R Under development (unstable) (2025-07-14 r88410 ucrt) -- "Unsuffered Consequences"
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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
> 
> library(testthat)
> library(cancerradarr)
> 
> test_check("cancerradarr")

> input_file_test.xlsx has been created, please fill it with cancer registry data
> Reading D:/RCompile/CRANincoming/R-devel/lib/cancerradarr/extdata/ex_cancerRADAR_input_filled.xlsx
> Reference population aggregation
custom aggregation ==================>------------   58% |  ETA:  2s

> Aggregation level: un_region
	- Data aggregation..
custom aggregation =>-----------------------------    3% |  ETA: 38s
custom aggregation ====>--------------------------   14% |  ETA: 27s
custom aggregation =======>-----------------------   23% |  ETA: 25s
custom aggregation =============>-----------------   45% |  ETA: 13s
custom aggregation ================>--------------   54% |  ETA: 11s
custom aggregation =======================>-------   78% |  ETA:  5s
custom aggregation ========================>------   80% |  ETA:  5s
custom aggregation ==========================>----   88% |  ETA:  3s

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..
> Aggregation level: un_subregion
	- Data aggregation..
custom aggregation ==>----------------------------    6% |  ETA: 20s
custom aggregation ==>----------------------------    7% |  ETA:  1m
custom aggregation ===>---------------------------   10% |  ETA:  1m
custom aggregation ====>--------------------------   13% |  ETA:  1m
custom aggregation =====>-------------------------   17% |  ETA:  1m
custom aggregation ======>------------------------   20% |  ETA:  1m
custom aggregation ========>----------------------   25% |  ETA:  1m
custom aggregation =========>---------------------   29% |  ETA:  1m
custom aggregation =========>---------------------   30% |  ETA:  1m
custom aggregation =============>-----------------   44% |  ETA: 36s
custom aggregation ==============>----------------   48% |  ETA: 33s
custom aggregation ================>--------------   52% |  ETA: 32s
custom aggregation ================>--------------   54% |  ETA: 31s
custom aggregation =================>-------------   58% |  ETA: 29s
custom aggregation ====================>----------   67% |  ETA: 22s
custom aggregation =====================>---------   70% |  ETA: 19s
custom aggregation ======================>--------   74% |  ETA: 18s
custom aggregation =======================>-------   77% |  ETA: 16s
custom aggregation ========================>------   81% |  ETA: 13s
custom aggregation ===========================>---   89% |  ETA:  7s
custom aggregation ============================>--   94% |  ETA:  4s
custom aggregation ==============================>   98% |  ETA:  1s

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..
> Aggregation level: hdi_cat
	- Data aggregation..
custom aggregation =====>-------------------------   18% |  ETA: 13s
custom aggregation =======>-----------------------   24% |  ETA: 15s
custom aggregation ==============>----------------   45% |  ETA:  9s
custom aggregation ==================>------------   58% |  ETA:  8s
custom aggregation =====================>---------   69% |  ETA:  6s
custom aggregation =========================>-----   82% |  ETA:  4s
custom aggregation =============================>-   95% |  ETA:  1s

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..
> Aggregation level: any_migr
	- Data aggregation..
custom aggregation ==========================>----   88% |  ETA:  0s

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..
> Aggregation level: asr_rank_cat
	- Data aggregation..
custom aggregation ===>---------------------------   10% |  ETA: 22s
custom aggregation =======>-----------------------   23% |  ETA: 18s
custom aggregation ==========>--------------------   33% |  ETA: 16s
custom aggregation ==============>----------------   45% |  ETA: 13s
custom aggregation ===================>-----------   63% |  ETA:  8s

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..

> D:\temp\2025_07_15_11_30_16_1572\RtmpYHFDrX\file2403429ff5ab4.xlsx created!
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
> 
> proc.time()
   user  system elapsed 
 271.59   35.46  307.39