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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(checkmate)
> library(chevron)
> 
> test_check("chevron")
[ FAIL 8 | WARN 9 | SKIP 236 | PASS 151 ]

══ Skipped tests (236) ═════════════════════════════════════════════════════════
• On CRAN (62): 'test-ael01_nollt.R:7:3', 'test-ael02.R:9:3',
  'test-ael03.R:9:3', 'test-aet01_aesi.R:17:3', 'test-aet03.R:10:3',
  'test-aet04.R:10:3', 'test-aet05.R:7:3', 'test-aet05_all.R:7:3',
  'test-aet10.R:10:3', 'test-chevron_tlg-methods.R:8:3',
  'test-chevron_tlg-methods.R:99:3', 'test-chevron_tlg-methods.R:117:3',
  'test-chevron_tlg-methods.R:137:3', 'test-chevron_tlg-methods.R:334:3',
  'test-chevron_tlg-methods.R:338:3', 'test-cml02a_gl.R:5:3',
  'test-coxt01.R:6:3', 'test-coxt02.R:5:3', 'test-default_tlg.R:5:3',
  'test-default_tlg.R:19:3', 'test-default_tlg.R:33:3',
  'test-default_tlg.R:40:3', 'test-default_tlg.R:47:3',
  'test-default_tlg.R:54:3', 'test-default_tlg.R:61:3',
  'test-default_tlg.R:78:3', 'test-default_tlg.R:86:3',
  'test-default_tlg.R:93:3', 'test-default_tlg.R:100:3',
  'test-default_tlg.R:107:3', 'test-dmt01.R:8:3', 'test-dst01.R:11:3',
  'test-dtht01.R:12:3', 'test-egt01.R:7:3', 'test-egt02.R:7:3',
  'test-egt03.R:7:3', 'test-egt05_qtcat.R:7:3', 'test-ext01.R:7:3',
  'test-ext01.R:61:3', 'test-lbt01.R:11:3', 'test-lbt04.R:7:3',
  'test-lbt05.R:7:3', 'test-lbt07.R:7:3', 'test-lbt14.R:11:3',
  'test-lbt15.R:7:3', 'test-mng01.R:10:5', 'test-pdt01.R:7:3',
  'test-pdt02.R:7:3', 'test-rmpt01.R:7:3', 'test-rmpt03.R:10:3',
  'test-rmpt04.R:7:3', 'test-rmpt05.R:7:3', 'test-rmpt06.R:8:3',
  'test-rspt01.R:5:3', 'test-ttet01.R:10:3', 'test-unwrap.R:8:3',
  'test-unwrap.R:60:3', 'test-unwrap.R:101:3', 'test-unwrap.R:125:3',
  'test-utils.R:76:1', 'test-vst01.R:11:3', 'test-vst02.R:7:3'
• On Windows (174): 'test-ael01_nollt.R:12:3', 'test-ael01_nollt.R:25:3',
  'test-ael01_nollt.R:39:3', 'test-ael01_nollt.R:55:3',
  'test-ael01_nollt.R:71:3', 'test-ael02.R:13:3', 'test-ael02.R:31:3',
  'test-ael03.R:13:3', 'test-ael03.R:31:3', 'test-aet01.R:18:3',
  'test-aet01.R:34:3', 'test-aet01.R:41:3', 'test-aet01.R:54:3',
  'test-aet01.R:73:3', 'test-aet01_aesi.R:23:3', 'test-aet01_aesi.R:35:3',
  'test-aet01_aesi.R:42:3', 'test-aet02.R:18:3', 'test-aet02.R:29:3',
  'test-aet03.R:14:3', 'test-aet04.R:29:3', 'test-aet05.R:11:3',
  'test-aet05_all.R:11:3', 'test-aet10.R:14:3', 'test-cfbt01.R:4:3',
  'test-cfbt01.R:14:3', 'test-chevron_tlg-methods.R:12:3',
  'test-chevron_tlg-methods.R:21:3', 'test-chevron_tlg-methods.R:29:3',
  'test-chevron_tlg-methods.R:37:3', 'test-chevron_tlg-methods.R:56:3',
  'test-chevron_tlg-methods.R:63:3', 'test-chevron_tlg-methods.R:143:3',
  'test-chevron_tlg-methods.R:150:3', 'test-chevron_tlg-methods.R:162:3',
  'test-chevron_tlg-methods.R:182:3', 'test-chevron_tlg-methods.R:189:3',
  'test-chevron_tlg-methods.R:199:3', 'test-chevron_tlg-methods.R:212:3',
  'test-chevron_tlg-methods.R:219:3', 'test-chevron_tlg-methods.R:227:3',
  'test-chevron_tlg-methods.R:238:3', 'test-chevron_tlg-methods.R:244:3',
  'test-chevron_tlg-methods.R:252:3', 'test-chevron_tlg-methods.R:263:3',
  'test-chevron_tlg-methods.R:269:3', 'test-chevron_tlg-methods.R:276:3',
  'test-chevron_tlg-methods.R:286:3', 'test-chevron_tlg-methods.R:293:3',
  'test-chevron_tlg-methods.R:300:3', 'test-chevron_tlg-methods.R:325:3',
  'test-cml02a_gl.R:9:3', 'test-cml02a_gl.R:19:3', 'test-cmt01a.R:11:3',
  'test-cmt01a.R:26:3', 'test-cmt01a.R:39:3', 'test-cmt02_pt.R:13:3',
  'test-coxt01.R:19:3', 'test-coxt02.R:18:3', 'test-dmt01.R:12:3',
  'test-dmt01.R:20:3', 'test-dmt01.R:35:3', 'test-dmt01.R:41:3',
  'test-dmt01.R:47:3', 'test-dmt01.R:53:3', 'test-dmt01.R:61:3',
  'test-dmt01.R:75:3', 'test-dmt01.R:89:3', 'test-dst01.R:15:3',
  'test-dst01.R:27:3', 'test-dst01.R:35:3', 'test-dst01.R:46:3',
  'test-dst01.R:52:3', 'test-dst01.R:58:3', 'test-dtht01.R:16:3',
  'test-dtht01.R:26:3', 'test-egt01.R:13:3', 'test-egt02.R:11:3',
  'test-egt03.R:13:3', 'test-egt03.R:25:3', 'test-egt03.R:34:3',
  'test-egt05_qtcat.R:13:3', 'test-egt05_qtcat.R:24:3',
  'test-empty_report.R:18:3', 'test-ext01.R:11:3', 'test-ext01.R:22:3',
  'test-ext01.R:34:3', 'test-ext01.R:45:3', 'test-ext01.R:65:3',
  'test-ext01.R:77:3', 'test-fstg01.R:13:3', 'test-fstg01.R:24:3',
  'test-fstg01.R:38:3', 'test-fstg02.R:13:3', 'test-fstg02.R:24:3',
  'test-fstg02.R:38:3', 'test-fstg02.R:49:3', 'test-kmg01.R:15:3',
  'test-kmg01.R:32:3', 'test-kmg01.R:47:3', 'test-kmg01.R:60:3',
  'test-lbt01.R:17:3', 'test-lbt01.R:27:3', 'test-lbt04.R:13:3',
  'test-lbt04.R:25:3', 'test-lbt04.R:37:3', 'test-lbt04.R:46:3',
  'test-lbt05.R:16:3', 'test-lbt05.R:28:3', 'test-lbt05.R:42:3',
  'test-lbt05.R:50:3', 'test-lbt05.R:59:3', 'test-lbt05.R:66:3',
  'test-lbt05.R:73:3', 'test-lbt06.R:15:3', 'test-lbt06.R:25:3',
  'test-lbt07.R:13:3', 'test-lbt07.R:27:3', 'test-lbt14.R:15:3',
  'test-lbt14.R:23:3', 'test-lbt14.R:31:3', 'test-lbt14.R:40:3',
  'test-lbt14.R:53:3', 'test-lbt14.R:73:3', 'test-lbt14.R:83:3',
  'test-lbt14.R:94:3', 'test-lbt14.R:108:3', 'test-lbt14.R:128:3',
  'test-lbt14.R:139:3', 'test-lbt15.R:13:3', 'test-lbt15.R:25:3',
  'test-lbt15.R:37:3', 'test-lbt15.R:49:3', 'test-lbt15.R:58:3',
  'test-lbt15.R:67:3', 'test-mht01.R:13:3', 'test-mht01.R:20:3',
  'test-mht01.R:27:3', 'test-mng01.R:15:3', 'test-mng01.R:54:3',
  'test-mng01.R:76:3', 'test-mng01.R:98:3', 'test-mng01.R:110:3',
  'test-mng01.R:128:3', 'test-mng01.R:149:3', 'test-pdt01.R:13:3',
  'test-pdt01.R:26:3', 'test-pdt02.R:13:3', 'test-pdt02.R:26:3',
  'test-rmpt01.R:13:3', 'test-rmpt01.R:25:3', 'test-rmpt01.R:40:3',
  'test-rmpt03.R:16:3', 'test-rmpt03.R:30:3', 'test-rmpt03.R:47:3',
  'test-rmpt04.R:13:3', 'test-rmpt04.R:25:3', 'test-rmpt04.R:47:3',
  'test-rmpt05.R:13:3', 'test-rmpt05.R:25:3', 'test-rmpt05.R:47:3',
  'test-rmpt06.R:12:3', 'test-rmpt06.R:21:3', 'test-rspt01.R:9:3',
  'test-rspt01.R:30:3', 'test-rspt01.R:49:3', 'test-rspt01.R:70:3',
  'test-rspt01.R:91:3', 'test-rspt01.R:121:3', 'test-ttet01.R:26:3',
  'test-ttet01.R:48:3', 'test-ttet01.R:71:3', 'test-vst01.R:17:3',
  'test-vst02.R:11:3'

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-aet01.R:11:3'): aet01 can handle all NA values ─────────────────
Error in `aet01_lyt(arm_var = arm_var, lbl_overall = lbl_overall, anl_vars = anl_vars, 
    anl_lbls = anl_lbls, lbl_vars = lbl_vars)`: non-interactive browser() -- left over from debugging?
Backtrace:
     ▆
  1. ├─testthat::expect_silent(run(aet01, proc_data)) at test-aet01.R:11:3
  2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
  3. │   ├─testthat (local) .capture(...)
  4. │   │ ├─withr::with_output_sink(...)
  5. │   │ │ └─base::force(code)
  6. │   │ ├─base::withCallingHandlers(...)
  7. │   │ └─base::withVisible(code)
  8. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
  9. ├─chevron::run(aet01, proc_data)
 10. ├─chevron::run(aet01, proc_data)
 11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
 12. │   └─base::do.call(what, new_args, envir = args_env)
 13. └─chevron (local) `<fn>`(adam_db = adam_db)
 14.   └─chevron:::aet01_lyt(...)
── Error ('test-chevron_tlg-methods.R:84:3'): run print internal functions when unwrap is TRUE ──
Error in `(function (adam_db, arm_var = "ACTARM", row_split_var = "AEBODSYS", 
    lbl_overall = NULL, summary_labels = list(all = aet02_label, 
        TOTAL = c(nonunique = "Overall total number of events")), 
    ...) 
{
    assert_all_tablenames(adam_db, "adsl", "adae")
    assert_string(arm_var)
    assert_character(row_split_var, null.ok = TRUE)
    assert_string(lbl_overall, null.ok = TRUE)
    assert_valid_variable(adam_db$adsl, c("USUBJID", arm_var), 
        types = list(c("character", "factor")))
    assert_valid_variable(adam_db$adae, c(arm_var, row_split_var, 
        "AEDECOD"), types = list(c("character", "factor")))
    assert_valid_variable(adam_db$adae, "USUBJID", empty_ok = TRUE, 
        types = list(c("character", "factor")))
    assert_valid_var_pair(adam_db$adsl, adam_db$adae, arm_var)
    assert_list(summary_labels, null.ok = TRUE)
    assert_subset(names(summary_labels), c("all", "TOTAL", row_split_var))
    assert_subset(unique(unlist(lapply(summary_labels, names))), 
        c("unique", "nonunique", "unique_count"))
    summary_labels <- expand_list(summary_labels, c("TOTAL", 
        row_split_var))
    lbl_overall <- render_safe(lbl_overall)
    lbl_row_split <- var_labels_for(adam_db$adae, row_split_var)
    lbl_aedecod <- var_labels_for(adam_db$adae, "AEDECOD")
    browser()
    lyt <- occurrence_lyt(arm_var = arm_var, lbl_overall = lbl_overall, 
        row_split_var = row_split_var, lbl_row_split = lbl_row_split, 
        medname_var = "AEDECOD", lbl_medname_var = lbl_aedecod, 
        summary_labels = summary_labels, count_by = NULL)
    tbl <- build_table(lyt, adam_db$adae, alt_counts_df = adam_db$adsl)
    tbl
})(adam_db = adam_db, prune_0 = prune_0)`: non-interactive browser() -- left over from debugging?
Backtrace:
     ▆
  1. ├─testthat::capture_output(...) at test-chevron_tlg-methods.R:84:3
  2. │ └─testthat::capture_output_lines(code, print, width = width)
  3. │   └─testthat:::eval_with_output(code, print = print, width = width)
  4. │     ├─withr::with_output_sink(path, withVisible(code))
  5. │     │ └─base::force(code)
  6. │     └─base::withVisible(code)
  7. ├─chevron::run(...)
  8. ├─chevron::run(...)
  9. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
 10. │   └─base::do.call(what, new_args, envir = args_env)
 11. └─chevron (local) `<fn>`(adam_db = adam_db, prune_0 = prune_0)
── Error ('test-cmt01a.R:5:3'): cmt01a functions with default argument value return expected result with test data ──
Error in `occurrence_lyt(arm_var = arm_var, lbl_overall = lbl_overall, 
    row_split_var = row_split_var, lbl_row_split = lbl_row_split, 
    medname_var = medname_var, lbl_medname_var = lbl_medname_var, 
    summary_labels = summary_labels, count_by = "CMSEQ")`: non-interactive browser() -- left over from debugging?
Backtrace:
    ▆
 1. └─chevron::cmt01a_main(pre_data) at test-cmt01a.R:5:3
 2.   └─chevron:::occurrence_lyt(...)
── Error ('test-cmt02_pt.R:8:3'): cmt02_pt can handle all NA values ────────────
Error in `occurrence_lyt(arm_var = arm_var, lbl_overall = lbl_overall, 
    row_split_var = row_split_var, lbl_row_split = lbl_row_split, 
    medname_var = medname_var, lbl_medname_var = lbl_medname_var, 
    summary_labels = summary_labels, count_by = "CMSEQ")`: non-interactive browser() -- left over from debugging?
Backtrace:
     ▆
  1. ├─testthat::expect_silent(run(cmt02_pt, proc_data)) at test-cmt02_pt.R:8:3
  2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
  3. │   ├─testthat (local) .capture(...)
  4. │   │ ├─withr::with_output_sink(...)
  5. │   │ │ └─base::force(code)
  6. │   │ ├─base::withCallingHandlers(...)
  7. │   │ └─base::withVisible(code)
  8. │   └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
  9. ├─chevron::run(cmt02_pt, proc_data)
 10. ├─chevron::run(cmt02_pt, proc_data)
 11. │ └─chevron:::do_call(object@main, c(proc_data, user_args))
 12. │   └─base::do.call(what, new_args, envir = args_env)
 13. └─chevron (local) `<fn>`(adam_db = adam_db)
 14.   └─chevron:::occurrence_lyt(...)
── Error ('test-default_tlg.R:10:3'): aet01 function with default argument value return expected result with test data ──
Error in `aet01_lyt(arm_var = arm_var, lbl_overall = lbl_overall, anl_vars = anl_vars, 
    anl_lbls = anl_lbls, lbl_vars = lbl_vars)`: non-interactive browser() -- left over from debugging?
Backtrace:
    ▆
 1. └─chevron::aet01_main(pre_data) at test-default_tlg.R:10:3
 2.   └─chevron:::aet01_lyt(...)
── Error ('test-default_tlg.R:24:3'): aet02 functions with default argument value return expected result with test data ──
Error in `aet02_main(pre_data)`: non-interactive browser() -- left over from debugging?
Backtrace:
    ▆
 1. └─chevron::aet02_main(pre_data) at test-default_tlg.R:24:3
── Error ('test-default_tlg.R:66:3'): cmt02_pt functions with default argument value return expected result with test data ──
Error in `occurrence_lyt(arm_var = arm_var, lbl_overall = lbl_overall, 
    row_split_var = row_split_var, lbl_row_split = lbl_row_split, 
    medname_var = medname_var, lbl_medname_var = lbl_medname_var, 
    summary_labels = summary_labels, count_by = "CMSEQ")`: non-interactive browser() -- left over from debugging?
Backtrace:
    ▆
 1. └─chevron::cmt02_pt_main(pre_data) at test-default_tlg.R:66:3
 2.   └─chevron:::occurrence_lyt(...)
── Error ('test-mht01.R:5:3'): mht01 functions with default argument value return expected result with test data ──
Error in `occurrence_lyt(arm_var = arm_var, lbl_overall = lbl_overall, 
    row_split_var = row_split_var, lbl_row_split = lbl_row_split, 
    medname_var = "MHDECOD", lbl_medname_var = lbl_mhdecod, summary_labels = summary_labels, 
    count_by = "MHSEQ")`: non-interactive browser() -- left over from debugging?
Backtrace:
    ▆
 1. └─chevron::mht01_main(pre_data) at test-mht01.R:5:3
 2.   └─chevron:::occurrence_lyt(...)

[ FAIL 8 | WARN 9 | SKIP 236 | PASS 151 ]
Deleting unused snapshots:
• mng01/mng01-with-custom-theme.svg
• mng01/run-mng01-with-combination-of-x-variables.svg
• mng01/run-mng01-with-custom-color-set.svg
• mng01/run-mng01-with-custom-line-type-set.svg
• mng01/run-mng01-with-custom-unnamed-color-set.svg
• mng01/run-mng01-with-custom-unnamed-line-type-set.svg
• mng01/run-mng01-with-jitter.svg
• mng01/run-mng01-with-numeric-x-variables.svg
• mng01/run-mng01-without-table.svg
Error: Test failures
Execution halted