# Needed for CRAN CPU note. Note, not sufficient to set environment variable, as seen here: # https://stackoverflow.com/questions/27319619/how-can-i-set-the-number-of-openmp-threads-from-within-the-program RhpcBLASctl::omp_set_num_threads(2) RhpcBLASctl::blas_set_num_threads(2) status <- verify_tetrad() java_ok <- status$java_ok tetrad_installed <- status$installed if (!java_ok) { message( "Java not found or version is too old. Skipping tests requiring rJava" ) } if (!tetrad_installed) { message( "Tetrad not installed. Skipping tests requiring Tetrad." ) } ## Copy pasted from testthat internal function: # on_cran <- function() { # env <- Sys.getenv("NOT_CRAN") # if (identical(env, "")) { # !interactive() # } else { # !isTRUE(as.logical(env)) # } # } ## Skipping Tetrad install on CRAN - am I even allowed to do it on CRAN?. ## GA workflows uses .github/workflows/install-tetrad.R ## Tetrad sometimes seems to sometimes have CPU wall time > 2.5 ## (not allowed on CRAN). Only when initializing Java this seems to happen? ## E.g. I had a CRAN note appear on debian because user+system in TetradSearch examples was 2.8s, ## and it elapsed 1.1sec, and 2.8/1.1 > 2.5. # if (java_ok && !tetrad_installed) { # if (!on_cran()) { # install_tetrad() # status <- verify_tetrad() # tetrad_installed <- status$installed # } else { # message( # "Running on CRAN. Skipping Tetrad installation and tests requiring Tetrad." # ) # } # }