## ---- test-indirect lapply( X = 1, FUN = function(i, text, tol) { message(text) answer <- 0.4008043 phi <- matrix( data = c( -0.357, 0.771, -0.450, 0.0, -0.511, 0.729, 0, 0, -0.693 ), nrow = 3 ) colnames(phi) <- rownames(phi) <- c("x", "m", "y") delta_t <- 2 testthat::test_that( paste(text, "Indirect"), { testthat::expect_true( ( answer - Indirect( phi = phi, delta_t = delta_t, from = "x", to = "y", med = "m" )$output ) <= tol ) } ) testthat::test_that( paste(text, "Med"), { testthat::expect_true( ( answer - Med( phi = phi, delta_t = delta_t, from = "x", to = "y", med = "m" )$output[, "indirect"] ) <= tol ) } ) med <- Med( phi = phi, delta_t = 1:5, from = "x", to = "y", med = "m" ) print(med) summary(med) plot(med) plot(med, col = 1:3) med <- Med( phi = phi, delta_t = 1, from = "x", to = "y", med = "m" ) print(med) summary(med) testthat::test_that( paste(text, "plot error"), { testthat::expect_error( plot(med) ) } ) indirect <- Indirect( phi = phi, delta_t = delta_t, from = "x", to = "y", med = "m" ) print(indirect) }, text = "test-indirect", tol = 0.00001 )