R Under development (unstable) (2024-06-11 r86723 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(cfr) > > test_check("cfr") Total cases = 245 and p = 0.955: using Normal approximation to binomial likelihood. Total cases = 245 and p = 0.955: using Normal approximation to binomial likelihood. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. Some daily ratios of total deaths to total cases with known outcome are below 0.01%: some CFR estimates may be unreliable.FALSE Total cases = 245 and p = 0.955: using Normal approximation to binomial likelihood. Total cases = 245 and p = 0.959: using Normal approximation to binomial likelihood. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. Some daily ratios of total deaths to total cases with known outcome are below 0.01%: some CFR estimates may be unreliable.FALSE Total cases = 245 and p = 0.959: using Normal approximation to binomial likelihood. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. Total cases = 245 and p = 0.959: using Normal approximation to binomial likelihood. Total cases = 245 and p = 0.959: using Normal approximation to binomial likelihood. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. Some daily ratios of total deaths to total cases with known outcome are below 0.01%: some CFR estimates may be unreliable.FALSE Total cases = 245 and p = 0.959: using Normal approximation to binomial likelihood. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. Some daily ratios of total deaths to total cases with known outcome are below 0.01%: some CFR estimates may be unreliable.FALSE `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. Total cases = 245 and p = 0.959: using Normal approximation to binomial likelihood. Total cases = 245 and p = 0.959: using Normal approximation to binomial likelihood. Total cases = 505000 and p = 1.4e-05: using Poisson approximation to binomial likelihood. `cfr_rolling()` is a convenience function to help understand how additional data influences the overall (static) severity. Use `cfr_time_varying()` instead to estimate severity changes over the course of the outbreak. [ FAIL 0 | WARN 2 | SKIP 11 | PASS 113 ] ══ Skipped tests (11) ══════════════════════════════════════════════════════════ • On CRAN (11): 'test-estimate_ascertainment.R:34:3', 'test-estimate_ascertainment.R:65:3', 'test-estimate_ascertainment.R:81:3', 'test-estimate_outcomes.R:46:3', 'test-estimate_rolling.R:52:3', 'test-estimate_severity.R:47:3', 'test-estimate_static.R:37:3', 'test-estimate_time_varying.R:41:3', 'test-estimate_time_varying.R:105:3', 'test-prepare_data.R:35:3', 'test-prepare_data.R:126:3' [ FAIL 0 | WARN 2 | SKIP 11 | PASS 113 ] > > proc.time() user system elapsed 8.71 1.00 9.71