Package check result: NOTE Check: CRAN incoming feasibility, Result: NOTE Maintainer: ‘Emil Hvitfeldt ’ New maintainer: Emil Hvitfeldt Old maintainer(s): Simon Couch Changes to worse in reverse depends: Package: autostats Check: examples New result: ERROR Running examples in ‘autostats-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: auto_variable_contributions > ### Title: Plot Variable Contributions > ### Aliases: auto_variable_contributions > > ### ** Examples > > > iris %>% + framecleaner::create_dummies() %>% + auto_variable_contributions( + tidy_formula(., target = Petal.Width) + ) 1 column(s) have become 3 dummy columns Error in if (validate & xgb_obj != "multi:softprob") { : argument is of length zero Calls: %>% -> auto_variable_contributions Execution halted Package: autostats Check: re-building of vignette outputs New result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘autostats.Rmd’ using rmarkdown Quitting from autostats.Rmd:40-43 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `if (validate & xgb_obj != "multi:softprob") ...`: ! argument is of length zero --- Backtrace: ▆ 1. ├─iris %>% auto_variable_contributions(species_formula) 2. ├─autostats::auto_variable_contributions(., species_formula) 3. │ ├─base::suppressWarnings(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─data %>% tidy_xgboost(formula, validate = FALSE) 6. └─autostats::tidy_xgboost(., formula, validate = FALSE) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'autostats.Rmd' failed with diagnostics: argument is of length zero --- failed re-building ‘autostats.Rmd’ --- re-building ‘tidyXgboost.Rmd’ using rmarkdown Quitting from tidyXgboost.Rmd:78-89 [unnamed-chunk-4] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `xgb$feature_names <- nms`: ! ALTLIST classes must provide a Set_elt method [class: XGBAltrepPointerClass, pkg: xgboost] --- Backtrace: ▆ 1. ├─xgb_tuned_fit_grid %>% visualize_model() 2. ├─autostats::visualize_model(.) 3. └─autostats:::visualize_model.xgb.Booster(.) 4. └─autostats:::plot_varimp_xgboost(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tidyXgboost.Rmd' failed with diagnostics: ALTLIST classes must provide a Set_elt method [class: XGBAltrepPointerClass, pkg: xgboost] --- failed re-building ‘tidyXgboost.Rmd’ SUMMARY: processing the following files failed: ‘autostats.Rmd’ ‘tidyXgboost.Rmd’ Error: Vignette re-building failed. Execution halted Package: didimputation Check: whether package can be installed New result: WARNING Found the following significant warnings: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include/RcppArmadillo/version/arma.h:66:199: note: ‘#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT and also removing C++11 compilation directive. See GitHub issue #475 for more.’ See ‘/home/hornik/tmp/CRAN_recheck/didimputation.Rcheck/00install.out’ for details. Used C++ compiler: ‘g++-15 (Debian 15.2.0-9) 15.2.0’ Package: germinationmetrics Check: re-building of vignette outputs New result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘Introduction.Rmd’ using rmarkdown_notangle Quitting from Introduction.Rmd:132-165 [unnamed-chunk-7] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `curl::curl_fetch_memory()`: ! Timeout was reached [cran.r-project.org]: Connection timed out after 10001 milliseconds --- Backtrace: x 1. +-httr::GET(link) 2. | \-httr:::request_perform(req, hu$handle$handle) 3. | +-httr:::request_fetch(req$output, req$url, handle) 4. | \-httr:::request_fetch.write_memory(req$output, req$url, handle) 5. | \-curl::curl_fetch_memory(url, handle = handle) 6. \-curl:::raise_libcurl_error(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Introduction.Rmd' failed with diagnostics: Timeout was reached [cran.r-project.org]: Connection timed out after 10001 milliseconds --- failed re-building ‘Introduction.Rmd’ SUMMARY: processing the following file failed: ‘Introduction.Rmd’ Error: Vignette re-building failed. Execution halted Package: radiant.model Check: examples New result: ERROR Running examples in ‘radiant.model-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: gbt > ### Title: Gradient Boosted Trees using XGBoost > ### Aliases: gbt > > ### ** Examples > > ## Not run: > ##D gbt(titanic, "survived", c("pclass", "sex"), lev = "Yes") %>% summary() > ##D gbt(titanic, "survived", c("pclass", "sex")) %>% str() > ## End(Not run) > gbt( + titanic, "survived", c("pclass", "sex"), lev = "Yes", + early_stopping_rounds = 0, nthread = 1 + ) %>% summary() Warning in throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'data' has been renamed to 'x'. This warning will become an error in a future version. Warning in throw_err_or_depr_msg("Parameter '", match_old, "' has been renamed to '", : Parameter 'label' has been renamed to 'y'. This warning will become an error in a future version. Error in process.y.margin.and.objective(y, base_margin, objective, params) : Got numeric 'y' - supported objectives for this data are: reg:squarederror, reg:squaredlogerror, reg:logistic, reg:pseudohubererror, reg:absoluteerror, reg:quantileerror, count:poisson, reg:gamma, reg:tweedie. Was passed: binary:logistic Calls: %>% ... do.call -> -> process.y.margin.and.objective Execution halted