downloading reverse dependencies ... downloading adfExplorer_2.0.3.tar.gz ... ok downloading ambient_1.0.2.tar.gz ... ok downloading area_0.2.0.tar.gz ... ok downloading arrow_19.0.1.tar.gz ... ok downloading bignum_0.3.2.tar.gz ... ok downloading bigrquery_1.5.1.tar.gz ... ok downloading binpackr_0.1.1.tar.gz ... ok downloading carbondate_1.0.1.tar.gz ... ok downloading cheapr_1.0.1.tar.gz ... ok downloading clock_0.7.2.tar.gz ... ok downloading CMF_1.0.3.tar.gz ... ok downloading cpp11armadillo_0.4.4.tar.gz ... ok downloading cpp11bigwig_0.1.1.tar.gz ... ok downloading cpp11qpdf_1.3.5.tar.gz ... ok downloading cppdoubles_0.3.0.tar.gz ... ok downloading deformula_0.1.2.tar.gz ... ok downloading densityClust_0.3.3.tar.gz ... ok downloading economiccomplexity_2.0.0.tar.gz ... ok downloading epiworldR_0.6.1.0.tar.gz ... ok downloading fastplyr_0.5.1.tar.gz ... ok downloading ggraph_2.2.1.tar.gz ... ok downloading gtfstools_1.4.0.tar.gz ... ok downloading haven_2.5.4.tar.gz ... ok downloading heumilkr_0.2.0.tar.gz ... ok downloading hilbert_0.2.1.tar.gz ... ok downloading httpgd_2.0.3.tar.gz ... ok downloading igraph_2.1.4.tar.gz ... ok downloading jinjar_0.3.1.tar.gz ... ok downloading kendallknight_0.6.0.tar.gz ... ok downloading literanger_0.1.1.tar.gz ... ok downloading lobstr_1.1.2.tar.gz ... ok downloading lotri_1.0.0.tar.gz ... ok downloading lzstring_0.1.3.tar.gz ... ok downloading marquee_1.0.0.tar.gz ... ok downloading meltr_1.0.2.tar.gz ... ok downloading mice_3.17.0.tar.gz ... ok downloading minired_1.0.1.tar.gz ... ok downloading minty_0.0.5.tar.gz ... ok downloading particles_0.2.4.tar.gz ... ok downloading poputils_0.3.3.tar.gz ... ok downloading ProTrackR2_0.0.5.tar.gz ... ok downloading rar_0.0.3.tar.gz ... ok downloading RcppAlgos_2.9.3.tar.gz ... ok downloading RcppBigIntAlgos_1.1.0.tar.gz ... ok downloading readNSx_0.0.5.tar.gz ... ok downloading readODS_2.3.2.tar.gz ... ok downloading readr_2.1.5.tar.gz ... ok downloading readxl_1.4.4.tar.gz ... ok downloading redatam_2.1.1.tar.gz ... ok downloading redatamx_1.1.0.tar.gz ... ok downloading rjsoncons_1.3.1.tar.gz ... ok downloading RMariaDB_1.3.4.tar.gz ... ok downloading roxygen2_7.3.2.tar.gz ... ok downloading RPostgres_1.4.8.tar.gz ... ok downloading RSQLite_2.3.9.tar.gz ... ok downloading shide_0.2.1.tar.gz ... ok downloading shinytest2_0.3.2.tar.gz ... ok downloading sift_0.1.0.tar.gz ... ok downloading SpatialKDE_0.8.2.tar.gz ... ok downloading spatialsample_0.6.0.tar.gz ... ok downloading stochtree_0.1.1.tar.gz ... ok downloading supercells_1.0.0.tar.gz ... ok downloading svglite_2.1.3.tar.gz ... ok downloading systemfonts_1.2.1.tar.gz ... ok downloading tardis_0.1.4.tar.gz ... ok downloading textshaping_1.0.0.tar.gz ... ok downloading tidyfast_0.4.0.tar.gz ... ok downloading tidygraph_1.3.1.tar.gz ... ok downloading tidyr_1.3.1.tar.gz ... ok downloading timechange_0.3.0.tar.gz ... ok downloading timeplyr_1.0.0.tar.gz ... ok downloading tipitaka_0.1.2.tar.gz ... ok downloading transformr_0.1.5.tar.gz ... ok downloading triangulr_1.2.1.tar.gz ... ok downloading triptych_0.1.3.tar.gz ... ok downloading tweenr_2.0.3.tar.gz ... ok downloading twosamples_2.0.1.tar.gz ... ok downloading tzdb_0.4.0.tar.gz ... ok downloading unigd_0.1.3.tar.gz ... ok downloading vdiffr_1.0.8.tar.gz ... ok downloading vroom_1.6.5.tar.gz ... ok downloading websocket_1.4.2.tar.gz ... ok downloading asciicast_2.3.1.tar.gz ... ok downloading cpp11eigen_0.2.0.tar.gz ... ok downloading pkgbuild_1.4.6.tar.gz ... ok downloading pudu_0.1.0.tar.gz ... ok downloading Rcereal_1.3.2.tar.gz ... ok downloading renv_1.1.2.tar.gz ... ok installing dependencies ‘adfExplorer’, ‘cheapr’, ‘cpp11’, ‘cppdoubles’, ‘decor’, ‘distro’, ‘fastplyr’, ‘gtfsio’, ‘hedgehog’, ‘influenceR’, ‘jsonlite’, ‘literanger’, ‘modules’, ‘monotone’, ‘mopac’, ‘netplot’, ‘netrankr’, ‘NetSwan’, ‘Rcereal’, ‘RcppBigIntAlgos’, ‘repurrrsive’, ‘rvec’, ‘sfnetworks’, ‘shinyvalidate’, ‘unigd’ Warning: package ‘NetSwan’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages begin installing package ‘distro’ begin installing package ‘decor’ begin installing package ‘jsonlite’ begin installing package ‘cpp11’ begin installing package ‘Rcereal’ begin installing package ‘rvec’ begin installing package ‘mopac’ begin installing package ‘repurrrsive’ begin installing package ‘monotone’ begin installing package ‘modules’ * installing *source* package ‘distro’ ... ** this is package ‘distro’ version ‘0.1.0’ ** package ‘distro’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (distro) * installing *source* package ‘mopac’ ... ** this is package ‘mopac’ version ‘0.1.0’ ** package ‘mopac’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mopac) * installing *source* package ‘cpp11’ ... ** this is package ‘cpp11’ version ‘0.5.2’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cpp11) begin installing package ‘netplot’ begin installing package ‘sfnetworks’ begin installing package ‘influenceR’ begin installing package ‘netrankr’ * installing *source* package ‘modules’ ... ** this is package ‘modules’ version ‘0.13.0’ ** package ‘modules’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modules) begin installing package ‘adfExplorer’ begin installing package ‘cheapr’ begin installing package ‘RcppBigIntAlgos’ begin installing package ‘cppdoubles’ * installing *source* package ‘Rcereal’ ... ** this is package ‘Rcereal’ version ‘1.3.2’ ** package ‘Rcereal’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rcereal) begin installing package ‘literanger’ * installing *source* package ‘monotone’ ... ** this is package ‘monotone’ version ‘0.1.2’ ** package ‘monotone’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpsDHLPQ/R.INSTALL3d962026bc95a8/monotone/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bimonotoneC.c -o bimonotoneC.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c legacyC.c -o legacyC.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c monotoneC.c -o monotoneC.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c unimonotoneC.c -o unimonotoneC.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o monotone.so bimonotoneC.o init.o legacyC.o monotoneC.o unimonotoneC.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpsDHLPQ/R.INSTALL3d962026bc95a8/monotone/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-monotone/00new/monotone/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (monotone) * installing *source* package ‘repurrrsive’ ... ** this is package ‘repurrrsive’ version ‘1.1.0’ ** package ‘repurrrsive’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (repurrrsive) * installing *source* package ‘decor’ ... ** this is package ‘decor’ version ‘1.0.2’ ** package ‘decor’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-16) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZaI8fS/R.INSTALL3d96135215d8e7/decor/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c blank_comments.cpp -o blank_comments.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c parse_cpp_function.cpp -o parse_cpp_function.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o decor.so blank_comments.o init.o parse_cpp_function.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZaI8fS/R.INSTALL3d96135215d8e7/decor/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-decor/00new/decor/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (decor) * installing *source* package ‘influenceR’ ... ** this is package ‘influenceR’ version ‘0.1.5’ ** package ‘influenceR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpciML4u/R.INSTALL3d984479ccd2bf/influenceR/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bridging.c -o bridging.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c keyplayer-utils.c -o keyplayer-utils.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c keyplayer.c -o keyplayer.o keyplayer.c: In function ‘keyplayer_driver’: keyplayer.c:33:8: warning: unused variable ‘allsets’ [-Wunused-variable] 33 | int *allsets; | ^~~~~~~ keyplayer.c:32:11: warning: unused variable ‘fits’ [-Wunused-variable] 32 | double *fits; | ^~~~ keyplayer.c:30:31: warning: unused variable ‘stop’ [-Wunused-variable] 30 | int np, rank, new_rank = 0, stop; | ^~~~ keyplayer.c:30:17: warning: unused variable ‘new_rank’ [-Wunused-variable] 30 | int np, rank, new_rank = 0, stop; | ^~~~~~~~ keyplayer.c:30:11: warning: unused variable ‘rank’ [-Wunused-variable] 30 | int np, rank, new_rank = 0, stop; | ^~~~ keyplayer.c:30:7: warning: unused variable ‘np’ [-Wunused-variable] 30 | int np, rank, new_rank = 0, stop; | ^~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c packagename_init.c -o packagename_init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c prefix_sums.c -o prefix_sums.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c process_sparse.c -o process_sparse.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c snap_wrapper.c -o snap_wrapper.o snap_wrapper.c: In function ‘snap_keyplayer_R’: snap_wrapper.c:194:7: warning: unused variable ‘r’ [-Wunused-variable] 194 | int r = read_graph_from_edgelist(&G, E, n, m); | ^ snap_wrapper.c: In function ‘snap_bridging_R’: snap_wrapper.c:223:7: warning: unused variable ‘r’ [-Wunused-variable] 223 | int r = read_graph_from_edgelist(&G, E, n, m); | ^ snap_wrapper.c:219:5: warning: unused variable ‘mpi’ [-Wunused-variable] 219 | mpi = INTEGER(sMPI)[0]; // use mpi? | ^~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vertex_betweenness_centrality.c -o vertex_betweenness_centrality.o vertex_betweenness_centrality.c: In function ‘vertex_betweenness_centrality_parBFS’: vertex_betweenness_centrality.c:81:14: warning: variable ‘stream’ set but not used [-Wunused-but-set-variable] 81 | int* stream; | ^~~~~~ vertex_betweenness_centrality.c:66:9: warning: unused variable ‘seed’ [-Wunused-variable] 66 | int seed = 2387; | ^~~~ vertex_betweenness_centrality.c: In function ‘vertex_betweenness_centrality_simple’: vertex_betweenness_centrality.c:549:13: warning: unused variable ‘myLock’ [-Wunused-variable] 549 | int myLock; | ^~~~~~ vertex_betweenness_centrality.c:543:14: warning: variable ‘stream’ set but not used [-Wunused-but-set-variable] 543 | int* stream; | ^~~~~~ vertex_betweenness_centrality.c:519:9: warning: unused variable ‘seed’ [-Wunused-variable] 519 | int seed = 2387; | ^~~~ vertex_betweenness_centrality.c:514:10: warning: unused variable ‘chunkSize’ [-Wunused-variable] 514 | long chunkSize; | ^~~~~~~~~ gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o influenceR.so bridging.o keyplayer-utils.o keyplayer.o packagename_init.o prefix_sums.o process_sparse.o snap_wrapper.o vertex_betweenness_centrality.o -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpciML4u/R.INSTALL3d984479ccd2bf/influenceR/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-influenceR/00new/influenceR/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (influenceR) * installing *source* package ‘cppdoubles’ ... ** this is package ‘cppdoubles’ version ‘0.3.0’ ** package ‘cppdoubles’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmproZbKM/R.INSTALL3d984c9b78db4/cppdoubles/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cppdoubles.cpp -o cppdoubles.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o cppdoubles.so cpp11.o cppdoubles.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmproZbKM/R.INSTALL3d984c9b78db4/cppdoubles/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-cppdoubles/00new/cppdoubles/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cppdoubles) * installing *source* package ‘rvec’ ... ** this is package ‘rvec’ version ‘0.0.7’ ** package ‘rvec’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rvec) * installing *source* package ‘jsonlite’ ... ** this is package ‘jsonlite’ version ‘1.9.1’ ** package ‘jsonlite’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpd1NgTB/R.INSTALL3d96246425c9f/jsonlite/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c base64.c -o base64.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c collapse_array.c -o collapse_array.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c collapse_object.c -o collapse_object.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c collapse_pretty.c -o collapse_pretty.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c escape_chars.c -o escape_chars.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c integer64_to_na.c -o integer64_to_na.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c is_datelist.c -o is_datelist.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c is_recordlist.c -o is_recordlist.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c is_scalarlist.c -o is_scalarlist.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c modp_numtoa.c -o modp_numtoa.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c null_to_na.c -o null_to_na.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c num_to_char.c -o num_to_char.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c parse.c -o parse.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c prettify.c -o prettify.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c push_parser.c -o push_parser.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c r-base64.c -o r-base64.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c row_collapse.c -o row_collapse.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c transpose_list.c -o transpose_list.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c validate.c -o validate.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yajl/yajl.c -o yajl/yajl.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yajl/yajl_buf.c -o yajl/yajl_buf.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yajl/yajl_encode.c -o yajl/yajl_encode.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yajl/yajl_gen.c -o yajl/yajl_gen.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yajl/yajl_lex.c -o yajl/yajl_lex.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yajl/yajl_parser.c -o yajl/yajl_parser.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c yajl/yajl_tree.c -o yajl/yajl_tree.o ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpd1NgTB/R.INSTALL3d96246425c9f/jsonlite/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-jsonlite/00new/jsonlite/libs ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘asJSON’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘asJSON’ with signature ‘"ITime"’: no definition for class “ITime” in method for ‘asJSON’ with signature ‘"hms"’: no definition for class “hms” in method for ‘asJSON’ with signature ‘"json"’: no definition for class “json” in method for ‘asJSON’ with signature ‘"integer64"’: no definition for class “integer64” in method for ‘asJSON’ with signature ‘"pairlist"’: no definition for class “pairlist” in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” in method for ‘asJSON’ with signature ‘"scalar"’: no definition for class “scalar” in method for ‘asJSON’ with signature ‘"sf"’: no definition for class “sf” in method for ‘asJSON’ with signature ‘"sfc"’: no definition for class “sfc” in method for ‘asJSON’ with signature ‘"vctrs_vctr"’: no definition for class “vctrs_vctr” ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jsonlite) begin installing package ‘hedgehog’ begin installing package ‘shinyvalidate’ begin installing package ‘gtfsio’ begin installing package ‘unigd’ * installing *source* package ‘netplot’ ... ** this is package ‘netplot’ version ‘0.3-0’ ** package ‘netplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (netplot) * installing *source* package ‘shinyvalidate’ ... ** this is package ‘shinyvalidate’ version ‘0.1.3’ ** package ‘shinyvalidate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyvalidate) * installing *source* package ‘gtfsio’ ... ** this is package ‘gtfsio’ version ‘1.2.0’ ** package ‘gtfsio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gtfsio) * installing *source* package ‘hedgehog’ ... ** this is package ‘hedgehog’ version ‘0.1’ ** package ‘hedgehog’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hedgehog) * installing *source* package ‘sfnetworks’ ... ** this is package ‘sfnetworks’ version ‘0.6.5’ ** package ‘sfnetworks’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sfnetworks) * installing *source* package ‘adfExplorer’ ... ** this is package ‘adfExplorer’ version ‘2.0.3’ ** package ‘adfExplorer’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpTHaMAZ/R.INSTALL3d984b1f0bdcb1/adfExplorer/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_bitm.c -o adflib/adf_bitm.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_cache.c -o adflib/adf_cache.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_dev.c -o adflib/adf_dev.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_dev_dump.c -o adflib/adf_dev_dump.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_dev_flop.c -o adflib/adf_dev_flop.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_dev_hd.c -o adflib/adf_dev_hd.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_dir.c -o adflib/adf_dir.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_file.c -o adflib/adf_file.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_file_block.c -o adflib/adf_file_block.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_nativ.c -o adflib/adf_nativ.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_raw.c -o adflib/adf_raw.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_salv.c -o adflib/adf_salv.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_str.c -o adflib/adf_str.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_util.c -o adflib/adf_util.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/adf_vol.c -o adflib/adf_vol.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adflib/debug_util.c -o adflib/debug_util.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -pedantic -mtune=native -c adf_file_info.cpp -o adf_file_info.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -pedantic -mtune=native -c adf_file_operators.cpp -o adf_file_operators.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -pedantic -mtune=native -c block_adf.cpp -o block_adf.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -pedantic -mtune=native -c dev_format.cpp -o dev_format.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -pedantic -mtune=native -c dev_info.cpp -o dev_info.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -pedantic -mtune=native -c open_adf.cpp -o open_adf.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iadflib -fpic -g -O2 -Wall -pedantic -mtune=native -c open_adf_file.cpp -o open_adf_file.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o adfExplorer.so adflib/adf_bitm.o adflib/adf_cache.o adflib/adf_dev.o adflib/adf_dev_dump.o adflib/adf_dev_flop.o adflib/adf_dev_hd.o adflib/adf_dir.o adflib/adf_file.o adflib/adf_file_block.o adflib/adf_nativ.o adflib/adf_raw.o adflib/adf_salv.o adflib/adf_str.o adflib/adf_util.o adflib/adf_vol.o adflib/debug_util.o adf_file_info.o adf_file_operators.o block_adf.o cpp11.o dev_format.o dev_info.o open_adf.o open_adf_file.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpTHaMAZ/R.INSTALL3d984b1f0bdcb1/adfExplorer/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-adfExplorer/00new/adfExplorer/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (adfExplorer) * installing *source* package ‘cheapr’ ... ** this is package ‘cheapr’ version ‘1.0.1’ ** package ‘cheapr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEAnlPa/R.INSTALL3d984672edccac/cheapr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c altrep.cpp -o altrep.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c attrs.cpp -o attrs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c gcd.cpp -o gcd.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c int64.cpp -o int64.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lag.cpp -o lag.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lists.cpp -o lists.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nas.cpp -o nas.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c scalars.cpp -o scalars.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sequences.cpp -o sequences.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c set_math.cpp -o set_math.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sset.cpp -o sset.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c which.cpp -o which.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o cheapr.so altrep.o attrs.o cpp11.o gcd.o int64.o lag.o lists.o nas.o scalars.o sequences.o set_math.o sset.o utils.o which.o -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEAnlPa/R.INSTALL3d984672edccac/cheapr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-cheapr/00new/cheapr/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cheapr) begin installing package ‘fastplyr’ * installing *source* package ‘RcppBigIntAlgos’ ... ** this is package ‘RcppBigIntAlgos’ version ‘1.1.0’ ** package ‘RcppBigIntAlgos’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUJ3XYn/R.INSTALL3d9848ebcf447/RcppBigIntAlgos/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ConvertUtils.cpp -o ConvertUtils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Divisors.cpp -o Divisors.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DivisorsUtils.cpp -o DivisorsUtils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c GmpConvert.cpp -o GmpConvert.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c LenstraECM.cpp -o LenstraECM.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c MultiPoly.cpp -o MultiPoly.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c NumThreads.cpp -o NumThreads.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PollardRho.cpp -o PollardRho.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Polynomial.cpp -o Polynomial.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PrimeFactorUtils.cpp -o PrimeFactorUtils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PrimeFactorization.cpp -o PrimeFactorization.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c QuadraticSieve.cpp -o QuadraticSieve.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ReduceMatrix.cpp -o ReduceMatrix.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SieveUtils.cpp -o SieveUtils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SolutionSearch.cpp -o SolutionSearch.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c StdConvert.cpp -o StdConvert.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TonelliShanks.cpp -o TonelliShanks.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o RcppBigIntAlgos.so ConvertUtils.o Divisors.o DivisorsUtils.o GmpConvert.o LenstraECM.o MultiPoly.o NumThreads.o PollardRho.o Polynomial.o PrimeFactorUtils.o PrimeFactorization.o QuadraticSieve.o ReduceMatrix.o SieveUtils.o SolutionSearch.o StdConvert.o TonelliShanks.o cpp11.o -lgmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUJ3XYn/R.INSTALL3d9848ebcf447/RcppBigIntAlgos/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-RcppBigIntAlgos/00new/RcppBigIntAlgos/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppBigIntAlgos) * installing *source* package ‘fastplyr’ ... ** this is package ‘fastplyr’ version ‘0.5.1’ ** package ‘fastplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjcLgQy/R.INSTALL3d9ebf2748c244/fastplyr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fastplyr.cpp -o fastplyr.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fastplyr.so cpp11.o fastplyr.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjcLgQy/R.INSTALL3d9ebf2748c244/fastplyr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fastplyr/00new/fastplyr/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastplyr) * installing *source* package ‘literanger’ ... ** this is package ‘literanger’ version ‘0.1.1’ ** package ‘literanger’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQYRm6f/R.INSTALL3d98582f9df1f4/literanger/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_recheck/Library/Rcereal/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../src -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_recheck/Library/Rcereal/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../src -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11_io.cpp -o cpp11_io.o In file included from ../src/literanger/Forest.defn.h:35, from ../src/literanger/ForestClassification.defn.h:39, from literanger/ForestClassification.h:18, from cpp11_io.cpp:49: ../src/literanger/TreeBase.defn.h: In member function ‘bool literanger::TreeBase::split_node(size_t, size_t, size_t, std::shared_ptr, literanger::key_vector&)’: ../src/literanger/TreeBase.defn.h:429:44: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 429 | const ull_bitenc partition_key = *((unsigned long long *)(&split_value)); | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:51, from cpp11_io.decl.h:33, from cpp11_io.cpp:30: In static member function ‘static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const double; _Up = double; bool _IsMove = false]’, inlined from ‘_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from ‘_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:548:42, inlined from ‘_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator >; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:555:31, inlined from ‘_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator >; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:651:7, inlined from ‘static _ForwardIterator std::__uninitialized_copy::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = double*]’ at /usr/include/c++/14/bits/stl_uninitialized.h:147:27, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = double*]’ at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = double*; _Tp = double]’ at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/14/bits/stl_vector.h:606:31, inlined from ‘std::vector literanger::adjust_pvalues(const std::vector&)’ at ../src/literanger/utility_math.h:98:30: /usr/include/c++/14/bits/stl_algobase.h:452:30: warning: ‘void* __builtin_memmove(void*, const void*, long unsigned int)’ forming offset 8 is out of the bounds [0, 8] [-Warray-bounds=] 452 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_recheck/Library/Rcereal/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../src -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11_predict.cpp -o cpp11_predict.o In file included from ../src/literanger/Forest.defn.h:35, from ../src/literanger/ForestClassification.defn.h:39, from literanger/ForestClassification.h:18, from cpp11_predict.cpp:47: ../src/literanger/TreeBase.defn.h: In member function ‘bool literanger::TreeBase::split_node(size_t, size_t, size_t, std::shared_ptr, literanger::key_vector&)’: ../src/literanger/TreeBase.defn.h:429:44: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 429 | const ull_bitenc partition_key = *((unsigned long long *)(&split_value)); | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/specfun.h:43, from /usr/include/c++/14/cmath:3906, from /home/hornik/tmp/CRAN_recheck/Library/cpp11/include/cpp11/as.hpp:3, from /home/hornik/tmp/CRAN_recheck/Library/cpp11/include/cpp11.hpp:5, from cpp11_predict.decl.h:35, from cpp11_predict.cpp:30: In static member function ‘static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const double; _Up = double; bool _IsMove = false]’, inlined from ‘_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from ‘_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:548:42, inlined from ‘_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator >; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:555:31, inlined from ‘_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator >; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:651:7, inlined from ‘static _ForwardIterator std::__uninitialized_copy::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = double*]’ at /usr/include/c++/14/bits/stl_uninitialized.h:147:27, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = double*]’ at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = double*; _Tp = double]’ at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/14/bits/stl_vector.h:606:31, inlined from ‘std::vector literanger::adjust_pvalues(const std::vector&)’ at ../src/literanger/utility_math.h:98:30: /usr/include/c++/14/bits/stl_algobase.h:452:30: warning: ‘void* __builtin_memmove(void*, const void*, long unsigned int)’ forming offset 8 is out of the bounds [0, 8] [-Warray-bounds=] 452 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_recheck/Library/Rcereal/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../src -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11_train.cpp -o cpp11_train.o In file included from ../src/literanger/Forest.defn.h:35, from ../src/literanger/ForestClassification.defn.h:39, from literanger/ForestClassification.h:18, from cpp11_train.cpp:45: ../src/literanger/TreeBase.defn.h: In member function ‘bool literanger::TreeBase::split_node(size_t, size_t, size_t, std::shared_ptr, literanger::key_vector&)’: ../src/literanger/TreeBase.defn.h:429:44: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 429 | const ull_bitenc partition_key = *((unsigned long long *)(&split_value)); | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_uninitialized.h:63, from /usr/include/c++/14/memory:69, from cpp11_train.decl.h:33, from cpp11_train.cpp:30: In static member function ‘static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = const double; _Up = double; bool _IsMove = false]’, inlined from ‘_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:521:30, inlined from ‘_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = const double*; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:548:42, inlined from ‘_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = __gnu_cxx::__normal_iterator >; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:555:31, inlined from ‘_OI std::copy(_II, _II, _OI) [with _II = __gnu_cxx::__normal_iterator >; _OI = double*]’ at /usr/include/c++/14/bits/stl_algobase.h:651:7, inlined from ‘static _ForwardIterator std::__uninitialized_copy::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = double*]’ at /usr/include/c++/14/bits/stl_uninitialized.h:147:27, inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = double*]’ at /usr/include/c++/14/bits/stl_uninitialized.h:185:15, inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = double*; _Tp = double]’ at /usr/include/c++/14/bits/stl_uninitialized.h:373:37, inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/14/bits/stl_vector.h:606:31, inlined from ‘std::vector literanger::adjust_pvalues(const std::vector&)’ at ../src/literanger/utility_math.h:98:30: /usr/include/c++/14/bits/stl_algobase.h:452:30: warning: ‘void* __builtin_memmove(void*, const void*, long unsigned int)’ forming offset 8 is out of the bounds [0, 8] [-Warray-bounds=] 452 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o literanger.so cpp11.o cpp11_io.o cpp11_predict.o cpp11_train.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQYRm6f/R.INSTALL3d98582f9df1f4/literanger/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-literanger/00new/literanger/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (literanger) * installing *source* package ‘unigd’ ... ** this is package ‘unigd’ version ‘0.1.3’ ** package ‘unigd’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 Using PKG_LIBS=-lcairo -lfreetype Using PKG_LIBTIFF_CFLAGS=-I/usr/include/x86_64-linux-gnu -I/usr/include/webp Using PKG_LIBTIFF_LIBS=-ltiff -ltiffxx ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpTjf6QX/R.INSTALL3d9bf057b7e7f2/unigd/src' rm -f unigd.so base_64.o compress.o cpp11.o draw_data.o page_store.o plot_history.o r_thread_posix.o r_thread_win32.o renderer_cairo.o renderer_json.o renderer_meta.o renderer_strings.o renderer_svg.o renderer_tikz.o renderers.o unigd.o unigd_dev.o unigd_external.o uuid.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c base_64.cpp -o base_64.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c compress.cpp -o compress.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c draw_data.cpp -o draw_data.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c page_store.cpp -o page_store.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c plot_history.cpp -o plot_history.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c r_thread_posix.cpp -o r_thread_posix.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c r_thread_win32.cpp -o r_thread_win32.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c renderer_cairo.cpp -o renderer_cairo.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c renderer_json.cpp -o renderer_json.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c renderer_meta.cpp -o renderer_meta.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c renderer_strings.cpp -o renderer_strings.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c renderer_svg.cpp -o renderer_svg.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c renderer_tikz.cpp -o renderer_tikz.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c renderers.cpp -o renderers.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c unigd.cpp -o unigd.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c unigd_dev.cpp -o unigd_dev.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c unigd_external.cpp -o unigd_external.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Ilib -I../inst/include -DFMT_HEADER_ONLY -I'/home/hornik/tmp/CRAN_recheck/Library/cpp11/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c uuid.cpp -o uuid.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o unigd.so base_64.o compress.o cpp11.o draw_data.o page_store.o plot_history.o r_thread_posix.o r_thread_win32.o renderer_cairo.o renderer_json.o renderer_meta.o renderer_strings.o renderer_svg.o renderer_tikz.o renderers.o unigd.o unigd_dev.o unigd_external.o uuid.o -lcairo -lfreetype -ltiff -ltiffxx -lpng -lz -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpTjf6QX/R.INSTALL3d9bf057b7e7f2/unigd/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-unigd/00new/unigd/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (unigd) * installing *source* package ‘netrankr’ ... ** this is package ‘netrankr’ version ‘1.2.4’ ** package ‘netrankr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUwsGTv/R.INSTALL3d98424d0964be/netrankr/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c approx_expected.cpp -o approx_expected.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c approxrelative.cpp -o approxrelative.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c checkPairs.cpp -o checkPairs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c dependCurFlow.cpp -o dependCurFlow.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c dependRspn.cpp -o dependRspn.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c dependency.cpp -o dependency.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c latticeOfIdeals.cpp -o latticeOfIdeals.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c listingIdeals.cpp -o listingIdeals.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c mcmc_rank.cpp -o mcmc_rank.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nialgo.cpp -o nialgo.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c pdalgo.cpp -o pdalgo.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c preserve.cpp -o preserve.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c rankProbs.cpp -o rankProbs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c rankings.cpp -o rankings.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c resistanceDistance.cpp -o resistanceDistance.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c transreduct.cpp -o transreduct.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c treeOfIdeals.cpp -o treeOfIdeals.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o netrankr.so RcppExports.o approx_expected.o approxrelative.o checkPairs.o dependCurFlow.o dependRspn.o dependency.o latticeOfIdeals.o listingIdeals.o mcmc_rank.o nialgo.o pdalgo.o preserve.o rankProbs.o rankings.o resistanceDistance.o transreduct.o treeOfIdeals.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUwsGTv/R.INSTALL3d98424d0964be/netrankr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-netrankr/00new/netrankr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (netrankr) checking cpp11_0.5.2.tar.gz ... checking adfExplorer_2.0.3.tar.gz ... checking ambient_1.0.2.tar.gz ... checking area_0.2.0.tar.gz ... checking arrow_19.0.1.tar.gz ... checking bignum_0.3.2.tar.gz ... checking bigrquery_1.5.1.tar.gz ... checking binpackr_0.1.1.tar.gz ... checking carbondate_1.0.1.tar.gz ... checking cheapr_1.0.1.tar.gz ... checking clock_0.7.2.tar.gz ... checking CMF_1.0.3.tar.gz ... checking cpp11armadillo_0.4.4.tar.gz ... checking cpp11bigwig_0.1.1.tar.gz ... checking cpp11qpdf_1.3.5.tar.gz ... checking cppdoubles_0.3.0.tar.gz ... checking deformula_0.1.2.tar.gz ... checking densityClust_0.3.3.tar.gz ... checking economiccomplexity_2.0.0.tar.gz ... checking epiworldR_0.6.1.0.tar.gz ... checking fastplyr_0.5.1.tar.gz ... checking ggraph_2.2.1.tar.gz ... checking gtfstools_1.4.0.tar.gz ... checking haven_2.5.4.tar.gz ... checking heumilkr_0.2.0.tar.gz ... checking hilbert_0.2.1.tar.gz ... checking httpgd_2.0.3.tar.gz ... checking igraph_2.1.4.tar.gz ... checking meltr_1.0.2.tar.gz ... checking lobstr_1.1.2.tar.gz ... checking particles_0.2.4.tar.gz ... checking RcppAlgos_2.9.3.tar.gz ... checking RcppBigIntAlgos_1.1.0.tar.gz ... checking roxygen2_7.3.2.tar.gz ... checking poputils_0.3.3.tar.gz ... checking readNSx_0.0.5.tar.gz ... checking literanger_0.1.1.tar.gz ... checking SpatialKDE_0.8.2.tar.gz ... checking RMariaDB_1.3.4.tar.gz ... checking kendallknight_0.6.0.tar.gz ... checking redatamx_1.1.0.tar.gz ... checking marquee_1.0.0.tar.gz ... checking rjsoncons_1.3.1.tar.gz ... checking readxl_1.4.4.tar.gz ... checking minired_1.0.1.tar.gz ... checking svglite_2.1.3.tar.gz ... checking transformr_0.1.5.tar.gz ... checking shinytest2_0.3.2.tar.gz ... checking tzdb_0.4.0.tar.gz ... checking RPostgres_1.4.8.tar.gz ... checking jinjar_0.3.1.tar.gz ... checking ProTrackR2_0.0.5.tar.gz ... checking tidygraph_1.3.1.tar.gz ... checking readODS_2.3.2.tar.gz ... checking tardis_0.1.4.tar.gz ... checking lzstring_0.1.3.tar.gz ... checking tipitaka_0.1.2.tar.gz ... checking rar_0.0.3.tar.gz ... checking tidyfast_0.4.0.tar.gz ... checking vdiffr_1.0.8.tar.gz ... checking vroom_1.6.5.tar.gz ... checking sift_0.1.0.tar.gz ... checking stochtree_0.1.1.tar.gz ... checking tweenr_2.0.3.tar.gz ... checking readr_2.1.5.tar.gz ... checking pkgbuild_1.4.6.tar.gz ... checking triangulr_1.2.1.tar.gz ... checking tidyr_1.3.1.tar.gz ... checking pudu_0.1.0.tar.gz ... checking shide_0.2.1.tar.gz ... checking websocket_1.4.2.tar.gz ... checking supercells_1.0.0.tar.gz ... checking timechange_0.3.0.tar.gz ... checking redatam_2.1.1.tar.gz ... checking mice_3.17.0.tar.gz ... checking cpp11eigen_0.2.0.tar.gz ... checking triptych_0.1.3.tar.gz ... checking twosamples_2.0.1.tar.gz ... checking Rcereal_1.3.2.tar.gz ... checking minty_0.0.5.tar.gz ... checking unigd_0.1.3.tar.gz ... checking textshaping_1.0.0.tar.gz ... checking timeplyr_1.0.0.tar.gz ... checking systemfonts_1.2.1.tar.gz ... checking RSQLite_2.3.9.tar.gz ... checking asciicast_2.3.1.tar.gz ... checking lotri_1.0.0.tar.gz ... checking spatialsample_0.6.0.tar.gz ... checking renv_1.1.2.tar.gz ... Depends: Package: cpp11 Depends: R (>= 4.0.0) Timings: user system elapsed cpp11 96.91 13.854 115.267 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 25 63 Check results summary: cpp11 ... OK rdepends_adfExplorer ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_ambient ... NOTE * checking C++ specification ... NOTE rdepends_area ... OK rdepends_arrow ... NOTE * checking compiled code ... NOTE rdepends_asciicast ... OK rdepends_bignum ... OK rdepends_bigrquery ... NOTE * checking Rd cross-references ... NOTE rdepends_binpackr ... OK rdepends_carbondate ... OK rdepends_cheapr ... NOTE * checking compiled code ... NOTE rdepends_clock ... OK rdepends_CMF ... OK rdepends_cpp11armadillo ... OK rdepends_cpp11bigwig ... OK rdepends_cpp11eigen ... OK rdepends_cpp11qpdf ... OK rdepends_cppdoubles ... OK rdepends_deformula ... NOTE * checking C++ specification ... NOTE rdepends_densityClust ... OK rdepends_economiccomplexity ... OK rdepends_epiworldR ... OK rdepends_fastplyr ... OK rdepends_ggraph ... OK rdepends_gtfstools ... OK rdepends_haven ... OK rdepends_heumilkr ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_hilbert ... NOTE * checking C++ specification ... NOTE rdepends_httpgd ... OK rdepends_igraph ... NOTE * checking compiled code ... NOTE rdepends_jinjar ... OK rdepends_kendallknight ... OK rdepends_literanger ... OK rdepends_lobstr ... NOTE * checking C++ specification ... NOTE * checking compiled code ... NOTE rdepends_lotri ... OK rdepends_lzstring ... OK rdepends_marquee ... OK rdepends_meltr ... NOTE * checking Rd cross-references ... NOTE * checking compiled code ... NOTE rdepends_mice ... OK rdepends_minired ... OK rdepends_minty ... OK rdepends_particles ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_pkgbuild ... OK rdepends_poputils ... OK rdepends_ProTrackR2 ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_pudu ... OK rdepends_rar ... OK rdepends_Rcereal ... OK rdepends_RcppAlgos ... OK rdepends_RcppBigIntAlgos ... OK rdepends_readNSx ... OK rdepends_readODS ... OK rdepends_readr ... NOTE * checking Rd cross-references ... NOTE * checking compiled code ... NOTE rdepends_readxl ... OK rdepends_redatam ... OK rdepends_redatamx ... OK rdepends_renv ... OK rdepends_rjsoncons ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_RMariaDB ... OK rdepends_roxygen2 ... OK rdepends_RPostgres ... OK rdepends_RSQLite ... OK rdepends_shide ... OK rdepends_shinytest2 ... NOTE * checking Rd cross-references ... NOTE rdepends_sift ... NOTE * checking C++ specification ... NOTE rdepends_SpatialKDE ... OK rdepends_spatialsample ... OK rdepends_stochtree ... OK rdepends_supercells ... OK rdepends_svglite ... NOTE * checking C++ specification ... NOTE rdepends_systemfonts ... OK rdepends_tardis ... NOTE * checking C++ specification ... NOTE rdepends_textshaping ... OK rdepends_tidyfast ... OK rdepends_tidygraph ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_tidyr ... NOTE * checking compiled code ... NOTE rdepends_timechange ... OK rdepends_timeplyr ... OK rdepends_tipitaka ... NOTE * checking C++ specification ... NOTE rdepends_transformr ... OK rdepends_triangulr ... NOTE * checking C++ specification ... NOTE rdepends_triptych ... OK rdepends_tweenr ... OK rdepends_twosamples ... OK rdepends_tzdb ... OK rdepends_unigd ... OK rdepends_vdiffr ... NOTE * checking C++ specification ... NOTE rdepends_vroom ... NOTE * checking compiled code ... NOTE rdepends_websocket ... OK