context("psmat and psacf") if(!is.null(attributes(identical(FALSE, TRUE)))) stop("OECD label issue") # rm(list = ls()) options(warn = -1) test_that("psmat works as intended", { expect_identical(psmat(wlddev$PCGDP, wlddev$iso3c, wlddev$year), psmat(wlddev, PCGDP ~ iso3c, ~ year)) expect_identical(psmat(wlddev$PCGDP, wlddev$iso3c, wlddev$year), psmat(wlddev[9], wlddev$iso3c, wlddev$year)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c, wlddev$year), psmat(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, ~ year)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c, wlddev$year), psmat(wlddev, ~ iso3c, ~ year, cols = 9:12)) # without year expect_identical(psmat(wlddev$PCGDP, wlddev$iso3c), psmat(wlddev, PCGDP ~ iso3c)) expect_identical(psmat(wlddev$PCGDP, wlddev$iso3c), psmat(wlddev[9], wlddev$iso3c)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c), psmat(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c), psmat(wlddev, ~ iso3c, cols = 9:12)) # only nid's expect_identical(psmat(wlddev$PCGDP, 216), psmat(wlddev[9], 216)) expect_identical(psmat(wlddev[9:12], 216), psmat(wlddev, 216, cols = 9:12)) # TRANSPOSE expect_identical(psmat(wlddev$PCGDP, wlddev$iso3c, wlddev$year, transpose = TRUE), `attr<-`(t(psmat(wlddev$PCGDP, wlddev$iso3c, wlddev$year)), "transpose", TRUE)) expect_identical(psmat(wlddev$PCGDP, wlddev$iso3c, wlddev$year, transpose = TRUE), psmat(wlddev, PCGDP ~ iso3c, ~ year, transpose = TRUE)) expect_identical(psmat(wlddev$PCGDP, wlddev$iso3c, wlddev$year, transpose = TRUE), psmat(wlddev[9], wlddev$iso3c, wlddev$year, transpose = TRUE)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c, wlddev$year, transpose = TRUE), psmat(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, ~ year, transpose = TRUE)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c, wlddev$year, transpose = TRUE), psmat(wlddev, ~ iso3c, ~ year, cols = 9:12, transpose = TRUE)) # without year expect_identical(psmat(wlddev$PCGDP, wlddev$iso3c, transpose = TRUE), psmat(wlddev, PCGDP ~ iso3c, transpose = TRUE)) expect_identical(psmat(wlddev$PCGDP, wlddev$iso3c, transpose = TRUE), psmat(wlddev[9], wlddev$iso3c, transpose = TRUE)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c, transpose = TRUE), psmat(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, transpose = TRUE)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c, transpose = TRUE), psmat(wlddev, ~ iso3c, cols = 9:12, transpose = TRUE)) # only nid's expect_identical(psmat(wlddev$PCGDP, 216, transpose = TRUE), psmat(wlddev[9], 216, transpose = TRUE)) expect_identical(psmat(wlddev[9:12], 216, transpose = TRUE), psmat(wlddev, 216, cols = 9:12, transpose = TRUE)) # LIST-OUTPUT expect_true(is.array(psmat(wlddev[9:12], wlddev$iso3c, wlddev$year))) expect_true(is.list(psmat(wlddev[9:12], wlddev$iso3c, wlddev$year, array = FALSE))) expect_identical(psmat(wlddev[9:12], wlddev$iso3c, wlddev$year, array = FALSE), psmat(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, ~ year, array = FALSE)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c, wlddev$year, array = FALSE), psmat(wlddev, ~ iso3c, ~ year, cols = 9:12, array = FALSE)) # without year expect_identical(psmat(wlddev[9:12], wlddev$iso3c, array = FALSE), psmat(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, array = FALSE)) expect_identical(psmat(wlddev[9:12], wlddev$iso3c, array = FALSE), psmat(wlddev, ~ iso3c, cols = 9:12, array = FALSE)) # only nid's expect_identical(psmat(wlddev[9:12], 216, array = FALSE), psmat(wlddev, 216, cols = 9:12, array = FALSE)) }) test_that("psacf works as intended", { x <- na_rm(wlddev$PCGDP) expect_equal(unclass(psacf(x, rep(1,length(x)), seq_along(x), lag.max = 12, plot = FALSE))[1:4], unclass(acf(x, lag.max = 12, plot = FALSE))[1:4], tolerance = 1e-3) expect_equal(unclass(psacf(x, rep(1,length(x)), seq_along(x), type = "covariance", lag.max = 12, gscale = FALSE, plot = FALSE))[1:4], unclass(acf(x, type = "covariance", lag.max = 12, plot = FALSE))[1:4], tolerance = 1e-3) expect_equal(unclass(pspacf(x, rep(1,length(x)), seq_along(x), lag.max = 12, plot = FALSE))[1:4], unclass(pacf(x, lag.max = 12, plot = FALSE))[1:4], tolerance = 1e-3) dat <- na_omit(get_vars(wlddev, c(9:10,12))) expect_equal(unclass(psacf(dat, rep(1,nrow(dat)), seq_row(dat), lag.max = 12, plot = FALSE))[1:4], unclass(acf(dat, lag.max = 12, plot = FALSE))[1:4], tolerance = 1e-2) expect_equal(unclass(psacf(dat, rep(1,nrow(dat)), seq_row(dat), type = "covariance", lag.max = 12, gscale = FALSE, plot = FALSE))[1:4], unclass(acf(dat, type = "covariance", lag.max = 12, plot = FALSE))[1:4], tolerance = 1e-2) # expect_equal(unclass(pspacf(dat, rep(1,nrow(dat)), seq_row(dat), lag.max = 12, plot = FALSE))[1:4], unclass(pacf(dat, lag.max = 12, plot = FALSE))[1:4], tolerance = 1e-2) # This is strange !!!! expect_equal(unclass(psacf(wlddev$PCGDP, wlddev$iso3c, wlddev$year, plot = FALSE))[1:4], unclass(psacf(wlddev, PCGDP ~ iso3c, ~ year, plot = FALSE))[1:4]) expect_equal(unclass(psacf(wlddev$PCGDP, wlddev$iso3c, wlddev$year, plot = FALSE))[1:4], unclass(psacf(wlddev[9], wlddev$iso3c, wlddev$year, plot = FALSE))[1:4]) expect_equal(unclass(psacf(wlddev[9:12], wlddev$iso3c, wlddev$year, plot = FALSE))[1:4], unclass(psacf(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, ~ year, plot = FALSE))[1:4]) expect_equal(unclass(psacf(wlddev[9:12], wlddev$iso3c, wlddev$year, plot = FALSE))[1:4], unclass(psacf(wlddev, ~ iso3c, ~ year, cols = 9:12, plot = FALSE))[1:4]) # equality expect_equal(unclass(psacf(wlddev$PCGDP, wlddev$iso3c, plot = FALSE))[1:4], unclass(psacf(wlddev$PCGDP, wlddev$iso3c, wlddev$year, plot = FALSE))[1:4]) # without year expect_equal(unclass(psacf(wlddev$PCGDP, wlddev$iso3c, plot = FALSE))[1:4], unclass(psacf(wlddev, PCGDP ~ iso3c, plot = FALSE))[1:4]) expect_equal(unclass(psacf(wlddev$PCGDP, wlddev$iso3c, plot = FALSE))[1:4], unclass(psacf(wlddev[9], wlddev$iso3c, plot = FALSE))[1:4]) expect_equal(unclass(psacf(wlddev[9:12], wlddev$iso3c, plot = FALSE))[1:4], unclass(psacf(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, plot = FALSE))[1:4]) expect_equal(unclass(psacf(wlddev[9:12], wlddev$iso3c, plot = FALSE))[1:4], unclass(psacf(wlddev, ~ iso3c, cols = 9:12, plot = FALSE))[1:4]) }) test_that("pspacf works as intended", { expect_equal(unclass(pspacf(wlddev$PCGDP, wlddev$iso3c, wlddev$year, plot = FALSE))[1:4], unclass(pspacf(wlddev, PCGDP ~ iso3c, ~ year, plot = FALSE))[1:4]) expect_equal(unclass(pspacf(wlddev$PCGDP, wlddev$iso3c, wlddev$year, plot = FALSE))[1:4], unclass(pspacf(wlddev[9], wlddev$iso3c, wlddev$year, plot = FALSE))[1:4]) expect_equal(unclass(pspacf(wlddev[9:12], wlddev$iso3c, wlddev$year, plot = FALSE))[1:4], unclass(pspacf(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, ~ year, plot = FALSE))[1:4]) expect_equal(unclass(pspacf(wlddev[9:12], wlddev$iso3c, wlddev$year, plot = FALSE))[1:4], unclass(pspacf(wlddev, ~ iso3c, ~ year, cols = 9:12, plot = FALSE))[1:4]) # equality expect_equal(unclass(pspacf(wlddev$PCGDP, wlddev$iso3c, plot = FALSE))[1:4], unclass(pspacf(wlddev$PCGDP, wlddev$iso3c, wlddev$year, plot = FALSE))[1:4]) # without year expect_equal(unclass(pspacf(wlddev$PCGDP, wlddev$iso3c, plot = FALSE))[1:4], unclass(pspacf(wlddev, PCGDP ~ iso3c, plot = FALSE))[1:4]) expect_equal(unclass(pspacf(wlddev$PCGDP, wlddev$iso3c, plot = FALSE))[1:4], unclass(pspacf(wlddev[9], wlddev$iso3c, plot = FALSE))[1:4]) expect_equal(unclass(pspacf(wlddev[9:12], wlddev$iso3c, plot = FALSE))[1:4], unclass(pspacf(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, plot = FALSE))[1:4]) expect_equal(unclass(pspacf(wlddev[9:12], wlddev$iso3c, plot = FALSE))[1:4], unclass(pspacf(wlddev, ~ iso3c, cols = 9:12, plot = FALSE))[1:4]) }) test_that("psmat gives errors for wrong input", { # wrong lengths expect_error(psmat(wlddev$PCGDP, wlddev$iso3c[-1], wlddev$year)) expect_error(psmat(wlddev$PCGDP, wlddev$iso3c, wlddev$year[-1])) expect_error(psmat(wlddev[9:12], wlddev$iso3c[-1], wlddev$year)) expect_error(psmat(wlddev[9:12], wlddev$iso3c, wlddev$year[-1])) # without year expect_error(psmat(wlddev$PCGDP, wlddev$iso3c[-1])) expect_error(psmat(wlddev[9:12], wlddev$iso3c[-1])) # only nid's expect_error(psmat(wlddev$PCGDP, 218)) expect_error(psmat(wlddev[9:12], 218)) # wrong formula expect_error(psmat(wlddev, PCGDP2 ~ iso3c, ~ year)) expect_error(psmat(wlddev, PCGDP ~ iso3c2, ~ year)) expect_error(psmat(wlddev, PCGDP ~ iso3c, ~ year2)) expect_error(psmat(wlddev, PCGDP + LIFEEX + GINI + ODA + bla ~ iso3c, ~ year)) expect_error(psmat(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c + bla, ~ year)) expect_error(psmat(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, ~ year + bla)) # without year expect_error(psmat(wlddev, PCGDP2 ~ iso3c)) expect_error(psmat(wlddev, PCGDP ~ iso3c2)) expect_error(psmat(wlddev, PCGDP + LIFEEX + GINI + ODA + bla ~ iso3c, ~ year)) expect_error(psmat(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c + bla, ~ year)) # cols expect_error(psmat(wlddev, ~ iso3c, ~ year, cols = 14)) expect_error(psmat(wlddev, ~ iso3c, ~ year, cols = "bla")) expect_visible(psmat(wlddev, ~ iso3c, ~ year, cols = sapply(wlddev, is.numeric))) expect_error(psmat(wlddev, ~ iso3c, ~ year, cols = sapply(wlddev, is.numeric)[-1])) }) test_that("psacf gives errors for wrong input", { # wrong lengths expect_error(psacf(wlddev$PCGDP, wlddev$iso3c[-1], wlddev$year, plot = FALSE)) expect_error(psacf(wlddev$PCGDP, wlddev$iso3c, wlddev$year[-1], plot = FALSE)) expect_error(psacf(wlddev[9:12], wlddev$iso3c[-1], wlddev$year, plot = FALSE)) expect_error(psacf(wlddev[9:12], wlddev$iso3c, wlddev$year[-1], plot = FALSE)) # without year expect_error(psacf(wlddev$PCGDP, wlddev$iso3c[-1], plot = FALSE)) expect_error(psacf(wlddev[9:12], wlddev$iso3c[-1], plot = FALSE)) # this should give error... expect_error(psacf(wlddev$PCGDP, 218, plot = FALSE)) expect_error(psacf(wlddev[9:12], 218, plot = FALSE)) # wrong formula expect_error(psacf(wlddev, PCGDP2 ~ iso3c, ~ year, plot = FALSE)) expect_error(psacf(wlddev, PCGDP ~ iso3c2, ~ year, plot = FALSE)) expect_error(psacf(wlddev, PCGDP ~ iso3c, ~ year2, plot = FALSE)) expect_error(psacf(wlddev, PCGDP + LIFEEX + GINI + ODA + bla ~ iso3c, ~ year, plot = FALSE)) expect_error(psacf(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c + bla, ~ year, plot = FALSE)) expect_error(psacf(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c, ~ year + bla, plot = FALSE)) # without year expect_error(psacf(wlddev, PCGDP2 ~ iso3c, plot = FALSE)) expect_error(psacf(wlddev, PCGDP ~ iso3c2, plot = FALSE)) expect_error(psacf(wlddev, PCGDP + LIFEEX + GINI + ODA + bla ~ iso3c, ~ year, plot = FALSE)) expect_error(psacf(wlddev, PCGDP + LIFEEX + GINI + ODA ~ iso3c + bla, ~ year, plot = FALSE)) # cols expect_error(psacf(wlddev, ~ iso3c, ~ year, cols = 14, plot = FALSE)) expect_error(psacf(wlddev, ~ iso3c, ~ year, cols = "bla", plot = FALSE)) expect_visible(psacf(wlddev, ~ iso3c, ~ year, cols = sapply(wlddev, is.numeric), plot = FALSE)) expect_error(psacf(wlddev, ~ iso3c, ~ year, cols = sapply(wlddev, is.numeric)[-1], plot = FALSE)) }) options(warn = 1)