R Under development (unstable) (2024-03-06 r86056 ucrt) -- "Unsuffered Consequences"
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> library(testthat)
> 
> test_check("chouca")
Loading required package: chouca
This is chouca 0.1.99 (development version, use at your own risk!)
See vignette("chouca-package") for a user guide or ?chouca for an overview
using C++ compiler: 'g++.exe (GCC) 12.3.0'
using C++11
make[1]: Entering directory '/d/temp/RtmpmKNYF3/sourceCpp-x86_64-w64-mingw32-1.0.12/sourcecpp_1c2e01f4e61d4'
make[1]: Leaving directory '/d/temp/RtmpmKNYF3/sourceCpp-x86_64-w64-mingw32-1.0.12/sourcecpp_1c2e01f4e61d4'
make[1]: Entering directory '/d/temp/RtmpmKNYF3/sourceCpp-x86_64-w64-mingw32-1.0.12/sourcecpp_1c2e01f4e61d4'
g++  -std=gnu++11 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -fopenmp  -I"D:/RCompile/CRANpkg/lib/4.4/Rcpp/include" -I"D:/RCompile/CRANpkg/lib/4.4/RcppArmadillo/include" -I"D:/temp/RtmpmKNYF3/sourceCpp-x86_64-w64-mingw32-1.0.12"   -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c file1c2e047fa5aca.cpp -o file1c2e047fa5aca.o
file1c2e047fa5aca.cpp: In function 'void precompute_transition_probabilites(double (*)[3][3], const unsigned char (*)[4], const arma::uword*)':
file1c2e047fa5aca.cpp:133:13: warning: variable 'qpointn_factorf' set but not used [-Wunused-but-set-variable]
  133 |       uword qpointn_factorf;
      |             ^~~~~~~~~~~~~~~
g++ -shared -s -static-libgcc -o sourceCpp_9.dll tmp.def file1c2e047fa5aca.o -fopenmp -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/RtmpmKNYF3/sourceCpp-x86_64-w64-mingw32-1.0.12/sourcecpp_1c2e01f4e61d4'
make[1]: Entering directory '/d/temp/RtmpmKNYF3/sourceCpp-x86_64-w64-mingw32-1.0.12/sourcecpp_1c2e01f4e61d4'
make[1]: Leaving directory '/d/temp/RtmpmKNYF3/sourceCpp-x86_64-w64-mingw32-1.0.12/sourcecpp_1c2e01f4e61d4'
iter =    0 (  0 %) BARE:0.344 ALGAE:0.333 CORAL:0.323 
iter =  256 ( 25 %) BARE:0.5339 ALGAE:0.0127 CORAL:0.4534 [87.67 iter/s]
iter =  512 ( 50 %) BARE:0.45581 ALGAE:0.00708 CORAL:0.53711 [94.81 iter/s]
iter =  768 ( 75 %) BARE:0.40039 ALGAE:0.00342 CORAL:0.59619 [98.08 iter/s]
iter = 1024 (100 %) BARE:0.36084 ALGAE:0.00366 CORAL:0.63550 [104.07 iter/s]
iter =    0 (  0 %) BARE:0.344 ALGAE:0.333 CORAL:0.323 
iter =  256 ( 25 %) BARE:0.54126 ALGAE:0.00659 CORAL:0.45215 [2327.27 iter/s]
iter =  512 ( 50 %) BARE:0.46045 ALGAE:0.00854 CORAL:0.53101 [2844.44 iter/s]
iter =  768 ( 75 %) BARE:0.40649 ALGAE:0.00781 CORAL:0.58569 [2327.27 iter/s]
iter = 1024 (100 %) BARE:0.3723 ALGAE:0.0061 CORAL:0.6216 [2560.00 iter/s]
dev.new(): using pdf(file="Rplots1.pdf")
dev.new(): using pdf(file="Rplots2.pdf")
dev.new(): using pdf(file="Rplots3.pdf")
dev.new(): using pdf(file="Rplots4.pdf")
dev.new(): using pdf(file="Rplots5.pdf")
dev.new(): using pdf(file="Rplots6.pdf")
Cellular Automaton landscape

Size: 24x24

DEGR  EMPTY DEGR  VEGE  EMPTY ...  
DEGR  DEGR  VEGE  DEGR  EMPTY ...  
EMPTY DEGR  DEGR  DEGR  DEGR  ...  
VEGE  DEGR  DEGR  DEGR  VEGE  ...  
EMPTY DEGR  EMPTY VEGE  DEGR  ...  
...   ...   ...   ...   ...   ...   

Global covers
     DEGR     EMPTY      VEGE 
0.3437500 0.3194444 0.3368056 

The following methods are available: 
   image 
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 110 ]
> 
> proc.time()
   user  system elapsed 
 101.07    4.37  277.79