## ---- test-direct lapply( X = 1, FUN = function(i, text, tol) { message(text) answer <- -0.3209035 phi <- matrix( data = c( -0.357, 0.771, -0.450, 0.0, -0.511, 0.729, 0, 0, -0.693 ), nrow = 3 ) colnames(phi) <- rownames(phi) <- c("x", "m", "y") delta_t <- 2 testthat::test_that( paste(text, "Direct"), { testthat::expect_true( ( answer - Direct( phi = phi, delta_t = delta_t, from = "x", to = "y", med = "m" )$output ) <= tol ) } ) testthat::test_that( paste(text, "DirectVec"), { testthat::expect_true( ( answer - cTMed:::.DirectVec( phi = as.vector(phi), delta_t = delta_t, from = 1, to = 3, med = 2 ) ) <= tol ) } ) testthat::test_that( paste(text, "Med"), { testthat::expect_true( ( answer - Med( phi = phi, delta_t = delta_t, from = "x", to = "y", med = "m" )$output[, "direct"] ) <= tol ) } ) med <- Med( phi = phi, delta_t = 1:5, from = "x", to = "y", med = "m" ) print(med) summary(med) plot(med) plot(med, col = 1:3) med <- Med( phi = phi, delta_t = 1, from = "x", to = "y", med = "m" ) print(med) summary(med) testthat::test_that( paste(text, "plot error"), { testthat::expect_error( plot(med) ) } ) direct <- Direct( phi = phi, delta_t = delta_t, from = "x", to = "y", med = "m" ) print(direct) }, text = "test-direct", tol = 0.00001 )