stopifnot( require("testthat"), require("clustTMB") ) context("test mkFac") test_that("test mkFac", { d <- c(3, 3) map.vec <- rep(factor(NA), d[1] * d[2]) map.dim <- map.vec dim(map.dim) <- d expect_equal(map.dim, mkFac(d, map.vec)) d <- 3 map.vec <- rep(factor(NA), d) expect_equal(map.vec, mkFac(d, map.vec)) }) context("test families") test_that("tweedie", { f <- tweedie() expect_equal("tweedie", f$family) expect_equal("log", f$link) }) test_that("lognormal", { f <- lognormal() expect_equal("lognormal", f$family) expect_equal("identity", f$link) }) context("test fixStruct.lookup") test_that("test fixStruct.lookup", { expect_equal(10, fixStruct.lookup("E")) expect_equal(10, fixStruct.lookup("V")) expect_equal(20, fixStruct.lookup("EII")) expect_equal(20, fixStruct.lookup("VII")) expect_equal(20, fixStruct.lookup("EEI")) expect_equal(20, fixStruct.lookup("VVI")) expect_equal(30, fixStruct.lookup("VVV")) expect_equal(30, fixStruct.lookup("EEE")) }) context("test skewness") test_that("test skewness", { set.seed(123) alpha.seq <- c(0.1, 1, 2, 5) for (a in seq_along(alpha.seq)) { expect_equal(2 / sqrt(alpha.seq[a]), mean(replicate(1000, skewness(rgamma(10000, alpha.seq[a], 1)))), tolerance = 0.01 ) } }) context("test parm.lookup") test_that("test parm.lookup", { expect_equal(23, nrow(parm.lookup()$parm)) expect_equal(c("Fixed", "Random"), unique(parm.lookup()$parm$type)) expect_equal(c("Matrix", "Array", "Vector"), unique(parm.lookup()$parm$str)) expect_equal(10, nrow(parm.lookup()$key)) expect_equal(c("Fr", "Fs", "G", "J", "Kd", "Kg", "M", "N", "T", "V"), parm.lookup()$key$dim) })