context("survival-pyears") skip_on_cran() skip_if_not_installed("modeltests") library(modeltests) skip_if_not_installed("survival") library(survival) temp.yr <- tcut(mgus$dxyr, 55:92, labels = as.character(55:91)) temp.age <- tcut(mgus$age, 34:101, labels = as.character(34:100)) ptime <- ifelse(is.na(mgus$pctime), mgus$futime, mgus$pctime) pstat <- ifelse(is.na(mgus$pctime), 0, 1) fit <- pyears( Surv(ptime / 365.25, pstat) ~ temp.yr + temp.age + sex, mgus, data.frame = TRUE ) fit2 <- pyears( Surv(ptime / 365.25, pstat) ~ temp.yr + temp.age + sex, mgus, data.frame = FALSE ) test_that("pyears tidier arguments", { check_arguments(tidy.pyears) check_arguments(glance.pyears) }) test_that("tidy.pyears", { td <- tidy(fit) td2 <- tidy(fit2) check_tidy_output(td, strict = FALSE) check_tidy_output(td2, strict = FALSE) }) test_that("glance.pyears", { gl <- glance(fit) gl2 <- glance(fit2) check_glance_outputs(gl, gl2) })