R Under development (unstable) (2025-07-09 r88393 ucrt) -- "Unsuffered Consequences"
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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
> 
> library(testthat)
> library(cancerradarr)
> 
> test_check("cancerradarr")

> input_file_test.xlsx has been created, please fill it with cancer registry data
> Reading D:/RCompile/CRANincoming/R-devel/lib/cancerradarr/extdata/ex_cancerRADAR_input_filled.xlsx
> Reference population aggregation
custom aggregation ===============>---------------   50% |  ETA:  2s

> Aggregation level: un_region
	- Data aggregation..
custom aggregation ==>----------------------------    7% |  ETA: 25s
custom aggregation =====>-------------------------   17% |  ETA: 24s
custom aggregation ============>------------------   42% |  ETA: 11s
custom aggregation ==================>------------   59% |  ETA:  7s
custom aggregation ========================>------   79% |  ETA:  4s
custom aggregation ==========================>----   88% |  ETA:  2s

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..
> Aggregation level: un_subregion
	- Data aggregation..
custom aggregation ==>----------------------------    7% |  ETA: 27s
custom aggregation ===>---------------------------    9% |  ETA: 46s
custom aggregation ====>--------------------------   14% |  ETA: 47s
custom aggregation ======>------------------------   18% |  ETA: 48s
custom aggregation =======>-----------------------   24% |  ETA: 42s
custom aggregation =========>---------------------   29% |  ETA: 40s
custom aggregation ==========>--------------------   33% |  ETA: 39s
custom aggregation ===============>---------------   50% |  ETA: 23s
custom aggregation ================>--------------   54% |  ETA: 22s
custom aggregation ==================>------------   58% |  ETA: 21s
custom aggregation ====================>----------   67% |  ETA: 16s
custom aggregation =====================>---------   71% |  ETA: 14s
custom aggregation =======================>-------   76% |  ETA: 12s
custom aggregation ========================>------   80% |  ETA: 10s
custom aggregation ===========================>---   91% |  ETA:  4s
custom aggregation =============================>-   97% |  ETA:  1s

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..
> Aggregation level: hdi_cat
	- Data aggregation..
custom aggregation =======>-----------------------   23% |  ETA: 11s
custom aggregation ==============>----------------   48% |  ETA:  7s
custom aggregation ===================>-----------   63% |  ETA:  5s
custom aggregation =========================>-----   83% |  ETA:  2s

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..
> Aggregation level: any_migr
	- Data aggregation..

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..
> Aggregation level: asr_rank_cat
	- Data aggregation..
custom aggregation ====>--------------------------   14% |  ETA: 19s
custom aggregation ==========>--------------------   32% |  ETA: 13s
custom aggregation ===============>---------------   51% |  ETA:  9s

	- Incidence rates (ir)..
	- Proportional rates (pr)..
	- Crude incidence rates (cir)..
	- Age-standardized incidence rate (asir)..
	- Crude incidence rates ratio (cirr)..
	- Age-standardized incidence rates ratio (asirr)..
	- Crude incidence rates difference (cird)..
	- Age-standardized incidence rates difference (asird)..
	- Indirect standardized incidence ratio (sir)..
	- Proportional incidence ratio (pir)..
	- Total number of cancer..

> D:\temp\2025_07_10_09_20_16_7163\RtmpOu5lNZ\file749c47ba18e3.xslsx created!
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 2 ]
> 
> proc.time()
   user  system elapsed 
 212.92   19.01  231.92