* using log directory 'd:/RCompile/CRANincoming/R-devel/chem16S.Rcheck' * using R Under development (unstable) (2023-07-09 r84667 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.2.0 GNU Fortran (GCC) 12.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'chem16S/DESCRIPTION' ... OK * this is package 'chem16S' version '1.0.0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Jeffrey Dick ' New submission Possibly misspelled words in DESCRIPTION: Bioconductor (27:3) GTDB (22:13) NCBI (22:71) OTU (26:24) Proteomes (4:48) RDP (23:68, 25:76) RefSeq (23:23, 24:19) Zc (17:54) archaea (21:27) archaeal (15:46) hydropathicity (19:20) isoelectric (19:44) nH (18:42) nO (18:34) pI (19:63) precomputed (20:69) proteomes (15:33, 16:59, 21:13, 22:44) rRNA (14:72) stoichiometric (17:59) Found the following URLs which should use \doi (with the DOI name only): File 'chem16S-package.Rd': https://doi.org/10.5281/zenodo.7633100 File 'map_taxa.Rd': https://doi.org/10.5281/zenodo.7633100 https://doi.org/10.5281/zenodo.6655692 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'chem16S' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [13s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK Running 'tinytest.R' * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [24s] OK * checking PDF version of manual ... [13s] OK * checking HTML version of manual ... OK * DONE Status: 1 NOTE