downloading reverse dependencies ... downloading cdcatR_1.0.6.tar.gz ... ok downloading GDINA_2.9.9.tar.gz ... ok installing dependencies ‘cdmTools’, ‘fungible’, ‘GDINA’, ‘NPCD’ also installing the dependency ‘Rcsdp’ begin installing package ‘Rcsdp’ begin installing package ‘GDINA’ begin installing package ‘NPCD’ * installing *source* package ‘NPCD’ ... ** this is package ‘NPCD’ version ‘1.0-11’ ** package ‘NPCD’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NPCD) * installing *source* package ‘Rcsdp’ ... ** this is package ‘Rcsdp’ version ‘0.1.57.5’ ** package ‘Rcsdp’ successfully unpacked and MD5 sums checked ** using staged installation Using bundled CSDP checking for gcc... gcc-14 -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-14 -std=gnu23 accepts -g... yes checking for gcc-14 -std=gnu23 option to enable C11 features... none needed checking how to run the C preprocessor... gcc-14 -std=gnu23 -E configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4tj8Yr/R.INSTALL1d2cb266e8c6b4/Rcsdp/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -ICsdp/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNOSHORTS -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Rcsdp.c -o Rcsdp.o Rcsdp.c: In function ‘csdp’: Rcsdp.c:37:47: warning: variable ‘blocksizes’ set but not used [-Wunused-but-set-variable] 37 | int n, nblocks, nconstraints, *blocktypes, *blocksizes; | ^~~~~~~~~~ Rcsdp.c:37:34: warning: variable ‘blocktypes’ set but not used [-Wunused-but-set-variable] 37 | int n, nblocks, nconstraints, *blocktypes, *blocksizes; | ^~~~~~~~~~ Rcsdp.c:37:10: warning: variable ‘nblocks’ set but not used [-Wunused-but-set-variable] 37 | int n, nblocks, nconstraints, *blocktypes, *blocksizes; | ^~~~~~~ Rcsdp.c: In function ‘writesdpa’: Rcsdp.c:230:10: warning: variable ‘nblocks’ set but not used [-Wunused-but-set-variable] 230 | int n, nblocks, nconstraints, status; | ^~~~~~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -ICsdp/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNOSHORTS -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c convert.c -o convert.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -ICsdp/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNOSHORTS -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c testing.c -o testing.o (cd Csdp/lib && \ (make libsdp.a CC="gcc-14 -std=gnu23" CFLAGS="-g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include" AR="ar" RANLIB="ranlib") && \ touch Csdp.ts) make[2]: Entering directory '/home/hornik/tmp/scratch/Rtmp4tj8Yr/R.INSTALL1d2cb266e8c6b4/Rcsdp/src/Csdp/lib' gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o readprob.o readprob.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o sdp.o sdp.c sdp.c: In function ‘sdp’: sdp.c:748: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 748 | #pragma omp parallel for schedule(dynamic,64) default(none) shared(O,ldam,k,workvec8) private(i,j) sdp.c:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 793 | #pragma omp parallel for schedule(dynamic,64) private(i,j) shared(O,k,ldam) sdp.c:142:7: warning: variable ‘lastimprove’ set but not used [-Wunused-but-set-variable] 142 | int lastimprove=0; | ^~~~~~~~~~~ sdp.c:131:10: warning: variable ‘newdobj’ set but not used [-Wunused-but-set-variable] 131 | double newdobj; | ^~~~~~~ sdp.c:130:10: warning: variable ‘newpobj’ set but not used [-Wunused-but-set-variable] 130 | double newpobj; | ^~~~~~~ sdp.c:129:10: warning: variable ‘oldmaxrelinfeas’ set but not used [-Wunused-but-set-variable] 129 | double oldmaxrelinfeas=1.0e100; | ^~~~~~~~~~~~~~~ sdp.c:112:10: warning: variable ‘oldmu’ set but not used [-Wunused-but-set-variable] 112 | double oldmu; | ^~~~~ gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o op_o.o op_o.c op_o.c: In function ‘op_o’: op_o.c:124: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 124 | #pragma omp parallel for schedule(dynamic,64) default(none) shared(O,ldam,k) private(j,i) op_o.c:136: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 136 | #pragma omp parallel for schedule(dynamic,64) default(none) shared(k,constraints,byblocks,Zi,X,O,work1, work2, work, ldam) private(j, ii, jj, blocksize, p, q, r, s, ptri, ptrj, blocknum, contrib, Ziblk, Xblk, workblk, work2blk, enti, entj, scale1, scale2, thread_num) op_o.c:432: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 432 | #pragma omp parallel for schedule(dynamic,64) default(none) shared(O,ldam,k) private(j,i) gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o psd_feas.o psd_feas.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o op_a.o op_a.c op_a.c: In function ‘op_a’: op_a.c:23: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 23 | #pragma omp parallel for schedule(dynamic,64) default(none) private(i,contrib,ptr,blk,nume,vec,j,p,mat,ent,q) shared(k,constraints,result,X) gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o op_at.o op_at.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o Fnorm.o Fnorm.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o calc_pobj.o calc_pobj.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o calc_dobj.o calc_dobj.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o trace_prod.o trace_prod.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o zero_mat.o zero_mat.c zero_mat.c: In function ‘zero_mat’: zero_mat.c:32: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 32 | #pragma omp parallel for schedule(dynamic,64) default(none) shared(A,blk) private(j,i) gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o mat_mult.o mat_mult.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o sym_mat.o sym_mat.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o copy_mat.o copy_mat.c copy_mat.c: In function ‘copy_mat’: copy_mat.c:27: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 27 | #pragma omp parallel for schedule(dynamic,64) private(i,j) shared(p,q) gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o addscaledmat.o addscaledmat.c addscaledmat.c: In function ‘addscaledmat’: addscaledmat.c:30: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 30 | #pragma omp parallel for schedule(dynamic,64) default(none) private(i,j) shared(A,B,C,scale,blk) gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o user_exit.o user_exit.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o make_i.o make_i.c make_i.c: In function ‘make_i’: make_i.c:24: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 24 | #pragma omp parallel for schedule(dynamic,64) default(none) private(i,j) shared(blk,p,A) gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o allocmat.o allocmat.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o initsoln.o initsoln.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o initparams.o initparams.c initparams.c: In function ‘initparams’: initparams.c:33:11: warning: variable ‘ret’ set but not used [-Wunused-but-set-variable] 33 | int ret = fscanf(paramfile,"%*[^=]%*c%lf",&(params->axtol)); | ^~~ gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o add_mat.o add_mat.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o writesol.o writesol.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o readsol.o readsol.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o easysdp.o easysdp.c easysdp.c: In function ‘easy_sdp’: easysdp.c:61:7: warning: variable ‘blk’ set but not used [-Wunused-but-set-variable] 61 | int blk; | ^~~ gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o writeprob.o writeprob.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o solvesys.o solvesys.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o makefill.o makefill.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o mat_multsp.o mat_multsp.c mat_multsp.c: In function ‘mat_multspb’: mat_multsp.c:171: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 171 | #pragma omp parallel for schedule(dynamic,64) default(none) private(i,j) shared(blk,C,scale2) mat_multsp.c:57:7: warning: unused variable ‘thread_num’ [-Wunused-variable] 57 | int thread_num; | ^~~~~~~~~~ mat_multsp.c:56:7: warning: unused variable ‘total_threads’ [-Wunused-variable] 56 | int total_threads; | ^~~~~~~~~~~~~ mat_multsp.c: In function ‘mat_multspa’: mat_multsp.c:410: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 410 | #pragma omp parallel for default(none) schedule(dynamic,64) private(i,j) shared(blk,C,scale2) mat_multsp.c:295:7: warning: unused variable ‘thread_num’ [-Wunused-variable] 295 | int thread_num; | ^~~~~~~~~~ mat_multsp.c:294:7: warning: unused variable ‘total_threads’ [-Wunused-variable] 294 | int total_threads; | ^~~~~~~~~~~~~ mat_multsp.c: In function ‘mat_multspc’: mat_multsp.c:595: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 595 | #pragma omp parallel for schedule(dynamic,64) default(none) private(i,ii,p,q,temp) shared(ptr,A,B,C,blk,blksize,scale1) mat_multsp.c:636: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 636 | #pragma omp parallel for default(none) schedule(dynamic,64) private(i,j) shared(blk,C,scale2) gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o norms.o norms.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o linesearch.o linesearch.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o matvec.o matvec.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o chol.o chol.c chol.c: In function ‘chol_inv’: chol.c:150:10: warning: variable ‘scale’ set but not used [-Wunused-but-set-variable] 150 | double scale; | ^~~~~ gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o qreig.o qreig.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o tweakgap.o tweakgap.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o freeprob.o freeprob.c gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o packed.o packed.c packed.c: In function ‘store_packed’: packed.c:30: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 30 | #pragma omp parallel for schedule(dynamic,64) private(i,j) shared(p,q,n) packed.c: In function ‘store_unpacked’: packed.c:63: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 63 | #pragma omp parallel for schedule(dynamic,64) private(i,j) shared(p,q,n) packed.c: In function ‘triu’: packed.c:188: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 188 | #pragma omp parallel for schedule(dynamic,64) private(i,j) shared(A,n) gcc-14 -std=gnu23 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fpic -DNOSHORTS -I../include -c -o sortentries.o sortentries.c ar cr libsdp.a readprob.o sdp.o op_o.o psd_feas.o op_a.o op_at.o Fnorm.o calc_pobj.o calc_dobj.o trace_prod.o zero_mat.o mat_mult.o sym_mat.o copy_mat.o addscaledmat.o user_exit.o make_i.o allocmat.o initsoln.o initparams.o add_mat.o writesol.o readsol.o easysdp.o writeprob.o solvesys.o makefill.o mat_multsp.o norms.o linesearch.o matvec.o chol.o qreig.o tweakgap.o freeprob.o packed.o sortentries.o make[2]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4tj8Yr/R.INSTALL1d2cb266e8c6b4/Rcsdp/src/Csdp/lib' gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o Rcsdp.so Rcsdp.o convert.o testing.o -LCsdp/lib -lsdp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -lm -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4tj8Yr/R.INSTALL1d2cb266e8c6b4/Rcsdp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Rcsdp/00new/Rcsdp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rcsdp) begin installing package ‘fungible’ * installing *source* package ‘fungible’ ... ** this is package ‘fungible’ version ‘2.4.4’ ** package ‘fungible’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fungible) * installing *source* package ‘GDINA’ ... ** this is package ‘GDINA’ version ‘2.9.9’ ** package ‘GDINA’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpsngkYY/R.INSTALL1d2cb3758dcbf9/GDINA/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Lik.cpp -o Lik.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Lik2.cpp -o Lik2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c LouisC.cpp -o LouisC.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Mord.cpp -o Mord.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Mstep.cpp -o Mstep.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c NgRg.cpp -o NgRg.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c SE.cpp -o SE.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c aggregateCol.cpp -o aggregateCol.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fitstats.cpp -o fitstats.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c scorep.cpp -o scorep.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sequP.cpp -o sequP.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util.cpp -o util.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c varsigma.cpp -o varsigma.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o GDINA.so Lik.o Lik2.o LouisC.o Mord.o Mstep.o NgRg.o RcppExports.o SE.o aggregateCol.o fitstats.o scorep.o sequP.o util.o varsigma.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpsngkYY/R.INSTALL1d2cb3758dcbf9/GDINA/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-GDINA/00new/GDINA/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GDINA) begin installing package ‘cdmTools’ * installing *source* package ‘cdmTools’ ... ** this is package ‘cdmTools’ version ‘1.0.6’ ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cdmTools) checking cdmTools_1.0.6.tar.gz ... checking cdcatR_1.0.6.tar.gz ... checking GDINA_2.9.9.tar.gz ... Depends: Package: cdmTools Depends: R (>= 3.6.0) Imports: GDINA (>= 2.8.0), ggplot2 (>= 3.3.0), psych (>= 1.9.12), sirt (>= 3.9-4), parallel (>= 3.6.3), stats (>= 3.6.3), GPArotation (>= 2014.11-1), combinat (>= 0.0-8), fungible, foreach, doSNOW, plyr Timings: user system elapsed cdmTools 83.806 6.661 91.228 Results: Check status summary: NOTE OK Source packages 1 0 Reverse depends 1 1 Check results summary: cdmTools ... NOTE * checking CRAN incoming feasibility ... [5s/5s] NOTE rdepends_cdcatR ... NOTE * checking package subdirectories ... NOTE rdepends_GDINA ... OK