* using log directory 'd:/RCompile/CRANincoming/R-devel/c060.Rcheck' * using R Under development (unstable) (2025-09-17 r88852 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.2.0 GNU Fortran (GCC) 14.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'c060/DESCRIPTION' ... OK * this is package 'c060' version '0.4-0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [14s] NOTE Maintainer: 'Frederic Bertrand ' New maintainer: Frederic Bertrand Old maintainer(s): Frederic Bertrand * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'c060' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [12s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running 'testthat.R' Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(c060) > > test_check("c060") 121 2 3 4 5 [ FAIL 2 | WARN 0 | SKIP 2 | PASS 38 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • No datasets directory present (1): 'test-datasets.R:5:5' • No man/ directory to parse (1): 'test-load-and-exports.R:23:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-stability.R:12:3'): stabpath returns a coherent matrix path ──── Error in `get(name, envir = envir)`: object 'glmnet' not found Backtrace: ▆ 1. └─c060::stabpath(y = y, x = x, steps = 20L, weakness = 1, family = "binomial") at test-stability.R:12:3 2. └─parallel::clusterExport(cl, c("glmnet", "drop0")) 3. ├─parallel::clusterCall(cl, gets, name, get(name, envir = envir)) 4. │ └─parallel:::sendCall(cl[[i]], fun, list(...)) 5. │ └─parallel:::postNode(...) 6. │ ├─parallel::sendData(con, list(type = type, data = value, tag = tag)) 7. │ └─parallel:::sendData.SOCKnode(...) 8. │ └─base::serialize(data, node$con) 9. └─base::get(name, envir = envir) ── Error ('test-stability.R:28:3'): stabsel selects variables at or above threshold (may be empty) ── Error in `get(name, envir = envir)`: object 'glmnet' not found Backtrace: ▆ 1. └─c060::stabpath(y = y, x = x, steps = 20L, weakness = 1, family = "binomial") at test-stability.R:28:3 2. └─parallel::clusterExport(cl, c("glmnet", "drop0")) 3. ├─parallel::clusterCall(cl, gets, name, get(name, envir = envir)) 4. │ └─parallel:::sendCall(cl[[i]], fun, list(...)) 5. │ └─parallel:::postNode(...) 6. │ ├─parallel::sendData(con, list(type = type, data = value, tag = tag)) 7. │ └─parallel:::sendData.SOCKnode(...) 8. │ └─base::serialize(data, node$con) 9. └─base::get(name, envir = envir) [ FAIL 2 | WARN 0 | SKIP 2 | PASS 38 ] Error: Test failures In addition: Warning messages: 1: In for (i in seq_len(n)) { : closing unused connection 8 (<-CRANwin3.fb05.statistik.uni-dortmund.de:11354) 2: In for (i in seq_len(n)) { : closing unused connection 7 (<-CRANwin3.fb05.statistik.uni-dortmund.de:11354) 3: In for (i in seq_len(n)) { : closing unused connection 6 (<-CRANwin3.fb05.statistik.uni-dortmund.de:11354) 4: In for (i in seq_len(n)) { : closing unused connection 5 (<-CRANwin3.fb05.statistik.uni-dortmund.de:11354) Execution halted * checking PDF version of manual ... [21s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 1 NOTE