* using log directory ‘/srv/hornik/tmp/CRAN_pretest/confidenceCurves.Rcheck’ * using R Under development (unstable) (2025-07-31 r88477) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (3) Debian flang-new version 19.1.7 (3) * running under: Debian GNU/Linux 13 (trixie) * using session charset: UTF-8 * checking for file ‘confidenceCurves/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘confidenceCurves’ version ‘0.1.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/3s] NOTE Maintainer: ‘Freda Werdiger ’ New submission * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... 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[26s/26s] ERROR Running examples in ‘confidenceCurves-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: testConfidenceCurves > ### Title: Test confidence curves > ### Aliases: testConfidenceCurves > > ### ** Examples > > # to use default settings and generate 18 row DataFrame > testConfidenceCurves() min.meaningful.effect mean s.error conf.benefit 1 -0.05 -0.8338 0.4148 0.9777988 2 -0.05 -0.6554 0.4086 0.9456570 3 -0.05 -0.4855 0.4043 0.8850951 4 -0.05 -0.9949 0.4160 0.9916101 5 -0.05 -0.8165 0.4098 0.9768294 6 -0.05 -0.6466 0.4056 0.9445648 7 -0.05 -1.1592 0.4186 0.9971900 8 -0.05 -0.9808 0.4125 0.9912940 9 -0.05 -0.8109 0.4082 0.9765036 10 -0.10 -0.8338 0.4148 0.9777988 11 -0.10 -0.6554 0.4086 0.9456570 12 -0.10 -0.4855 0.4043 0.8850951 13 -0.10 -0.9949 0.4160 0.9916101 14 -0.10 -0.8165 0.4098 0.9768294 15 -0.10 -0.6466 0.4056 0.9445648 16 -0.10 -1.1592 0.4186 0.9971900 17 -0.10 -0.9808 0.4125 0.9912940 18 -0.10 -0.8109 0.4082 0.9765036 conf.lack.meaningful.benefit conf.meaningful.benefit conf.equivalent p.value 1 0.029397371 0.9706026 0.012845320 0.0220 2 0.069203274 0.9307967 0.027074883 0.0540 3 0.140699995 0.8593000 0.048034541 0.1100 4 0.011563981 0.9884360 0.005556112 0.0084 5 0.030722819 0.9692772 0.013476654 0.0230 6 0.070643478 0.9293565 0.027705995 0.0550 7 0.004027825 0.9959722 0.002093062 0.0028 8 0.012014323 0.9879857 0.005788997 0.0087 9 0.031168523 0.9688315 0.013689315 0.0230 10 0.038432058 0.9615679 0.026250848 0.0220 11 0.087013961 0.9129860 0.054776422 0.0540 12 0.170165786 0.8298342 0.096383528 0.1100 13 0.015732952 0.9842670 0.011487079 0.0084 14 0.040207932 0.9597921 0.027540738 0.0230 15 0.088871368 0.9111286 0.056049465 0.0550 16 0.005698428 0.9943016 0.004383761 0.0028 17 0.016362030 0.9836380 0.011969740 0.0087 18 0.040805319 0.9591947 0.027975158 0.0230 p.value.test ninetyfive.percent.CI.lower ninetyfive.percent.CI.upper 1 one-sided -1.6 -0.023 2 one-sided -1.4 0.140 3 one-sided -1.3 0.300 4 one-sided -1.8 -0.190 5 one-sided -1.6 -0.016 6 one-sided -1.4 0.140 7 one-sided -2.0 -0.340 8 one-sided -1.8 -0.180 9 one-sided -1.6 -0.014 10 one-sided -1.6 -0.023 11 one-sided -1.4 0.140 12 one-sided -1.3 0.300 13 one-sided -1.8 -0.190 14 one-sided -1.6 -0.016 15 one-sided -1.4 0.140 16 one-sided -2.0 -0.340 17 one-sided -1.8 -0.180 18 one-sided -1.6 -0.014 > # to fix lmb > testConfidenceCurves(vary.lmb = -0.05) min.meaningful.effect mean s.error conf.benefit 1 -0.05 -0.8338 0.4148 0.9777988 2 -0.05 -0.6554 0.4086 0.9456570 3 -0.05 -0.4855 0.4043 0.8850951 4 -0.05 -0.9949 0.4160 0.9916101 5 -0.05 -0.8165 0.4098 0.9768294 6 -0.05 -0.6466 0.4056 0.9445648 7 -0.05 -1.1592 0.4186 0.9971900 8 -0.05 -0.9808 0.4125 0.9912940 9 -0.05 -0.8109 0.4082 0.9765036 conf.lack.meaningful.benefit conf.meaningful.benefit conf.equivalent p.value 1 0.029397371 0.9706026 0.012845320 0.0220 2 0.069203274 0.9307967 0.027074883 0.0540 3 0.140699995 0.8593000 0.048034541 0.1100 4 0.011563981 0.9884360 0.005556112 0.0084 5 0.030722819 0.9692772 0.013476654 0.0230 6 0.070643478 0.9293565 0.027705995 0.0550 7 0.004027825 0.9959722 0.002093062 0.0028 8 0.012014323 0.9879857 0.005788997 0.0087 9 0.031168523 0.9688315 0.013689315 0.0230 p.value.test ninetyfive.percent.CI.lower ninetyfive.percent.CI.upper 1 one-sided -1.6 -0.023 2 one-sided -1.4 0.140 3 one-sided -1.3 0.300 4 one-sided -1.8 -0.190 5 one-sided -1.6 -0.016 6 one-sided -1.4 0.140 7 one-sided -2.0 -0.340 8 one-sided -1.8 -0.180 9 one-sided -1.6 -0.014 > # to run without showing plots > testConfidenceCurves(return.plot=F) Error in confidenceCurves::makeConfidenceCurves(num.resp.ctrl = k, num.resp.trmt = j, : F used instead of FALSE Calls: testConfidenceCurves -> Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [3s/3s] OK Running ‘testthat.R’ [2s/2s] * checking PDF version of manual ... [2s/2s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 NOTE