph_2.2.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/gtfstools_1.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/haven_2.5.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/heumilkr_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/igraph_2.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/interprocess_1.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/isoband_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/jinjar_0.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/leontief_0.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/literanger_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/lobstr_1.1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/lotri_1.0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/lzstring_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/marquee_1.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/matrixCorr_0.8.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/mice_3.19.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/minired_1.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/minty_0.0.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/particles_0.2.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pkgstats_0.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/poputils_0.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ProTrackR2_0.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rar_0.0.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RcppAlgos_2.9.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RcppBigIntAlgos_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/readNSx_0.0.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/readODS_2.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/readr_2.1.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/readtextgrid_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/readxl_1.4.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/redatam_2.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/redatamx_1.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rjsoncons_1.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RMariaDB_1.3.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/roxygen2_7.3.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RPostgres_1.4.8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RSQLite_2.4.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shide_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shinytest2_0.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SpatialKDE_0.8.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/spatialsample_0.6.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/stochtree_0.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/supercells_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/svglite_2.2.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/systemfonts_1.3.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tardis_0.1.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/textshaping_1.0.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tidyfast_0.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tidygraph_1.3.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tidyr_1.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/timechange_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/timeplyr_1.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/transformr_0.1.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/triptych_0.1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tweenr_2.0.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/twosamples_2.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tzdb_0.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/unigd_0.1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/valr_0.9.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/vdiffr_1.0.8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/vroom_1.6.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/websocket_1.4.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/asciicast_2.3.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/cpp11eigen_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/OmopViewer_0.6.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/PhenotypeR_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pkgbuild_1.4.8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pudu_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/Rcereal_1.3.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/renv_1.1.6.tar.gz' installing dependencies ‘ami’, ‘AmigaFFH’, ‘bigrquerystorage’, ‘cheapr’, ‘CohortCharacteristics’, ‘CohortConstructor’, ‘CohortSurvival’, ‘cpp11’, ‘cpp11bigwig’, ‘cppdoubles’, ‘distro’, ‘DrugUtilisation’, ‘fastplyr’, ‘gtfsio’, ‘hedgehog’, ‘IncidencePrevalence’, ‘influenceR’, ‘kendallknight’, ‘literanger’, ‘MeasurementDiagnostics’, ‘modules’, ‘monotone’, ‘netplot’, ‘netrankr’, ‘NetSwan’, ‘OmopSketch’, ‘piggyback’, ‘ProTrackR’, ‘ProTrackR2’, ‘qs2’, ‘Rcereal’, ‘RcppBigIntAlgos’, ‘reactablefmtr’, ‘repurrrsive’, ‘rhino’, ‘rvec’, ‘shiny.fluent’, ‘shinyTree’, ‘shinyvalidate’, ‘tomledit’, ‘yaml12’ Warning: package ‘NetSwan’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘cpp4r’, ‘box.linters’, ‘box.lsp’, ‘shiny.react’ begin installing package ‘cpp4r’ begin installing package ‘box.linters’ begin installing package ‘box.lsp’ begin installing package ‘shiny.react’ begin installing package ‘AmigaFFH’ begin installing package ‘distro’ begin installing package ‘bigrquerystorage’ begin installing package ‘hedgehog’ begin installing package ‘cpp11’ begin installing package ‘tomledit’ begin installing package ‘yaml12’ begin installing package ‘gtfsio’ begin installing package ‘Rcereal’ begin installing package ‘ami’ begin installing package ‘rvec’ begin installing package ‘ProTrackR’ begin installing package ‘shinyvalidate’ begin installing package ‘repurrrsive’ begin installing package ‘monotone’ begin installing package ‘shinyTree’ begin installing package ‘reactablefmtr’ begin installing package ‘modules’ begin installing package ‘qs2’ * installing *source* package ‘distro’ ... ** this is package ‘distro’ version ‘0.1.1’ ** package ‘distro’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (distro) * installing *source* package ‘cpp11’ ... ** this is package ‘cpp11’ version ‘0.5.3’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cpp11) begin installing package ‘netplot’ begin installing package ‘piggyback’ begin installing package ‘influenceR’ begin installing package ‘netrankr’ begin installing package ‘CohortCharacteristics’ begin installing package ‘CohortConstructor’ begin installing package ‘CohortSurvival’ * installing *source* package ‘Rcereal’ ... ** this is package ‘Rcereal’ version ‘1.3.2’ ** package ‘Rcereal’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rcereal) begin installing package ‘DrugUtilisation’ * installing *source* package ‘box.lsp’ ... ** this is package ‘box.lsp’ version ‘0.1.3’ ** package ‘box.lsp’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (box.lsp) begin installing package ‘IncidencePrevalence’ * installing *source* package ‘cpp4r’ ... ** this is package ‘cpp4r’ version ‘0.4.0’ ** package ‘cpp4r’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cpp4r) begin installing package ‘ProTrackR2’ * installing *source* package ‘shiny.react’ ... ** this is package ‘shiny.react’ version ‘0.4.0’ ** package ‘shiny.react’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny.react) begin installing package ‘kendallknight’ * installing *source* package ‘modules’ ... ** this is package ‘modules’ version ‘0.13.0’ ** package ‘modules’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modules) begin installing package ‘cheapr’ * installing *source* package ‘ami’ ... ** this is package ‘ami’ version ‘0.2.1’ ** package ‘ami’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ami) begin installing package ‘literanger’ * installing *source* package ‘shinyvalidate’ ... ** this is package ‘shinyvalidate’ version ‘0.1.3’ ** package ‘shinyvalidate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyvalidate) begin installing package ‘RcppBigIntAlgos’ * installing *source* package ‘gtfsio’ ... ** this is package ‘gtfsio’ version ‘1.2.0’ ** package ‘gtfsio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gtfsio) begin installing package ‘cppdoubles’ * installing *source* package ‘monotone’ ... ** this is package ‘monotone’ version ‘0.1.2’ ** package ‘monotone’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4EpGjg/R.INSTALL3ebe13b942de4/monotone/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bimonotoneC.c -o bimonotoneC.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c legacyC.c -o legacyC.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c monotoneC.c -o monotoneC.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c unimonotoneC.c -o unimonotoneC.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o monotone.so bimonotoneC.o init.o legacyC.o monotoneC.o unimonotoneC.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4EpGjg/R.INSTALL3ebe13b942de4/monotone/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-monotone/00new/monotone/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (monotone) begin installing package ‘cpp11bigwig’ * installing *source* package ‘hedgehog’ ... ** this is package ‘hedgehog’ version ‘0.2’ ** package ‘hedgehog’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hedgehog) begin installing package ‘shiny.fluent’ * installing *source* package ‘repurrrsive’ ... ** this is package ‘repurrrsive’ version ‘1.1.0’ ** package ‘repurrrsive’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (repurrrsive) * installing *source* package ‘piggyback’ ... ** this is package ‘piggyback’ version ‘0.1.5’ ** package ‘piggyback’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (piggyback) * installing *source* package ‘box.linters’ ... ** this is package ‘box.linters’ version ‘0.10.7’ ** package ‘box.linters’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ! The packages {treesitter} and {treesitter.r} are required by namespaced_function_calls(). Please install these packages if you want to use namespaced_function_calls(). They require R version >= 4.3.0. ! The packages {treesitter} and {treesitter.r} are required by namespaced_function_calls(). Please install these packages if you want to use namespaced_function_calls(). They require R version >= 4.3.0. ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (box.linters) begin installing package ‘rhino’ * installing *source* package ‘shinyTree’ ... ** this is package ‘shinyTree’ version ‘0.3.1’ ** package ‘shinyTree’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyTree) * installing *source* package ‘influenceR’ ... ** this is package ‘influenceR’ version ‘0.1.5’ ** package ‘influenceR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRZe69P/R.INSTALL3f3186172560a/influenceR/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bridging.c -o bridging.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c keyplayer-utils.c -o keyplayer-utils.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c keyplayer.c -o keyplayer.o keyplayer.c: In function ‘keyplayer_driver’: keyplayer.c:33:8: warning: unused variable ‘allsets’ [-Wunused-variable] 33 | int *allsets; | ^~~~~~~ keyplayer.c:32:11: warning: unused variable ‘fits’ [-Wunused-variable] 32 | double *fits; | ^~~~ keyplayer.c:30:31: warning: unused variable ‘stop’ [-Wunused-variable] 30 | int np, rank, new_rank = 0, stop; | ^~~~ keyplayer.c:30:17: warning: unused variable ‘new_rank’ [-Wunused-variable] 30 | int np, rank, new_rank = 0, stop; | ^~~~~~~~ keyplayer.c:30:11: warning: unused variable ‘rank’ [-Wunused-variable] 30 | int np, rank, new_rank = 0, stop; | ^~~~ keyplayer.c:30:7: warning: unused variable ‘np’ [-Wunused-variable] 30 | int np, rank, new_rank = 0, stop; | ^~ gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c packagename_init.c -o packagename_init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c prefix_sums.c -o prefix_sums.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c process_sparse.c -o process_sparse.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c snap_wrapper.c -o snap_wrapper.o snap_wrapper.c: In function ‘snap_keyplayer_R’: snap_wrapper.c:194:7: warning: unused variable ‘r’ [-Wunused-variable] 194 | int r = read_graph_from_edgelist(&G, E, n, m); | ^ snap_wrapper.c: In function ‘snap_bridging_R’: snap_wrapper.c:223:7: warning: unused variable ‘r’ [-Wunused-variable] 223 | int r = read_graph_from_edgelist(&G, E, n, m); | ^ snap_wrapper.c:219:5: warning: unused variable ‘mpi’ [-Wunused-variable] 219 | mpi = INTEGER(sMPI)[0]; // use mpi? | ^~~ gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vertex_betweenness_centrality.c -o vertex_betweenness_centrality.o vertex_betweenness_centrality.c: In function ‘vertex_betweenness_centrality_parBFS’: vertex_betweenness_centrality.c:81:14: warning: variable ‘stream’ set but not used [-Wunused-but-set-variable] 81 | int* stream; | ^~~~~~ vertex_betweenness_centrality.c:66:9: warning: unused variable ‘seed’ [-Wunused-variable] 66 | int seed = 2387; | ^~~~ vertex_betweenness_centrality.c: In function ‘vertex_betweenness_centrality_simple’: vertex_betweenness_centrality.c:549:13: warning: unused variable ‘myLock’ [-Wunused-variable] 549 | int myLock; | ^~~~~~ vertex_betweenness_centrality.c:543:14: warning: variable ‘stream’ set but not used [-Wunused-but-set-variable] 543 | int* stream; | ^~~~~~ vertex_betweenness_centrality.c:519:9: warning: unused variable ‘seed’ [-Wunused-variable] 519 | int seed = 2387; | ^~~~ vertex_betweenness_centrality.c:514:10: warning: unused variable ‘chunkSize’ [-Wunused-variable] 514 | long chunkSize; | ^~~~~~~~~ gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o influenceR.so bridging.o keyplayer-utils.o keyplayer.o packagename_init.o prefix_sums.o process_sparse.o snap_wrapper.o vertex_betweenness_centrality.o -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRZe69P/R.INSTALL3f3186172560a/influenceR/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-influenceR/00new/influenceR/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (influenceR) * installing *source* package ‘cppdoubles’ ... ** this is package ‘cppdoubles’ version ‘0.4.0’ ** package ‘cppdoubles’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxqNutk/R.INSTALL3f6f020f1f229/cppdoubles/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c doubles.cpp -o doubles.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o cppdoubles.so cpp11.o doubles.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxqNutk/R.INSTALL3f6f020f1f229/cppdoubles/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-cppdoubles/00new/cppdoubles/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cppdoubles) * installing *source* package ‘shiny.fluent’ ... ** this is package ‘shiny.fluent’ version ‘0.4.0’ ** package ‘shiny.fluent’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shiny.fluent) * installing *source* package ‘reactablefmtr’ ... ** this is package ‘reactablefmtr’ version ‘2.0.0’ ** package ‘reactablefmtr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reactablefmtr) * installing *source* package ‘rhino’ ... ** this is package ‘rhino’ version ‘1.11.0’ ** package ‘rhino’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rhino) * installing *source* package ‘CohortCharacteristics’ ... ** this is package ‘CohortCharacteristics’ version ‘1.1.0’ ** package ‘CohortCharacteristics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortCharacteristics) * installing *source* package ‘netplot’ ... ** this is package ‘netplot’ version ‘0.3-0’ ** package ‘netplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (netplot) * installing *source* package ‘IncidencePrevalence’ ... ** this is package ‘IncidencePrevalence’ version ‘1.2.1’ ** package ‘IncidencePrevalence’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IncidencePrevalence) * installing *source* package ‘CohortSurvival’ ... ** this is package ‘CohortSurvival’ version ‘1.1.0’ ** package ‘CohortSurvival’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortSurvival) * installing *source* package ‘kendallknight’ ... ** this is package ‘kendallknight’ version ‘1.0.1’ ** package ‘kendallknight’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcO2loQ/R.INSTALL3f4d37881ce13/kendallknight/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp4r/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp4r.cpp -o cpp4r.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp4r/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c kendall_correlation.cpp -o kendall_correlation.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o kendallknight.so cpp4r.o kendall_correlation.o -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcO2loQ/R.INSTALL3f4d37881ce13/kendallknight/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-kendallknight/00new/kendallknight/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (kendallknight) * installing *source* package ‘DrugUtilisation’ ... ** this is package ‘DrugUtilisation’ version ‘1.0.5’ ** package ‘DrugUtilisation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DrugUtilisation) * installing *source* package ‘rvec’ ... ** this is package ‘rvec’ version ‘1.0.0’ ** package ‘rvec’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rvec) * installing *source* package ‘AmigaFFH’ ... ** this is package ‘AmigaFFH’ version ‘0.4.8’ ** package ‘AmigaFFH’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AmigaFFH) * installing *source* package ‘CohortConstructor’ ... ** this is package ‘CohortConstructor’ version ‘0.6.1’ ** package ‘CohortConstructor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortConstructor) begin installing package ‘MeasurementDiagnostics’ begin installing package ‘OmopSketch’ * installing *source* package ‘ProTrackR’ ... ** this is package ‘ProTrackR’ version ‘0.4.4’ ** package ‘ProTrackR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ProTrackR) * installing *source* package ‘MeasurementDiagnostics’ ... ** this is package ‘MeasurementDiagnostics’ version ‘0.2.0’ ** package ‘MeasurementDiagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MeasurementDiagnostics) * installing *source* package ‘OmopSketch’ ... ** this is package ‘OmopSketch’ version ‘1.0.0’ ** package ‘OmopSketch’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OmopSketch) * installing *source* package ‘cpp11bigwig’ ... ** this is package ‘cpp11bigwig’ version ‘0.1.3’ ** package ‘cpp11bigwig’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpejIOph/R.INSTALL3f7096bad8684/cpp11bigwig/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11bigwig.cpp -o cpp11bigwig.o (cd libBigWig; make) make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpejIOph/R.INSTALL3f7096bad8684/cpp11bigwig/src/libBigWig' gcc -c -Wall -O3 -DNOCURL -fpic bwRead.c -o bwRead.o gcc -c -Wall -O3 -DNOCURL -fpic bwStats.c -o bwStats.o gcc -c -Wall -O3 -DNOCURL -fpic bwValues.c -o bwValues.o gcc -c -Wall -O3 -DNOCURL -fpic bwWrite.c -o bwWrite.o gcc -c -Wall -O3 -DNOCURL -fpic io.c -o io.o ar rcs libBigWig.a bwRead.o bwStats.o bwValues.o bwWrite.o io.o make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpejIOph/R.INSTALL3f7096bad8684/cpp11bigwig/src/libBigWig' g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o cpp11bigwig.so cpp11.o cpp11bigwig.o -L./libBigWig -lBigWig -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpejIOph/R.INSTALL3f7096bad8684/cpp11bigwig/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-cpp11bigwig/00new/cpp11bigwig/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cpp11bigwig) * installing *source* package ‘ProTrackR2’ ... ** this is package ‘ProTrackR2’ version ‘0.1.1’ ** package ‘ProTrackR2’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplMHvwV/R.INSTALL3f47314878596/ProTrackR2/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/modloaders/pt2_load_mod15.c -o pt2-clone/modloaders/pt2_load_mod15.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/modloaders/pt2_load_mod31.c -o pt2-clone/modloaders/pt2_load_mod31.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/modloaders/pt2_pp_unpack.c -o pt2-clone/modloaders/pt2_pp_unpack.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/modloaders/pt2_xpk_unpack.c -o pt2-clone/modloaders/pt2_xpk_unpack.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_audio.c -o pt2-clone/pt2_audio.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_blep.c -o pt2-clone/pt2_blep.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_config.c -o pt2-clone/pt2_config.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_downsample2x.c -o pt2-clone/pt2_downsample2x.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_helpers.c -o pt2-clone/pt2_helpers.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_hpc.c -o pt2-clone/pt2_hpc.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_math.c -o pt2-clone/pt2_math.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_module_loader.c -o pt2-clone/pt2_module_loader.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_module_saver.c -o pt2-clone/pt2_module_saver.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_pattern_viewer.c -o pt2-clone/pt2_pattern_viewer.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_paula.c -o pt2-clone/pt2_paula.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_rcfilters.c -o pt2-clone/pt2_rcfilters.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_replayer_light.c -o pt2-clone/pt2_replayer_light.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_sample_loader.c -o pt2-clone/pt2_sample_loader.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_sampler.c -o pt2-clone/pt2_sampler.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_structs.c -o pt2-clone/pt2_structs.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_tables.c -o pt2-clone/pt2_tables.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/pt2_unicode.c -o pt2-clone/pt2_unicode.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/smploaders/pt2_load_aiff.c -o pt2-clone/smploaders/pt2_load_aiff.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/smploaders/pt2_load_iff.c -o pt2-clone/smploaders/pt2_load_iff.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/smploaders/pt2_load_raw.c -o pt2-clone/smploaders/pt2_load_raw.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pt2-clone/smploaders/pt2_load_wav.c -o pt2-clone/smploaders/pt2_load_wav.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c get_mod.cpp -o get_mod.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c mod_header.cpp -o mod_header.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c mod_io.cpp -o mod_io.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c mod_render.cpp -o mod_render.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c patterns.cpp -o patterns.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c pt_cell.cpp -o pt_cell.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c pt_cleanup.cpp -o pt_cleanup.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c pt_init.cpp -o pt_init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c samp_io.cpp -o samp_io.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Ipt2-clone -fpic -g -O2 -Wall -pedantic -mtune=native -c samples.cpp -o samples.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o ProTrackR2.so pt2-clone/modloaders/pt2_load_mod15.o pt2-clone/modloaders/pt2_load_mod31.o pt2-clone/modloaders/pt2_pp_unpack.o pt2-clone/modloaders/pt2_xpk_unpack.o pt2-clone/pt2_audio.o pt2-clone/pt2_blep.o pt2-clone/pt2_config.o pt2-clone/pt2_downsample2x.o pt2-clone/pt2_helpers.o pt2-clone/pt2_hpc.o pt2-clone/pt2_math.o pt2-clone/pt2_module_loader.o pt2-clone/pt2_module_saver.o pt2-clone/pt2_pattern_viewer.o pt2-clone/pt2_paula.o pt2-clone/pt2_rcfilters.o pt2-clone/pt2_replayer_light.o pt2-clone/pt2_sample_loader.o pt2-clone/pt2_sampler.o pt2-clone/pt2_structs.o pt2-clone/pt2_tables.o pt2-clone/pt2_unicode.o pt2-clone/smploaders/pt2_load_aiff.o pt2-clone/smploaders/pt2_load_iff.o pt2-clone/smploaders/pt2_load_raw.o pt2-clone/smploaders/pt2_load_wav.o cpp11.o get_mod.o mod_header.o mod_io.o mod_render.o patterns.o pt_cell.o pt_cleanup.o pt_init.o samp_io.o samples.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplMHvwV/R.INSTALL3f47314878596/ProTrackR2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ProTrackR2/00new/ProTrackR2/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ProTrackR2) * installing *source* package ‘RcppBigIntAlgos’ ... ** this is package ‘RcppBigIntAlgos’ version ‘1.1.0’ ** package ‘RcppBigIntAlgos’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp6cNjIC/R.INSTALL3f64c5684cd85/RcppBigIntAlgos/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ConvertUtils.cpp -o ConvertUtils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Divisors.cpp -o Divisors.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DivisorsUtils.cpp -o DivisorsUtils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c GmpConvert.cpp -o GmpConvert.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c LenstraECM.cpp -o LenstraECM.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c MultiPoly.cpp -o MultiPoly.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c NumThreads.cpp -o NumThreads.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PollardRho.cpp -o PollardRho.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Polynomial.cpp -o Polynomial.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PrimeFactorUtils.cpp -o PrimeFactorUtils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PrimeFactorization.cpp -o PrimeFactorization.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c QuadraticSieve.cpp -o QuadraticSieve.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ReduceMatrix.cpp -o ReduceMatrix.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SieveUtils.cpp -o SieveUtils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SolutionSearch.cpp -o SolutionSearch.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c StdConvert.cpp -o StdConvert.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TonelliShanks.cpp -o TonelliShanks.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o RcppBigIntAlgos.so ConvertUtils.o Divisors.o DivisorsUtils.o GmpConvert.o LenstraECM.o MultiPoly.o NumThreads.o PollardRho.o Polynomial.o PrimeFactorUtils.o PrimeFactorization.o QuadraticSieve.o ReduceMatrix.o SieveUtils.o SolutionSearch.o StdConvert.o TonelliShanks.o cpp11.o -lgmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp6cNjIC/R.INSTALL3f64c5684cd85/RcppBigIntAlgos/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-RcppBigIntAlgos/00new/RcppBigIntAlgos/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppBigIntAlgos) * installing *source* package ‘qs2’ ... ** this is package ‘qs2’ version ‘0.1.7’ ** package ‘qs2’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++-15 -std=gnu++17 accepts -g... yes checking for g++-15 -std=gnu++17 option to enable C++11 features... none needed C++ compiler: g++-15 -std=gnu++17 zstd 1.5.7 library detected -- skipping zstd compilation Fixed blocksize Checking if atomic link works without -latomic TBB use determined by RcppParallel configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpalOm9u/R.INSTALL3ebe33aa2d44d/qs2/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -DRCPP_NO_RTTI -DRCPP_NO_SUGAR -I../inst/include -I. -DIS_UTF8_LOCALE=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stringfish/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -DRCPP_NO_RTTI -DRCPP_NO_SUGAR -I../inst/include -I. -DIS_UTF8_LOCALE=1 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/stringfish/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c qx_functions.cpp -o qx_functions.o In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include/tbb/internal/_concurrent_unordered_impl.h:37, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include/tbb/concurrent_unordered_set.h:23, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include/RcppParallel/TBB.h:11, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include/RcppParallel.h:24, from qx_functions.cpp:1: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include/tbb/internal/../atomic.h: In instantiation of ‘tbb::atomic& tbb::internal::as_atomic(T&) [with T = long unsigned int]’: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include/tbb/tbb_thread.h:251:29: required from here 251 | return as_atomic(location.my_id).compare_and_swap(value.my_id, comparand.my_id); | ~~~~~~~~~^~~~~~~~~~~~~~~~ /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include/tbb/internal/../atomic.h:544:12: warning: casting ‘long unsigned int’ to ‘tbb::atomic&’ does not use ‘constexpr tbb::atomic::atomic(long unsigned int)’ [-Wcast-user-defined] 544 | return (atomic&)t; | ^~~~~~~~~~~~~ g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o qs2.so RcppExports.o qx_functions.o -L. -lzstd -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpalOm9u/R.INSTALL3ebe33aa2d44d/qs2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-qs2/00new/qs2/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qs2) * installing *source* package ‘cheapr’ ... ** this is package ‘cheapr’ version ‘1.5.0’ ** package ‘cheapr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs specified C++17 using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHdYZy0/R.INSTALL3f4e21eb75913/cheapr/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c altrep.cpp -o altrep.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c api.cpp -o api.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c attrs.cpp -o attrs.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c cast.cpp -o cast.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c combine.cpp -o combine.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c conditions.cpp -o conditions.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c gcd.cpp -o gcd.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c groups.cpp -o groups.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c int64.cpp -o int64.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lag.cpp -o lag.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lists.cpp -o lists.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c math.cpp -o math.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nas.cpp -o nas.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c replace.cpp -o replace.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c scalars.cpp -o scalars.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sequences.cpp -o sequences.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sset.cpp -o sset.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c strings.cpp -o strings.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c which.cpp -o which.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o cheapr.so altrep.o api.o attrs.o cast.o combine.o conditions.o cpp11.o gcd.o groups.o int64.o lag.o lists.o math.o nas.o replace.o scalars.o sequences.o sset.o strings.o utils.o which.o -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHdYZy0/R.INSTALL3f4e21eb75913/cheapr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-cheapr/00new/cheapr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cheapr) begin installing package ‘fastplyr’ * installing *source* package ‘tomledit’ ... ** this is package ‘tomledit’ version ‘0.1.1’ ** package ‘tomledit’ successfully unpacked and MD5 sums checked ** using staged installation Using cargo 1.91.1 (ea2d97820 2025-10-10) (built from a source tarball) Using rustc 1.91.1 (ed61e7d7e 2025-11-07) (built from a source tarball) Building for CRAN. Writing `src/Makevars`. `tools/config.R` has finished. ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnAeuvv/R.INSTALL3ebc8484baea6/tomledit/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c entrypoint.c -o entrypoint.o # Check if NOT_CRAN is false and unzip vendor.tar.xz if so if [ "" != "true" ]; then \ if [ -f ./rust/vendor.tar.xz ]; then \ tar xf rust/vendor.tar.xz && \ mkdir -p /home/hornik/tmp/scratch/RtmpnAeuvv/R.INSTALL3ebc8484baea6/tomledit/src/.cargo && \ cp rust/vendor-config.toml /home/hornik/tmp/scratch/RtmpnAeuvv/R.INSTALL3ebc8484baea6/tomledit/src/.cargo/config.toml; \ fi; \ fi export CARGO_HOME=/home/hornik/tmp/scratch/RtmpnAeuvv/R.INSTALL3ebc8484baea6/tomledit/src/.cargo && \ export PATH="/usr/local/bin:/usr/bin:/bin:/home/hornik/.cargo/bin" && \ RUSTFLAGS=" --print=native-static-libs" cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target Compiling proc-macro2 v1.0.94 Compiling build-print v0.1.1 Compiling unicode-ident v1.0.18 Compiling extendr-ffi v0.8.0 Compiling paste v1.0.15 Compiling extendr-api v0.8.0 Compiling quote v1.0.40 Compiling hashbrown v0.15.2 Compiling syn v2.0.100 Compiling equivalent v1.0.2 Compiling indexmap v2.9.0 Compiling once_cell v1.21.3 Compiling toml_datetime v0.6.8 Compiling winnow v0.7.6 Compiling toml_edit v0.22.24 Compiling extendr-macros v0.8.0 Compiling tomledit v0.1.0 (/home/hornik/tmp/scratch/RtmpnAeuvv/R.INSTALL3ebc8484baea6/tomledit/src/rust) note: link against the following native artifacts when linking against this static library. The order and any duplication can be significant on some platforms. note: native-static-libs: -lR -lgcc_s -lutil -lrt -lpthread -lm -ldl -lc Finished `release` profile [optimized] target(s) in 34.50s # Always clean up CARGOTMP rm -Rf /home/hornik/tmp/scratch/RtmpnAeuvv/R.INSTALL3ebc8484baea6/tomledit/src/.cargo; gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o tomledit.so entrypoint.o -L./rust/target/release -ltomledit -L/home/hornik/tmp/R/lib -lR rm -Rf /home/hornik/tmp/scratch/RtmpnAeuvv/R.INSTALL3ebc8484baea6/tomledit/src/.cargo /home/hornik/tmp/scratch/RtmpnAeuvv/R.INSTALL3ebc8484baea6/tomledit/src/vendor ./rust/target make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnAeuvv/R.INSTALL3ebc8484baea6/tomledit/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-tomledit/00new/tomledit/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tomledit) * installing *source* package ‘yaml12’ ... ** this is package ‘yaml12’ version ‘0.1.0’ ** package ‘yaml12’ successfully unpacked and MD5 sums checked ** using staged installation Using cargo 1.91.1 (ea2d97820 2025-10-10) (built from a source tarball) Using rustc 1.91.1 (ed61e7d7e 2025-11-07) (built from a source tarball) Building for CRAN. Writing `src/Makevars`. `tools/config.R` has finished. ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c entrypoint.c -o entrypoint.o if [ -d ./vendor ]; then \ echo "=== Using offline vendor directory ==="; \ mkdir -p /home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src/.cargo && \ cp rust/vendor-config.toml /home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src/.cargo/config.toml; \ elif [ -f ./rust/vendor.tar.xz ]; then \ echo "=== Using offline vendor tarball ==="; \ tar xf rust/vendor.tar.xz && \ mkdir -p /home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src/.cargo && \ cp rust/vendor-config.toml /home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src/.cargo/config.toml; \ fi === Using offline vendor tarball === export CARGO_HOME=/home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src/.cargo && \ export PATH="/usr/local/bin:/usr/bin:/bin:/home/hornik/.cargo/bin" && \ RUSTFLAGS=" --print=native-static-libs" cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target Compiling proc-macro2 v1.0.103 Compiling unicode-ident v1.0.22 Compiling quote v1.0.42 Compiling autocfg v1.5.0 Compiling num-traits v0.2.19 Compiling thiserror v2.0.17 Compiling extendr-ffi v0.8.1 (https://github.com/extendr/extendr?rev=a3e35fb42a008d0c209e61d994143d00a86e350f#a3e35fb4) Compiling syn v2.0.111 Compiling paste v1.0.15 Compiling foldhash v0.1.5 Compiling hashbrown v0.15.5 Compiling arraydeque v0.5.1 Compiling extendr-api v0.8.1 (https://github.com/extendr/extendr?rev=a3e35fb42a008d0c209e61d994143d00a86e350f#a3e35fb4) Compiling lazy_static v1.5.0 Compiling cfg-if v1.0.4 Compiling encoding_rs v0.8.35 Compiling thiserror-impl v2.0.17 Compiling extendr-macros v0.8.1 (https://github.com/extendr/extendr?rev=a3e35fb42a008d0c209e61d994143d00a86e350f#a3e35fb4) Compiling saphyr-parser v0.0.6 (https://github.com/t-kalinowski/saphyr?branch=r-patched#73f6994f) Compiling ordered-float v5.1.0 Compiling hashlink v0.10.0 Compiling once_cell v1.21.3 Compiling saphyr v0.0.6 (https://github.com/t-kalinowski/saphyr?branch=r-patched#73f6994f) Compiling yaml12 v0.1.0 (/home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src/rust) note: link against the following native artifacts when linking against this static library. The order and any duplication can be significant on some platforms. note: native-static-libs: -lR -lgcc_s -lutil -lrt -lpthread -lm -ldl -lc Finished `release` profile [optimized] target(s) in 43.09s # Always clean up CARGOTMP rm -Rf /home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src/.cargo; gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o yaml12.so entrypoint.o -L./rust/target/release -lyaml12 -L/home/hornik/tmp/R/lib -lR rm -Rf /home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src/.cargo /home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src/vendor ./rust/target make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpOCH4jD/R.INSTALL3ebb51659d9d8/yaml12/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-yaml12/00new/yaml12/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (yaml12) * installing *source* package ‘fastplyr’ ... ** this is package ‘fastplyr’ version ‘0.9.91’ ** package ‘fastplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs specified C++17 using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpz4DsBu/R.INSTALL3ffbd230c504c/fastplyr/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c expressions.cpp -o expressions.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fastplyr.cpp -o fastplyr.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c groups.cpp -o groups.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c imports.cpp -o imports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mask.cpp -o mask.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cheapr/include' -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tidy.cpp -o tidy.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fastplyr.so cpp11.o expressions.o fastplyr.o groups.o imports.o mask.o tidy.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpz4DsBu/R.INSTALL3ffbd230c504c/fastplyr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fastplyr/00new/fastplyr/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastplyr) * installing *source* package ‘bigrquerystorage’ ... ** this is package ‘bigrquerystorage’ version ‘1.2.2’ ** package ‘bigrquerystorage’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-DNOMINMAX Using PKG_LIBS=-lprotobuf -lgrpc++ -lgrpc -laddress_sorting -lre2 -lupb -lcares -lz -lgpr -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -lssl -lcrypto -labsl_raw_logging_internal -labsl_throw_delegate -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_hash_set -labsl_hashtablez_sampler -labsl_hash -labsl_city -labsl_low_level_hash -labsl_throw_delegate -labsl_random_distributions -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_random_seed_sequences -labsl_throw_delegate -labsl_random_internal_pool_urbg -labsl_random_internal_randen -labsl_random_internal_randen_hwaes -labsl_random_internal_randen_hwaes_impl -labsl_random_internal_randen_slow -labsl_random_internal_platform -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_random_internal_seed_material -labsl_raw_logging_internal -labsl_random_seed_gen_exception -labsl_statusor -labsl_status -labsl_cord -labsl_cordz_info -labsl_cord_internal -labsl_cordz_functions -labsl_exponential_biased -labsl_cordz_handle -labsl_crc_cord_state -labsl_crc32c -labsl_crc_internal -labsl_crc_cpu_detect -labsl_bad_optional_access -labsl_strerror -labsl_str_format_internal -labsl_synchronization -labsl_graphcycles_internal -labsl_kernel_timeout_internal -labsl_stacktrace -labsl_symbolize -labsl_debugging_internal -labsl_demangle_internal -labsl_demangle_rust -labsl_decode_rust_punycode -labsl_utf8_for_code_point -labsl_malloc_internal -labsl_time -labsl_civil_time -labsl_strings -labsl_strings_internal -labsl_string_view -labsl_base -Wl,--push-state,--as-needed -latomic -Wl,--pop-state -lrt -labsl_spinlock_wait -labsl_int128 -labsl_throw_delegate -labsl_time_zone -labsl_bad_variant_access -labsl_raw_logging_internal -labsl_log_severity Found C++17 compiler: g++-15 -std=gnu++17 -g -O2 -Wall -pedantic -mtune=native Using libprotoc 3.21.12 from /usr/bin/protoc Using /usr/bin/grpc_cpp_plugin ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeDbp0w/R.INSTALL3eba67a70b280/bigrquerystorage/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/api/field_behavior.pb.cc -o google/api/field_behavior.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/api/http.pb.cc -o google/api/http.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/api/launch_stage.pb.cc -o google/api/launch_stage.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/api/resource.pb.cc -o google/api/resource.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/cloud/bigquery/storage/v1/arrow.pb.cc -o google/cloud/bigquery/storage/v1/arrow.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/cloud/bigquery/storage/v1/avro.pb.cc -o google/cloud/bigquery/storage/v1/avro.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/cloud/bigquery/storage/v1/table.pb.cc -o google/cloud/bigquery/storage/v1/table.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/api/annotations.pb.cc -o google/api/annotations.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/api/client.pb.cc -o google/api/client.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/cloud/bigquery/storage/v1/protobuf.pb.cc -o google/cloud/bigquery/storage/v1/protobuf.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/cloud/bigquery/storage/v1/stream.pb.cc -o google/cloud/bigquery/storage/v1/stream.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/rpc/status.pb.cc -o google/rpc/status.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/cloud/bigquery/storage/v1/storage.pb.cc -o google/cloud/bigquery/storage/v1/storage.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c google/cloud/bigquery/storage/v1/storage.grpc.pb.cc -o google/cloud/bigquery/storage/v1/storage.grpc.pb.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c bqs.cpp -o bqs.o bqs.cpp:29:33: warning: unknown option after ‘#pragma GCC diagnostic’ kind [-Wpragmas] 29 | # pragma GCC diagnostic ignored "-Winconsistent-missing-override" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -DNOMINMAX -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o bigrquerystorage.so google/api/field_behavior.pb.o google/api/http.pb.o google/api/launch_stage.pb.o google/api/resource.pb.o google/cloud/bigquery/storage/v1/arrow.pb.o google/cloud/bigquery/storage/v1/avro.pb.o google/cloud/bigquery/storage/v1/table.pb.o google/api/annotations.pb.o google/api/client.pb.o google/cloud/bigquery/storage/v1/protobuf.pb.o google/cloud/bigquery/storage/v1/stream.pb.o google/rpc/status.pb.o google/cloud/bigquery/storage/v1/storage.pb.o google/cloud/bigquery/storage/v1/storage.grpc.pb.o bqs.o RcppExports.o -lprotobuf -lgrpc++ -lgrpc -laddress_sorting -lre2 -lupb -lcares -lz -lgpr -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -lssl -lcrypto -labsl_raw_logging_internal -labsl_throw_delegate -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_hash_set -labsl_hashtablez_sampler -labsl_hash -labsl_city -labsl_low_level_hash -labsl_throw_delegate -labsl_random_distributions -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_random_seed_sequences -labsl_throw_delegate -labsl_random_internal_pool_urbg -labsl_random_internal_randen -labsl_random_internal_randen_hwaes -labsl_random_internal_randen_hwaes_impl -labsl_random_internal_randen_slow -labsl_random_internal_platform -labsl_raw_logging_internal -labsl_raw_logging_internal -labsl_throw_delegate -labsl_raw_logging_internal -labsl_random_internal_seed_material -labsl_raw_logging_internal -labsl_random_seed_gen_exception -labsl_statusor -labsl_status -labsl_cord -labsl_cordz_info -labsl_cord_internal -labsl_cordz_functions -labsl_exponential_biased -labsl_cordz_handle -labsl_crc_cord_state -labsl_crc32c -labsl_crc_internal -labsl_crc_cpu_detect -labsl_bad_optional_access -labsl_strerror -labsl_str_format_internal -labsl_synchronization -labsl_graphcycles_internal -labsl_kernel_timeout_internal -labsl_stacktrace -labsl_symbolize -labsl_debugging_internal -labsl_demangle_internal -labsl_demangle_rust -labsl_decode_rust_punycode -labsl_utf8_for_code_point -labsl_malloc_internal -labsl_time -labsl_civil_time -labsl_strings -labsl_strings_internal -labsl_string_view -labsl_base -Wl,--push-state,--as-needed -latomic -Wl,--pop-state -lrt -labsl_spinlock_wait -labsl_int128 -labsl_throw_delegate -labsl_time_zone -labsl_bad_variant_access -labsl_raw_logging_internal -labsl_log_severity -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeDbp0w/R.INSTALL3eba67a70b280/bigrquerystorage/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-bigrquerystorage/00new/bigrquerystorage/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bigrquerystorage) * installing *source* package ‘literanger’ ... ** this is package ‘literanger’ version ‘0.2.0’ ** package ‘literanger’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpwQMujj/R.INSTALL3f5d0359298c7/literanger/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_recheck/Library/Rcereal/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../src -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_recheck/Library/Rcereal/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../src -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11_io.cpp -o cpp11_io.o In file included from ../src/literanger/Forest.defn.h:35, from ../src/literanger/ForestClassification.defn.h:39, from literanger/ForestClassification.h:18, from cpp11_io.cpp:46: ../src/literanger/TreeBase.defn.h: In member function ‘bool literanger::TreeBase::split_node(size_t, size_t, size_t, const literanger::TrainingParameters&, std::shared_ptr, literanger::key_vector&)’: ../src/literanger/TreeBase.defn.h:448:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 447 | const ull_bitenc partition_key = *( | ~ 448 | (unsigned long long *)(&split_value) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 | ); | ~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_recheck/Library/Rcereal/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../src -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11_merge.cpp -o cpp11_merge.o In file included from ../src/literanger/Forest.defn.h:35, from ../src/literanger/ForestClassification.defn.h:39, from literanger/ForestClassification.h:18, from cpp11_merge.cpp:50: ../src/literanger/TreeBase.defn.h: In member function ‘bool literanger::TreeBase::split_node(size_t, size_t, size_t, const literanger::TrainingParameters&, std::shared_ptr, literanger::key_vector&)’: ../src/literanger/TreeBase.defn.h:448:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 447 | const ull_bitenc partition_key = *( | ~ 448 | (unsigned long long *)(&split_value) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 | ); | ~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_recheck/Library/Rcereal/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../src -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11_predict.cpp -o cpp11_predict.o In file included from ../src/literanger/Forest.defn.h:35, from ../src/literanger/ForestClassification.defn.h:39, from literanger/ForestClassification.h:18, from cpp11_predict.cpp:47: ../src/literanger/TreeBase.defn.h: In member function ‘bool literanger::TreeBase::split_node(size_t, size_t, size_t, const literanger::TrainingParameters&, std::shared_ptr, literanger::key_vector&)’: ../src/literanger/TreeBase.defn.h:448:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 447 | const ull_bitenc partition_key = *( | ~ 448 | (unsigned long long *)(&split_value) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 | ); | ~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_recheck/Library/Rcereal/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../src -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11_train.cpp -o cpp11_train.o In file included from ../src/literanger/Forest.defn.h:35, from ../src/literanger/ForestClassification.defn.h:39, from literanger/ForestClassification.h:18, from cpp11_train.cpp:45: ../src/literanger/TreeBase.defn.h: In member function ‘bool literanger::TreeBase::split_node(size_t, size_t, size_t, const literanger::TrainingParameters&, std::shared_ptr, literanger::key_vector&)’: ../src/literanger/TreeBase.defn.h:448:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 447 | const ull_bitenc partition_key = *( | ~ 448 | (unsigned long long *)(&split_value) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 | ); | ~ g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o literanger.so cpp11.o cpp11_io.o cpp11_merge.o cpp11_predict.o cpp11_train.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpwQMujj/R.INSTALL3f5d0359298c7/literanger/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-literanger/00new/literanger/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (literanger) * installing *source* package ‘netrankr’ ... ** this is package ‘netrankr’ version ‘1.2.4’ ** package ‘netrankr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplEmmqV/R.INSTALL3f3191a99470b/netrankr/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c approx_expected.cpp -o approx_expected.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c approxrelative.cpp -o approxrelative.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c checkPairs.cpp -o checkPairs.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c dependCurFlow.cpp -o dependCurFlow.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c dependRspn.cpp -o dependRspn.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c dependency.cpp -o dependency.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c latticeOfIdeals.cpp -o latticeOfIdeals.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c listingIdeals.cpp -o listingIdeals.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c mcmc_rank.cpp -o mcmc_rank.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nialgo.cpp -o nialgo.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c pdalgo.cpp -o pdalgo.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c preserve.cpp -o preserve.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c rankProbs.cpp -o rankProbs.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c rankings.cpp -o rankings.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c resistanceDistance.cpp -o resistanceDistance.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c transreduct.cpp -o transreduct.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c treeOfIdeals.cpp -o treeOfIdeals.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o netrankr.so RcppExports.o approx_expected.o approxrelative.o checkPairs.o dependCurFlow.o dependRspn.o dependency.o latticeOfIdeals.o listingIdeals.o mcmc_rank.o nialgo.o pdalgo.o preserve.o rankProbs.o rankings.o resistanceDistance.o transreduct.o treeOfIdeals.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplEmmqV/R.INSTALL3f3191a99470b/netrankr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-netrankr/00new/netrankr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (netrankr) checking cpp11_0.5.3.tar.gz ... checking adfExplorer_2.1.0.tar.gz ... checking ambient_1.0.3.tar.gz ... checking area_0.2.0.tar.gz ... checking arrow_22.0.0.1.tar.gz ... checking bases_0.1.2.tar.gz ... checking bignum_0.3.2.tar.gz ... checking bigrquery_1.6.1.tar.gz ... checking binpackr_0.2.0.tar.gz ... checking blosc_0.1.2.tar.gz ... checking boostmath_1.4.0.tar.gz ... checking capybara_1.8.0.tar.gz ... checking carbondate_1.1.0.tar.gz ... checking cheapr_1.5.0.tar.gz ... checking clock_0.7.4.tar.gz ... checking CMF_1.0.3.tar.gz ... checking cpp11armadillo_0.5.4.tar.gz ... checking cpp11bigwig_0.1.3.tar.gz ... checking cpp11qpdf_1.3.5.tar.gz ... checking cppdoubles_0.4.0.tar.gz ... checking deformula_0.1.2.tar.gz ... checking densityClust_0.3.3.tar.gz ... checking economiccomplexity_2.0.0.tar.gz ... checking EGM_0.2.0.tar.gz ... checking epiworldR_0.11.0.1.tar.gz ... checking fastplyr_0.9.91.tar.gz ... checking frontmatter_0.1.0.tar.gz ... checking ggforce_0.5.0.tar.gz ... checking heumilkr_0.3.0.tar.gz ... checking leontief_0.4.tar.gz ... checking mice_3.19.0.tar.gz ... checking pkgstats_0.2.1.tar.gz ... checking readODS_2.3.2.tar.gz ... checking poputils_0.5.0.tar.gz ... checking literanger_0.2.0.tar.gz ... checking minired_1.0.1.tar.gz ... checking interprocess_1.3.0.tar.gz ... checking ProTrackR2_0.1.1.tar.gz ... checking haven_2.5.5.tar.gz ... checking RSQLite_2.4.5.tar.gz ... checking gtfstools_1.4.0.tar.gz ... checking jinjar_0.3.2.tar.gz ... checking tweenr_2.0.3.tar.gz ... checking RMariaDB_1.3.4.tar.gz ... checking tidyfast_0.4.0.tar.gz ... checking systemfonts_1.3.1.tar.gz ... checking lotri_1.0.2.tar.gz ... checking redatamx_1.2.1.tar.gz ... checking minty_0.0.5.tar.gz ... checking rar_0.0.3.tar.gz ... checking ggraph_2.2.2.tar.gz ... checking readNSx_0.0.6.tar.gz ... checking RcppAlgos_2.9.3.tar.gz ... checking tidygraph_1.3.1.tar.gz ... checking isoband_0.3.0.tar.gz ... checking marquee_1.2.1.tar.gz ... checking vdiffr_1.0.8.tar.gz ... checking tidyr_1.3.2.tar.gz ... checking particles_0.2.4.tar.gz ... checking readxl_1.4.5.tar.gz ... checking redatam_2.1.2.tar.gz ... checking shide_0.3.0.tar.gz ... checking tardis_0.1.5.tar.gz ... checking SpatialKDE_0.8.2.tar.gz ... checking triptych_0.1.3.tar.gz ... checking websocket_1.4.4.tar.gz ... checking RPostgres_1.4.8.tar.gz ... checking roxygen2_7.3.3.tar.gz ... checking readr_2.1.6.tar.gz ... checking timechange_0.3.0.tar.gz ... checking unigd_0.1.3.tar.gz ... checking RcppBigIntAlgos_1.1.0.tar.gz ... checking lzstring_0.2.0.tar.gz ... checking PhenotypeR_0.3.0.tar.gz ... checking valr_0.9.1.tar.gz ... checking spatialsample_0.6.1.tar.gz ... checking textshaping_1.0.4.tar.gz ... checking OmopViewer_0.6.0.tar.gz ... checking cpp11eigen_0.2.0.tar.gz ... checking svglite_2.2.2.tar.gz ... checking stochtree_0.2.1.tar.gz ... checking asciicast_2.3.1.tar.gz ... checking transformr_0.1.5.tar.gz ... checking twosamples_2.0.1.tar.gz ... checking matrixCorr_0.8.3.tar.gz ... checking readtextgrid_0.2.0.tar.gz ... checking lobstr_1.1.3.tar.gz ... checking tzdb_0.5.0.tar.gz ... checking shinytest2_0.5.0.tar.gz ... checking pudu_0.1.0.tar.gz ... checking pkgbuild_1.4.8.tar.gz ... checking timeplyr_1.1.1.tar.gz ... checking renv_1.1.6.tar.gz ... checking supercells_1.0.0.tar.gz ... checking Rcereal_1.3.2.tar.gz ... checking igraph_2.2.1.tar.gz ... checking rjsoncons_1.3.2.tar.gz ... checking vroom_1.6.7.tar.gz ... Depends: Package: cpp11 Depends: R (>= 4.0.0) Timings: user system elapsed cpp11 104.267 14.976 123.365 Results: Check status summary: WARNING NOTE OK Source packages 0 0 1 Reverse depends 1 11 85 Check results summary: cpp11 ... OK rdepends_adfExplorer ... OK rdepends_ambient ... OK rdepends_area ... OK rdepends_arrow ... NOTE * checking compiled code ... NOTE rdepends_asciicast ... OK rdepends_bases ... OK rdepends_bignum ... OK rdepends_bigrquery ... OK rdepends_binpackr ... OK rdepends_blosc ... OK rdepends_boostmath ... OK rdepends_capybara ... OK rdepends_carbondate ... OK rdepends_cheapr ... OK rdepends_clock ... OK rdepends_CMF ... OK rdepends_cpp11armadillo ... OK rdepends_cpp11bigwig ... OK rdepends_cpp11eigen ... OK rdepends_cpp11qpdf ... NOTE * checking compiled code ... NOTE rdepends_cppdoubles ... OK rdepends_deformula ... NOTE * checking whether package ‘deformula’ can be installed ... [11s/11s] NOTE * checking C++ specification ... NOTE rdepends_densityClust ... OK rdepends_economiccomplexity ... OK rdepends_EGM ... OK rdepends_epiworldR ... OK rdepends_fastplyr ... OK rdepends_frontmatter ... OK rdepends_ggforce ... OK rdepends_ggraph ... OK rdepends_gtfstools ... OK rdepends_haven ... OK rdepends_heumilkr ... OK rdepends_igraph ... NOTE * checking compiled code ... NOTE rdepends_interprocess ... OK rdepends_isoband ... OK rdepends_jinjar ... OK rdepends_leontief ... OK rdepends_literanger ... OK rdepends_lobstr ... NOTE * checking compiled code ... NOTE rdepends_lotri ... OK rdepends_lzstring ... OK rdepends_marquee ... OK rdepends_matrixCorr ... OK rdepends_mice ... OK rdepends_minired ... OK rdepends_minty ... OK rdepends_OmopViewer ... OK rdepends_particles ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_PhenotypeR ... OK rdepends_pkgbuild ... OK rdepends_pkgstats ... OK rdepends_poputils ... OK rdepends_ProTrackR2 ... OK rdepends_pudu ... OK rdepends_rar ... OK rdepends_Rcereal ... OK rdepends_RcppAlgos ... NOTE * checking compiled code ... NOTE rdepends_RcppBigIntAlgos ... OK rdepends_readNSx ... OK rdepends_readODS ... OK rdepends_readr ... OK rdepends_readtextgrid ... OK rdepends_readxl ... OK rdepends_redatam ... OK rdepends_redatamx ... OK rdepends_renv ... OK rdepends_rjsoncons ... OK rdepends_RMariaDB ... OK rdepends_roxygen2 ... OK rdepends_RPostgres ... OK rdepends_RSQLite ... OK rdepends_shide ... OK rdepends_shinytest2 ... OK rdepends_SpatialKDE ... OK rdepends_spatialsample ... OK rdepends_stochtree ... OK rdepends_supercells ... OK rdepends_svglite ... OK rdepends_systemfonts ... OK rdepends_tardis ... OK rdepends_textshaping ... NOTE * checking R code for possible problems ... [4s/4s] NOTE rdepends_tidyfast ... OK rdepends_tidygraph ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_tidyr ... OK rdepends_timechange ... NOTE * checking whether package ‘timechange’ can be installed ... [26s/26s] NOTE * checking C++ specification ... NOTE rdepends_timeplyr ... OK rdepends_transformr ... OK rdepends_triptych ... OK rdepends_tweenr ... OK rdepends_twosamples ... OK rdepends_tzdb ... OK rdepends_unigd ... OK rdepends_valr ... OK rdepends_vdiffr ... NOTE * checking C++ specification ... NOTE rdepends_vroom ... WARNING * checking compiled code ... WARNING rdepends_websocket ... OK Check results changes: Package: CMF Check: CRAN incoming feasibility Old result: NOTE Package: rar Check: CRAN incoming feasibility Old result: NOTE Package: RcppAlgos Check: CRAN incoming feasibility Old result: NOTE Package: textshaping Check: R code for possible problems New result: NOTE Package: tidyfast Check: DESCRIPTION meta-information Old result: NOTE New result: OK Package: twosamples Check: CRAN incoming feasibility Old result: NOTE