* using log directory ‘/srv/hornik/tmp/CRAN/covtracer.Rcheck’ * using R Under development (unstable) (2024-06-25 r86831) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.5 (2) Debian flang-new version 18.1.5 (2) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘covtracer/DESCRIPTION’ ... OK * this is package ‘covtracer’ version ‘0.0.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/5s] NOTE Maintainer: ‘Doug Kelkhoff ’ New submission Possibly misspelled words in DESCRIPTION: covr (27:59) Unknown, possibly misspelled, fields in DESCRIPTION: ‘Remotes’ Found the following (possibly) invalid URLs: URL: https://codecov.io/gh/genentech/covtracer (moved to https://app.codecov.io/gh/genentech/covtracer) From: README.md Status: 301 Message: Moved Permanently URL: https://www.github.com/Genentech/covtracer (moved to https://github.com/Genentech/covtracer) From: README.md Status: 301 Message: Moved Permanently For content that is 'Moved Permanently', please change http to https, add trailing slashes, or replace the old by the new URL. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘covtracer’ can be installed ... [1s/1s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s/3s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [20s/20s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [13s/13s] ERROR Running ‘testthat.R’ [13s/13s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(covtracer) > > test_check("covtracer") ℹ Installing test packages • examplepkg (derived `examplepkg_cov`, `examplepkg_ns`) • list.obj (derived `list.obj_cov`, `list.obj_ns`) • no.evaluable.code (derived `no.evaluable.code_cov`, `no.evaluable.code_ns`) • no.exports (derived `no.exports_cov`, `no.exports_ns`) • reexport.srcref (derived `reexport.srcref_ns`) Error in `FUN()`: ! In path: "/srv/hornik/tmp/CRAN/covtracer.Rcheck/tests/testthat/setup_test_packages.R" Caused by error in `loadNamespace()`: ! there is no package called 'reexport.srcref' Backtrace: ▆ 1. ├─testthat::test_check("covtracer") 2. │ └─testthat::test_dir(...) 3. │ └─testthat:::test_files(...) 4. │ └─testthat:::test_files_serial(...) 5. │ └─testthat:::test_files_setup_state(...) 6. │ └─testthat::source_test_setup(".", env) 7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE) 8. │ └─base::lapply(...) 9. │ └─testthat (local) FUN(X[[i]], ...) 10. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap) 11. │ ├─base::withCallingHandlers(...) 12. │ └─base::eval(exprs, env) 13. │ └─base::eval(exprs, env) 14. │ ├─base::assign(paste0(pkg, "_ns"), getNamespace(pkg)) at tests/testthat/setup_test_packages.R:45:5 15. │ └─base::getNamespace(pkg) 16. │ ├─.Internal(getRegisteredNamespace(name)) %||% ... 17. │ └─base::loadNamespace(name) 18. │ ├─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) 19. │ │ └─base (local) withOneRestart(expr, restarts[[1L]]) 20. │ │ └─base (local) doWithOneRestart(return(expr), restart) 21. │ └─base::stop(cond) 22. └─testthat (local) ``(``) 23. └─rlang::abort(...) Warning message: In install.packages(as.character(pkg_dirs), type = "source", lib = lib, : installation of package '/srv/hornik/tmp/CRAN/covtracer.Rcheck/tests/testthat/packages/reexport.srcref' had non-zero exit status Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [21s/21s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 NOTE