Package check result: OK

Changes to worse in reverse depends:

Package: GHRexplore
Check: tests
New result: ERROR
    Running ‘testthat.R’ [24s/24s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > # This file is part of the standard setup for testthat.
    > # It is recommended that you do not modify it.
    > #
    > # Where should you do additional test configuration?
    > # Learn more about the roles of various files in:
    > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
    > # * https://testthat.r-lib.org/articles/special-files.html
    > 
    > library(testthat)
    > library(GHRexplore)
    > 
    > test_check("GHRexplore")
    [ FAIL 2 | WARN 1 | SKIP 0 | PASS 258 ]
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Failure ('test-plot_combine.R:63:3'): plot_combine works with combine_legend = TRUE ──
    `result <- plot_combine(plots, combine_legend = TRUE)` did not throw the expected warning.
    ── Failure ('test-plot_combine.R:69:3'): plot_combine with both combine_legend and combine_xaxis = TRUE ──
    `... <- NULL` did not throw the expected warning.
    
    [ FAIL 2 | WARN 1 | SKIP 0 | PASS 258 ]
    Error: Test failures
    Execution halted

Package: SCIntRuler
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘SCIntRuler.Rmd’ using rmarkdown
  Performing log-normalization
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  Calculating gene variances
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  Calculating feature variances of standardized and clipped values
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  
    |                                                                            
    |                                                                      |   0%
    |                                                                            
    |=======================                                               |  33%
    |                                                                            
    |===============================================                       |  67%
    |                                                                            
    |======================================================================| 100%
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  Using method 'umap'
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  The magick package is required to crop "/home/hornik/tmp/CRAN_recheck/SCIntRuler.Rcheck/vign_test/SCIntRuler/vignettes/SCIntRuler_files/figure-html/UMAP -1.png" but not available.
  The magick package is required to crop "/home/hornik/tmp/CRAN_recheck/SCIntRuler.Rcheck/vign_test/SCIntRuler/vignettes/SCIntRuler_files/figure-html/UMAP2 -1.png" but not available.
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  Using method 'umap'
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  Using method 'umap'
  0%   10   20   30   40   50   60   70   80   90   100%
  [----|----|----|----|----|----|----|----|----|----|
  **************************************************|
  
  Quitting from SCIntRuler.Rmd:166-200 [integration]
  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  NULL
  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  
  Error: processing vignette 'SCIntRuler.Rmd' failed with diagnostics:
  `grobs` must be a single grob or a list of grobs, not a list.
  --- failed re-building ‘SCIntRuler.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘SCIntRuler.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted