R Under development (unstable) (2024-03-03 r86036 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > if (require("testthat")) { + test_check("coala") + } else { + warning("testthat not available. Skipping unittests!") + } Loading required package: testthat Loading required package: coala Discard focal markers with Minor Allele Frequency equal to or below 0.05 . No marker discarded. Discard focal markers with Minor Allele Frequency equal to or below 0.05 . 31 markers discarded. 34 markers remaining. [ FAIL 0 | WARN 21 | SKIP 44 | PASS 854 ] ══ Skipped tests (44) ══════════════════════════════════════════════════════════ • Not on Travis-CI (4): 'test-travis-setup.R:6:3', 'test-travis-setup.R:12:3', 'test-travis-setup.R:18:3', 'test-travis-setup.R:24:3' • OmegaPlus not found (7): 'test-sumstat-omega.R:4:3', 'test-sumstat-omega.R:17:3', 'test-sumstat-omega.R:37:3', 'test-sumstat-omega.R:51:3', 'test-sumstat-omega.R:59:3', 'test-sumstat-omega.R:74:3', 'test-sumstat-omega.R:84:3' • On CRAN (1): 'test-tools.R:4:3' • On Windows (2): 'test-model-simulation.R:15:3', 'test-model-simulation.R:66:3' • PopGenome cannot be loaded (1): 'test-import-popgenome.R:4:3' • empty test (3): 'test-model-class.R:256:1', 'test-parameter-class.R:92:1', 'test-simulator-class.R:22:1' • msms not installed (7): 'test-feature-mutation.R:67:3', 'test-feature-selection.R:4:3', 'test-feature-selection.R:36:3', 'test-feature-selection.R:53:3', 'test-simulator-msms.R:4:3', 'test-simulator-msms.R:14:3', 'test-simulator-msms.R:28:3' • seq-gen not installed (4): 'test-simulator-seqgen.R:286:3', 'test-simulator-seqgen.R:306:3', 'test-simulator-seqgen.R:320:3', 'test-sumstat-dna.R:4:3' • seqgen not installed (15): 'test-feature-mutation.R:50:3', 'test-feature-mutation.R:81:3', 'test-simulator-seqgen.R:149:3', 'test-simulator-seqgen.R:163:3', 'test-simulator-seqgen.R:174:3', 'test-simulator-seqgen.R:188:3', 'test-simulator-seqgen.R:203:3', 'test-simulator-seqgen.R:210:3', 'test-simulator-seqgen.R:220:3', 'test-simulator-seqgen.R:230:3', 'test-simulator-seqgen.R:243:3', 'test-simulator-seqgen.R:261:3', 'test-simulator-seqgen.R:328:3', 'test-simulator-seqgen.R:338:3', 'test-simulator-seqgen.R:354:3' [ FAIL 0 | WARN 21 | SKIP 44 | PASS 854 ] > > proc.time() user system elapsed 9.04 0.95 10.06