downloading reverse dependencies ... downloading cmsaf_3.6.0.tar.gz ... ok downloading cmsafvis_1.3.0.tar.gz ... ok installing dependencies ‘cmsaf’, ‘cmsafops’, ‘cmsafvis’, ‘rainfarmr’, ‘rworldxtra’, ‘SearchTrees’, ‘xml2’ begin installing package ‘SearchTrees’ begin installing package ‘rainfarmr’ begin installing package ‘rworldxtra’ begin installing package ‘xml2’ * installing *source* package ‘rworldxtra’ ... ** this is package ‘rworldxtra’ version ‘1.01’ ** package ‘rworldxtra’ successfully unpacked and MD5 sums checked ** using staged installation ** data ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rworldxtra) * installing *source* package ‘rainfarmr’ ... ** this is package ‘rainfarmr’ version ‘0.1’ ** package ‘rainfarmr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rainfarmr) * installing *source* package ‘SearchTrees’ ... ** this is package ‘SearchTrees’ version ‘0.5.5’ ** package ‘SearchTrees’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpSJzzFR/R.INSTALL183e276c7d6068/SearchTrees/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c quadtree2.c -o quadtree2.o quadtree2.c: In function ‘R_Build_Quadtree_Rect’: quadtree2.c:66:25: warning: unused variable ‘ptr2’ [-Wunused-variable] 66 | SEXP klass, ans, ptr, ptr2; | ^~~~ quadtree2.c: In function ‘R_Build_Quadtree_Pt’: quadtree2.c:105:7: warning: unused variable ‘res’ [-Wunused-variable] 105 | int res; | ^~~ quadtree2.c: In function ‘Add_Rects_To_Bucket’: quadtree2.c:211:7: warning: unused variable ‘olddatsize’ [-Wunused-variable] 211 | int olddatsize; | ^~~~~~~~~~ quadtree2.c:210:12: warning: unused variable ‘olddat’ [-Wunused-variable] 210 | rect_t **olddat; | ^~~~~~ quadtree2.c: In function ‘R_Find_Neighbors_Pts’: quadtree2.c:356:7: warning: unused variable ‘inserted’ [-Wunused-variable] 356 | int inserted = 0; | ^~~~~~~~ quadtree2.c:350:7: warning: unused variable ‘filled’ [-Wunused-variable] 350 | int filled; | ^~~~~~ quadtree2.c: In function ‘Descend_To_Bucket’: quadtree2.c:421:10: warning: ‘ret’ may be used uninitialized [-Wmaybe-uninitialized] 421 | return ret; | ^~~ quadtree2.c:406:13: note: ‘ret’ was declared here 406 | qtree2_t *ret; | ^~~ gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o SearchTrees.so quadtree2.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpSJzzFR/R.INSTALL183e276c7d6068/SearchTrees/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-SearchTrees/00new/SearchTrees/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SearchTrees) begin installing package ‘cmsafops’ * installing *source* package ‘xml2’ ... ** this is package ‘xml2’ version ‘1.4.1’ ** package ‘xml2’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/libxml2 Using PKG_LIBS=-lxml2 ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-4) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCCOLmr/R.INSTALL183e2d2db4526c/xml2/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c connection.cpp -o connection.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_doc.cpp -o xml2_doc.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c xml2_init.c -o xml2_init.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_namespace.cpp -o xml2_namespace.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_node.cpp -o xml2_node.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_output.cpp -o xml2_output.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_schema.cpp -o xml2_schema.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_url.cpp -o xml2_url.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I/usr/include/libxml2 -DUCHAR_TYPE=wchar_t -DU_SHOW_CPLUSPLUS_API=0 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c xml2_xpath.cpp -o xml2_xpath.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o xml2.so connection.o init.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCCOLmr/R.INSTALL183e2d2db4526c/xml2/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-xml2/00new/xml2/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xml2) * installing *source* package ‘cmsafops’ ... ** this is package ‘cmsafops’ version ‘1.4.3’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cmsafops) begin installing package ‘cmsafvis’ * installing *source* package ‘cmsafvis’ ... ** this is package ‘cmsafvis’ version ‘1.3.0’ ** package ‘cmsafvis’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cmsafvis) begin installing package ‘cmsaf’ * installing *source* package ‘cmsaf’ ... ** this is package ‘cmsaf’ version ‘3.6.0’ ** package ‘cmsaf’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cmsaf) checking cmsafops_1.4.3.tar.gz ... checking cmsaf_3.6.0.tar.gz ... checking cmsafvis_1.3.0.tar.gz ... Depends: Package: cmsafops Depends: R (>= 3.6) Imports: assertthat (>= 0.2.1), fields (>= 10.3), FNN (>= 1.1), ncdf4 (>= 1.17), rainfarmr (>= 0.1), raster (>= 3.0), progress, trend, SearchTrees, utils Timings: user system elapsed cmsafops 162.931 5.805 171.279 Results: Check status summary: NOTE OK Source packages 1 0 Reverse depends 0 2 Check results summary: cmsafops ... NOTE * checking CRAN incoming feasibility ... [5s/7s] NOTE rdepends_cmsaf ... OK rdepends_cmsafvis ... OK