downloading reverse dependencies ... downloading brulee_0.3.0.tar.gz ... ok downloading cito_1.1.tar.gz ... ok downloading crumble_0.1.0.tar.gz ... ok downloading geodl_0.2.0.tar.gz ... ok downloading luz_0.4.0.tar.gz ... ok downloading scDHA_1.2.2.tar.gz ... ok downloading selenider_0.4.0.tar.gz ... ok downloading tabnet_0.6.0.tar.gz ... ok downloading torch_0.13.0.tar.gz ... ok downloading familiar_1.5.0.tar.gz ... ok downloading openalexR_1.4.0.tar.gz ... ok downloading plumber_1.2.2.tar.gz ... ok downloading torchdatasets_0.3.1.tar.gz ... ok downloading torchvision_0.6.0.tar.gz ... ok installing dependencies ‘coro’, ‘harmonicmeanp’, ‘isotree’, ‘katex’, ‘laGP’, ‘lmtp’, ‘luz’, ‘mlr3superlearner’, ‘mma’, ‘MultiscaleDTM’, ‘origami’, ‘parabar’, ‘pins’, ‘power.transform’, ‘praznik’, ‘rapidoc’, ‘redoc’, ‘rstream’, ‘S7’, ‘selenium’, ‘tfevents’, ‘torchvision’, ‘visdat’ also installing the dependencies ‘schoolmath’, ‘FMStable’ begin installing package ‘schoolmath’ begin installing package ‘parabar’ begin installing package ‘FMStable’ begin installing package ‘coro’ begin installing package ‘origami’ begin installing package ‘S7’ begin installing package ‘mlr3superlearner’ begin installing package ‘MultiscaleDTM’ begin installing package ‘tfevents’ begin installing package ‘mma’ begin installing package ‘selenium’ begin installing package ‘visdat’ begin installing package ‘katex’ begin installing package ‘rstream’ begin installing package ‘isotree’ begin installing package ‘power.transform’ begin installing package ‘laGP’ begin installing package ‘praznik’ begin installing package ‘redoc’ begin installing package ‘pins’ begin installing package ‘rapidoc’ * installing *source* package ‘rapidoc’ ... ** package ‘rapidoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rapidoc) * installing *source* package ‘redoc’ ... ** package ‘redoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (redoc) * installing *source* package ‘schoolmath’ ... ** package ‘schoolmath’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (schoolmath) * installing *source* package ‘visdat’ ... ** package ‘visdat’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (visdat) * installing *source* package ‘katex’ ... ** package ‘katex’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (katex) * installing *source* package ‘origami’ ... ** package ‘origami’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (origami) begin installing package ‘lmtp’ * installing *source* package ‘FMStable’ ... ** package ‘FMStable’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpqTlSUQ/R.INSTALL3bda3a229c66ea/FMStable/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c FMStable.c -o FMStable.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o FMStable.so FMStable.o init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpqTlSUQ/R.INSTALL3bda3a229c66ea/FMStable/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-FMStable/00new/FMStable/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (FMStable) begin installing package ‘harmonicmeanp’ * installing *source* package ‘coro’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (coro) begin installing package ‘torchvision’ begin installing package ‘luz’ * installing *source* package ‘S7’ ... ** package ‘S7’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKo08aX/R.INSTALL3bda6722fdfe1e/S7/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c method-dispatch.c -o method-dispatch.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o S7.so init.o method-dispatch.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKo08aX/R.INSTALL3bda6722fdfe1e/S7/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-S7/00new/S7/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (S7) * installing *source* package ‘rstream’ ... ** package ‘rstream’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpTdgySj/R.INSTALL3bda6f794811d1/rstream/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_RNG.c -o R_RNG.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c R_RngStreams.c -o R_RngStreams.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RngStreams.c -o RngStreams.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o rstream.so R_RNG.o R_RngStreams.o RngStreams.o init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpTdgySj/R.INSTALL3bda6f794811d1/rstream/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-rstream/00new/rstream/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rstream) * installing *source* package ‘selenium’ ... ** package ‘selenium’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (selenium) * installing *source* package ‘harmonicmeanp’ ... ** package ‘harmonicmeanp’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (harmonicmeanp) * installing *source* package ‘lmtp’ ... ** package ‘lmtp’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lmtp) * installing *source* package ‘power.transform’ ... ** package ‘power.transform’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (power.transform) * installing *source* package ‘praznik’ ... ** package ‘praznik’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpSAQanZ/R.INSTALL3bda7675ebf423/praznik/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c praznik.c -o praznik.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o praznik.so praznik.o -fopenmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpSAQanZ/R.INSTALL3bda7675ebf423/praznik/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-praznik/00new/praznik/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (praznik) * installing *source* package ‘mlr3superlearner’ ... ** package ‘mlr3superlearner’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mlr3superlearner) * installing *source* package ‘pins’ ... ** package ‘pins’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pins) * installing *source* package ‘torchvision’ ... ** package ‘torchvision’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (torchvision) * installing *source* package ‘parabar’ ... ** package ‘parabar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (parabar) * installing *source* package ‘laGP’ ... ** package ‘laGP’ successfully unpacked and MD5 sums checked ** using staged installation ** libs make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpioo1oZ/R.INSTALL3bda707180efc3/laGP/src' /home/hornik/tmp/R-d-gcc-14/bin/R CMD SHLIB -o laGP.so *.c using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[2]: Entering directory '/home/hornik/tmp/scratch/Rtmpioo1oZ/R.INSTALL3bda707180efc3/laGP/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c covar.c -o covar.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c covar_sep.c -o covar_sep.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c davies.c -o davies.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gamma.c -o gamma.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gp.c -o gp.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gp_sep.c -o gp_sep.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ieci.c -o ieci.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c laGP.c -o laGP.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c laGP_sep.c -o laGP_sep.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c linalg.c -o linalg.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matrix.c -o matrix.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c order.c -o order.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rbetter.c -o rbetter.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rhelp.c -o rhelp.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c util.c -o util.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o laGP.so covar.o covar_sep.o davies.o gamma.o gp.o gp_sep.o ieci.o init.o laGP.o laGP_sep.o linalg.o matrix.o order.o rbetter.o rhelp.o util.o -llapack -L/home/hornik/tmp/R-d-gcc-14/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[2]: Leaving directory '/home/hornik/tmp/scratch/Rtmpioo1oZ/R.INSTALL3bda707180efc3/laGP/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpioo1oZ/R.INSTALL3bda707180efc3/laGP/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-laGP/00new/laGP/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (laGP) * installing *source* package ‘luz’ ... ** package ‘luz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (luz) * installing *source* package ‘mma’ ... ** package ‘mma’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mma) * installing *source* package ‘MultiscaleDTM’ ... ** package ‘MultiscaleDTM’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpXprb5b/R.INSTALL3bda4d6720c527/MultiscaleDTM/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp_code.cpp -o cpp_code.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o MultiscaleDTM.so RcppExports.o cpp_code.o -fopenmp -llapack -L/home/hornik/tmp/R-d-gcc-14/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpXprb5b/R.INSTALL3bda4d6720c527/MultiscaleDTM/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-MultiscaleDTM/00new/MultiscaleDTM/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MultiscaleDTM) * installing *source* package ‘tfevents’ ... ** package ‘tfevents’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS= Using PKG_LIBS=-lprotobuf Using C++17 compiler: g++-14 -std=gnu++17 Using libprotoc 3.21.12 from /usr/bin/protoc ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpf8mVKX/R.INSTALL3bda5a9d42071/tfevents/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o In file included from tfevents_types.h:4, from RcppExports.cpp:4: tensor.h: In function ‘T Rcpp::as(SEXP) [with T = std::vector >; SEXP = SEXPREC*]’: tensor.h:13:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 13 | for (size_t i = 0; i < r_dtype.size(); i++) { | ~~^~~~~~~~~~~~~~~~ tensor.h: In function ‘T Rcpp::as(SEXP) [with T = std::vector; SEXP = SEXPREC*]’: tensor.h:47:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 47 | for (size_t i = 0; i < r_dims.size(); i++) { | ~~^~~~~~~~~~~~~~~ tensor.h: In function ‘T Rcpp::as(SEXP) [with T = std::vector >; SEXP = SEXPREC*]’: tensor.h:69:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 69 | for (size_t i = 0; i < r_dims.size(); i++) { | ~~^~~~~~~~~~~~~~~ In file included from tfevents_types.h:5: as.h: In function ‘T Rcpp::as(SEXP) [with T = std::vector; SEXP = SEXPREC*]’: as.h:40:23: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 40 | for (size_t i =0; i < r_buffer.size(); i++) { | ~~^~~~~~~~~~~~~~~~~ as.h: In function ‘T Rcpp::as(SEXP) [with T = std::vector; SEXP = SEXPREC*]’: as.h:102:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘R_xlen_t’ {aka ‘long int’} [-Wsign-compare] 102 | for (size_t i = 0; i < r_summary.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from tfevents_types.h:6: wrap.h: In function ‘SEXPREC* Rcpp::wrap(const T&) [with T = tensorboard::Summary; SEXP = SEXPREC*]’: wrap.h:105:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 105 | for (size_t i = 0; i < n_values; i++) { | ~~^~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c code.cpp -o code.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c event_writer.cpp -o event_writer.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c reader.cpp -o reader.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c record_writer.cpp -o record_writer.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c write.cpp -o write.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/summary.pb.cc -o generated/summary.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/tensor_shape.pb.cc -o generated/tensor_shape.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/resource_handle.pb.cc -o generated/resource_handle.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/tensor.pb.cc -o generated/tensor.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/plugins/scalar/plugin_data.pb.cc -o generated/plugins/scalar/plugin_data.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/plugins/hparams/api.pb.cc -o generated/plugins/hparams/api.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/plugins/hparams/plugin_data.pb.cc -o generated/plugins/hparams/plugin_data.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/plugins/hparams/hparams_util.pb.cc -o generated/plugins/hparams/hparams_util.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/plugins/image/plugin_data.pb.cc -o generated/plugins/image/plugin_data.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/plugins/histogram/plugin_data.pb.cc -o generated/plugins/histogram/plugin_data.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/plugins/text/plugin_data.pb.cc -o generated/plugins/text/plugin_data.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/plugins/audio/plugin_data.pb.cc -o generated/plugins/audio/plugin_data.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/event.pb.cc -o generated/event.pb.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c generated/types.pb.cc -o generated/types.pb.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DUSENEWAPI -Igenerated -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c crc32c.c -o crc32c.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o tfevents.so RcppExports.o code.o event_writer.o reader.o record_writer.o utils.o write.o generated/summary.pb.o generated/tensor_shape.pb.o generated/resource_handle.pb.o generated/tensor.pb.o generated/plugins/scalar/plugin_data.pb.o generated/plugins/hparams/api.pb.o generated/plugins/hparams/plugin_data.pb.o generated/plugins/hparams/hparams_util.pb.o generated/plugins/image/plugin_data.pb.o generated/plugins/histogram/plugin_data.pb.o generated/plugins/text/plugin_data.pb.o generated/plugins/audio/plugin_data.pb.o generated/event.pb.o generated/types.pb.o ./crc32c.o -lprotobuf -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpf8mVKX/R.INSTALL3bda5a9d42071/tfevents/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-tfevents/00new/tfevents/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tfevents) * installing *source* package ‘isotree’ ... ** package ‘isotree’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++-14 -std=gnu++17 accepts -g... yes checking for g++-14 -std=gnu++17 option to enable C++11 features... none needed configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmprwvYUc/R.INSTALL3bda6c3dc37fe8/isotree/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -D_USE_XOSHIRO -D_USE_ROBIN_MAP -DSUPPORTS_RESTRICT=1 -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -D_USE_XOSHIRO -D_USE_ROBIN_MAP -DSUPPORTS_RESTRICT=1 -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c Rwrapper.cpp -o Rwrapper.o In file included from headers_joined.h:73, from Rwrapper.cpp:76: In function ‘double extract_spR(const PredictionData&, const sparse_ix*, const sparse_ix*, std::size_t, std::size_t, std::size_t) [with PredictionData = PredictionData; sparse_ix = int]’, inlined from ‘void traverse_hplane(std::vector&, ExtIsoForest&, PredictionData&, double&, std::vector*, ImputedData*, sparse_ix*, double*, std::size_t) [with PredictionData = PredictionData; sparse_ix = int; ImputedData = ImputedData]’ at predict.h:1156:51: predict.h:1920:38: warning: ‘lb’ may be used uninitialized [-Wmaybe-uninitialized] 1920 | if (row_end == row_st || col_num < lb || col_num > ub) | ~~~~~~~~^~~~ predict.h: In function ‘void traverse_hplane(std::vector&, ExtIsoForest&, PredictionData&, double&, std::vector*, ImputedData*, sparse_ix*, double*, std::size_t) [with PredictionData = PredictionData; sparse_ix = int; ImputedData = ImputedData]’: predict.h:1104:12: note: ‘lb’ was declared here 1104 | size_t lb, ub; | ^~ In function ‘double extract_spR(const PredictionData&, const sparse_ix*, const sparse_ix*, std::size_t, std::size_t, std::size_t) [with PredictionData = PredictionData; sparse_ix = int]’, inlined from ‘void traverse_hplane(std::vector&, ExtIsoForest&, PredictionData&, double&, std::vector*, ImputedData*, sparse_ix*, double*, std::size_t) [with PredictionData = PredictionData; sparse_ix = int; ImputedData = ImputedData]’ at predict.h:1156:51: predict.h:1920:43: warning: ‘ub’ may be used uninitialized [-Wmaybe-uninitialized] 1920 | if (row_end == row_st || col_num < lb || col_num > ub) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ predict.h: In function ‘void traverse_hplane(std::vector&, ExtIsoForest&, PredictionData&, double&, std::vector*, ImputedData*, sparse_ix*, double*, std::size_t) [with PredictionData = PredictionData; sparse_ix = int; ImputedData = ImputedData]’: predict.h:1104:16: note: ‘ub’ was declared here 1104 | size_t lb, ub; | ^~ In function ‘double extract_spR(const PredictionData&, const sparse_ix*, const sparse_ix*, std::size_t, std::size_t, std::size_t) [with PredictionData = PredictionData; sparse_ix = int]’, inlined from ‘void traverse_hplane(std::vector&, ExtIsoForest&, PredictionData&, double&, std::vector*, ImputedData*, sparse_ix*, double*, std::size_t) [with PredictionData = PredictionData; sparse_ix = int; ImputedData = ImputedData]’ at predict.h:1156:51, inlined from ‘_Z30impute_missing_values_internalIdieEvPT_PibS1_PT0_S4_miP9IsoForestP12ExtIsoForestR7Imputer._omp_fn.1’ at impute.h:263:36: predict.h:1920:38: warning: ‘lb’ may be used uninitialized [-Wmaybe-uninitialized] 1920 | if (row_end == row_st || col_num < lb || col_num > ub) | ~~~~~~~~^~~~ predict.h: In function ‘_Z30impute_missing_values_internalIdieEvPT_PibS1_PT0_S4_miP9IsoForestP12ExtIsoForestR7Imputer._omp_fn.1’: predict.h:1104:12: note: ‘lb’ was declared here 1104 | size_t lb, ub; | ^~ In function ‘double extract_spR(const PredictionData&, const sparse_ix*, const sparse_ix*, std::size_t, std::size_t, std::size_t) [with PredictionData = PredictionData; sparse_ix = int]’, inlined from ‘void traverse_hplane(std::vector&, ExtIsoForest&, PredictionData&, double&, std::vector*, ImputedData*, sparse_ix*, double*, std::size_t) [with PredictionData = PredictionData; sparse_ix = int; ImputedData = ImputedData]’ at predict.h:1156:51, inlined from ‘_Z30impute_missing_values_internalIdieEvPT_PibS1_PT0_S4_miP9IsoForestP12ExtIsoForestR7Imputer._omp_fn.1’ at impute.h:263:36: predict.h:1920:43: warning: ‘ub’ may be used uninitialized [-Wmaybe-uninitialized] 1920 | if (row_end == row_st || col_num < lb || col_num > ub) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ predict.h: In function ‘_Z30impute_missing_values_internalIdieEvPT_PibS1_PT0_S4_miP9IsoForestP12ExtIsoForestR7Imputer._omp_fn.1’: predict.h:1104:16: note: ‘ub’ was declared here 1104 | size_t lb, ub; | ^~ In file included from headers_joined.h:65: In function ‘double find_split_full_gain_weighted(real_t*, std::size_t, std::size_t, std::size_t*, std::size_t*, std::size_t, bool, double*, std::size_t, double*, std::size_t*, std::size_t*, double*, double*, std::size_t&, double&, bool, mapping&) [with real_t = double; mapping = double* __restrict__; ldouble_safe = double]’, inlined from ‘double eval_guided_crit_weighted(double*, std::size_t, GainCriterion, double, bool, double*, double&, double&, double&, double*, std::size_t*, std::size_t*, std::size_t*, std::size_t, bool, double*, std::size_t, double*, std::size_t*, std::size_t*) [with ldouble_safe = double]’ at crit.h:3166:85: crit.h:2323:68: warning: ‘ignored’ may be used uninitialized [-Wmaybe-uninitialized] 2323 | split_point = midpoint(x[ix_arr[split_ix]], x[ix_arr[split_ix+1]]); | ~~~~~~~~~~~~~~~~~^ crit.h: In function ‘double eval_guided_crit_weighted(double*, std::size_t, GainCriterion, double, bool, double*, double&, double&, double&, double*, std::size_t*, std::size_t*, std::size_t*, std::size_t, bool, double*, std::size_t, double*, std::size_t*, std::size_t*) [with ldouble_safe = double]’: crit.h:3165:16: note: ‘ignored’ was declared here 3165 | size_t ignored; | ^~~~~~~ In function ‘double find_split_full_gain_weighted(real_t*, std::size_t, std::size_t, std::size_t*, std::size_t*, std::size_t, bool, double*, std::size_t, double*, std::size_t*, std::size_t*, double*, double*, std::size_t&, double&, bool, mapping&) [with real_t = double; mapping = double* __restrict__; ldouble_safe = long double]’, inlined from ‘double eval_guided_crit_weighted(double*, std::size_t, GainCriterion, double, bool, double*, double&, double&, double&, double*, std::size_t*, std::size_t*, std::size_t*, std::size_t, bool, double*, std::size_t, double*, std::size_t*, std::size_t*) [with ldouble_safe = long double]’ at crit.h:3166:85: crit.h:2323:68: warning: ‘ignored’ may be used uninitialized [-Wmaybe-uninitialized] 2323 | split_point = midpoint(x[ix_arr[split_ix]], x[ix_arr[split_ix+1]]); | ~~~~~~~~~~~~~~~~~^ crit.h: In function ‘double eval_guided_crit_weighted(double*, std::size_t, GainCriterion, double, bool, double*, double&, double&, double&, double*, std::size_t*, std::size_t*, std::size_t*, std::size_t, bool, double*, std::size_t, double*, std::size_t*, std::size_t*) [with ldouble_safe = long double]’: crit.h:3165:16: note: ‘ignored’ was declared here 3165 | size_t ignored; | ^~~~~~~ In file included from Rwrapper.cpp:73: crit.h: In function ‘double eval_guided_crit(std::size_t*, std::size_t, std::size_t, int*, int, int*, std::size_t*, std::size_t*, double*, int&, signed char*, signed char*, GainCriterion, double, bool, MissingAction, CategSplit) [with ldouble_safe = double]’: isotree.h:222:45: warning: ‘best_combin’ may be used uninitialized [-Wmaybe-uninitialized] 222 | #define extract_bit(number, bit) (((number) >> (bit)) & 1) | ~~~~~~~~~~^~~~~~~~~ crit.h:3820:73: note: in expansion of macro ‘extract_bit’ 3820 | split_categ[buffer_pos[st_pos + pos]] = extract_bit(best_combin, pos); | ^~~~~~~~~~~ crit.h:3780:32: note: ‘best_combin’ was declared here 3780 | size_t best_combin; | ^~~~~~~~~~~ crit.h: In function ‘double eval_guided_crit_weighted(std::size_t*, std::size_t, std::size_t, int*, int, int*, std::size_t*, double*, int&, signed char*, signed char*, GainCriterion, double, bool, MissingAction, CategSplit, mapping&) [with mapping = std::vector; ldouble_safe = double]’: isotree.h:222:45: warning: ‘best_combin’ may be used uninitialized [-Wmaybe-uninitialized] 222 | #define extract_bit(number, bit) (((number) >> (bit)) & 1) | ~~~~~~~~~~^~~~~~~~~ crit.h:4168:73: note: in expansion of macro ‘extract_bit’ 4168 | split_categ[buffer_pos[st_pos + pos]] = extract_bit(best_combin, pos); | ^~~~~~~~~~~ crit.h:4124:32: note: ‘best_combin’ was declared here 4124 | size_t best_combin; | ^~~~~~~~~~~ crit.h: In function ‘double eval_guided_crit_weighted(std::size_t*, std::size_t, std::size_t, int*, int, int*, std::size_t*, double*, int&, signed char*, signed char*, GainCriterion, double, bool, MissingAction, CategSplit, mapping&) [with mapping = tsl::robin_map; ldouble_safe = double]’: isotree.h:222:45: warning: ‘best_combin’ may be used uninitialized [-Wmaybe-uninitialized] 222 | #define extract_bit(number, bit) (((number) >> (bit)) & 1) | ~~~~~~~~~~^~~~~~~~~ crit.h:4168:73: note: in expansion of macro ‘extract_bit’ 4168 | split_categ[buffer_pos[st_pos + pos]] = extract_bit(best_combin, pos); | ^~~~~~~~~~~ crit.h:4124:32: note: ‘best_combin’ was declared here 4124 | size_t best_combin; | ^~~~~~~~~~~ crit.h: In function ‘double eval_guided_crit(std::size_t*, std::size_t, std::size_t, int*, int, int*, std::size_t*, std::size_t*, double*, int&, signed char*, signed char*, GainCriterion, double, bool, MissingAction, CategSplit) [with ldouble_safe = long double]’: isotree.h:222:45: warning: ‘best_combin’ may be used uninitialized [-Wmaybe-uninitialized] 222 | #define extract_bit(number, bit) (((number) >> (bit)) & 1) | ~~~~~~~~~~^~~~~~~~~ crit.h:3820:73: note: in expansion of macro ‘extract_bit’ 3820 | split_categ[buffer_pos[st_pos + pos]] = extract_bit(best_combin, pos); | ^~~~~~~~~~~ crit.h:3780:32: note: ‘best_combin’ was declared here 3780 | size_t best_combin; | ^~~~~~~~~~~ crit.h: In function ‘double eval_guided_crit_weighted(std::size_t*, std::size_t, std::size_t, int*, int, int*, std::size_t*, double*, int&, signed char*, signed char*, GainCriterion, double, bool, MissingAction, CategSplit, mapping&) [with mapping = std::vector; ldouble_safe = long double]’: isotree.h:222:45: warning: ‘best_combin’ may be used uninitialized [-Wmaybe-uninitialized] 222 | #define extract_bit(number, bit) (((number) >> (bit)) & 1) | ~~~~~~~~~~^~~~~~~~~ crit.h:4168:73: note: in expansion of macro ‘extract_bit’ 4168 | split_categ[buffer_pos[st_pos + pos]] = extract_bit(best_combin, pos); | ^~~~~~~~~~~ crit.h:4124:32: note: ‘best_combin’ was declared here 4124 | size_t best_combin; | ^~~~~~~~~~~ crit.h: In function ‘double eval_guided_crit_weighted(std::size_t*, std::size_t, std::size_t, int*, int, int*, std::size_t*, double*, int&, signed char*, signed char*, GainCriterion, double, bool, MissingAction, CategSplit, mapping&) [with mapping = tsl::robin_map; ldouble_safe = long double]’: isotree.h:222:45: warning: ‘best_combin’ may be used uninitialized [-Wmaybe-uninitialized] 222 | #define extract_bit(number, bit) (((number) >> (bit)) & 1) | ~~~~~~~~~~^~~~~~~~~ crit.h:4168:73: note: in expansion of macro ‘extract_bit’ 4168 | split_categ[buffer_pos[st_pos + pos]] = extract_bit(best_combin, pos); | ^~~~~~~~~~~ crit.h:4124:32: note: ‘best_combin’ was declared here 4124 | size_t best_combin; | ^~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -D_USE_XOSHIRO -D_USE_ROBIN_MAP -DSUPPORTS_RESTRICT=1 -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c formatted_exporters.cpp -o formatted_exporters.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -D_USE_XOSHIRO -D_USE_ROBIN_MAP -DSUPPORTS_RESTRICT=1 -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c indexer.cpp -o indexer.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -D_USE_XOSHIRO -D_USE_ROBIN_MAP -DSUPPORTS_RESTRICT=1 -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c merge_models.cpp -o merge_models.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -D_USE_XOSHIRO -D_USE_ROBIN_MAP -DSUPPORTS_RESTRICT=1 -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c serialize.cpp -o serialize.o In function ‘void write_bytes(const void*, std::size_t, FILE*&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = _IO_FILE*]’ at serialize.cpp:3934:26: serialize.cpp:470:5: warning: ‘size_model1’ may be used uninitialized [-Wmaybe-uninitialized] 470 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = _IO_FILE*]’: serialize.cpp:3840:12: note: ‘size_model1’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, FILE*&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = _IO_FILE*]’ at serialize.cpp:3936:26: serialize.cpp:470:5: warning: ‘size_model2’ may be used uninitialized [-Wmaybe-uninitialized] 470 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = _IO_FILE*]’: serialize.cpp:3840:25: note: ‘size_model2’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, FILE*&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = _IO_FILE*]’ at serialize.cpp:3938:26: serialize.cpp:470:5: warning: ‘size_model3’ may be used uninitialized [-Wmaybe-uninitialized] 470 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = _IO_FILE*]’: serialize.cpp:3840:38: note: ‘size_model3’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, FILE*&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = _IO_FILE*]’ at serialize.cpp:3940:26: serialize.cpp:470:5: warning: ‘size_model4’ may be used uninitialized [-Wmaybe-uninitialized] 470 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = _IO_FILE*]’: serialize.cpp:3840:51: note: ‘size_model4’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, std::ostream&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = std::basic_ostream]’ at serialize.cpp:3934:26: serialize.cpp:462:5: warning: ‘size_model1’ may be used uninitialized [-Wmaybe-uninitialized] 462 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = std::basic_ostream]’: serialize.cpp:3840:12: note: ‘size_model1’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, std::ostream&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = std::basic_ostream]’ at serialize.cpp:3936:26: serialize.cpp:462:5: warning: ‘size_model2’ may be used uninitialized [-Wmaybe-uninitialized] 462 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = std::basic_ostream]’: serialize.cpp:3840:25: note: ‘size_model2’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, std::ostream&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = std::basic_ostream]’ at serialize.cpp:3938:26: serialize.cpp:462:5: warning: ‘size_model3’ may be used uninitialized [-Wmaybe-uninitialized] 462 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = std::basic_ostream]’: serialize.cpp:3840:38: note: ‘size_model3’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, std::ostream&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = std::basic_ostream]’ at serialize.cpp:3940:26: serialize.cpp:462:5: warning: ‘size_model4’ may be used uninitialized [-Wmaybe-uninitialized] 462 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = std::basic_ostream]’: serialize.cpp:3840:51: note: ‘size_model4’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, char*&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = char*]’ at serialize.cpp:3934:26: serialize.cpp:454:5: warning: ‘size_model1’ may be used uninitialized [-Wmaybe-uninitialized] 454 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = char*]’: serialize.cpp:3840:12: note: ‘size_model1’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, char*&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = char*]’ at serialize.cpp:3936:26: serialize.cpp:454:5: warning: ‘size_model2’ may be used uninitialized [-Wmaybe-uninitialized] 454 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = char*]’: serialize.cpp:3840:25: note: ‘size_model2’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, char*&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = char*]’ at serialize.cpp:3938:26: serialize.cpp:454:5: warning: ‘size_model3’ may be used uninitialized [-Wmaybe-uninitialized] 454 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = char*]’: serialize.cpp:3840:38: note: ‘size_model3’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ In function ‘void write_bytes(const void*, std::size_t, char*&) [with dtype = char]’, inlined from ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = char*]’ at serialize.cpp:3940:26: serialize.cpp:454:5: warning: ‘size_model4’ may be used uninitialized [-Wmaybe-uninitialized] 454 | if (n_els == 0) return; | ^~ serialize.cpp: In function ‘void serialize_combined(const char*, const char*, const char*, const char*, const char*, std::size_t, otype&) [with otype = char*]’: serialize.cpp:3840:51: note: ‘size_model4’ was declared here 3840 | size_t size_model1, size_model2, size_model3, size_model4; | ^~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -D_USE_XOSHIRO -D_USE_ROBIN_MAP -DSUPPORTS_RESTRICT=1 -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c sql.cpp -o sql.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DRCPP_USE_UNWIND_PROTECT -D_FOR_R -D_USE_XOSHIRO -D_USE_ROBIN_MAP -DSUPPORTS_RESTRICT=1 -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fno-math-errno -fno-trapping-math -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c subset_models.cpp -o subset_models.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o isotree.so RcppExports.o Rwrapper.o formatted_exporters.o indexer.o merge_models.o serialize.o sql.o subset_models.o -fopenmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmprwvYUc/R.INSTALL3bda6c3dc37fe8/isotree/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-isotree/00new/isotree/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (isotree) checking coro_1.1.0.tar.gz ... checking brulee_0.3.0.tar.gz ... checking cito_1.1.tar.gz ... checking crumble_0.1.0.tar.gz ... checking geodl_0.2.0.tar.gz ... checking luz_0.4.0.tar.gz ... checking scDHA_1.2.2.tar.gz ... checking selenider_0.4.0.tar.gz ... checking tabnet_0.6.0.tar.gz ... checking torch_0.13.0.tar.gz ... checking familiar_1.5.0.tar.gz ... checking openalexR_1.4.0.tar.gz ... checking plumber_1.2.2.tar.gz ... checking torchdatasets_0.3.1.tar.gz ... checking torchvision_0.6.0.tar.gz ... Depends: Package: coro Depends: R (>= 3.5.0) Imports: rlang (>= 0.4.12) Timings: user system elapsed coro 36.734 3.889 41.415 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 2 12 Check results summary: coro ... OK rdepends_brulee ... OK rdepends_cito ... OK rdepends_crumble ... OK rdepends_familiar ... OK rdepends_geodl ... OK rdepends_luz ... NOTE * checking Rd cross-references ... NOTE rdepends_openalexR ... OK rdepends_plumber ... OK rdepends_scDHA ... OK rdepends_selenider ... OK rdepends_tabnet ... OK rdepends_torch ... NOTE * checking Rd cross-references ... NOTE * checking compiled code ... NOTE rdepends_torchdatasets ... OK rdepends_torchvision ... OK