Package: bonsaiforest
Check: tests
New result: ERROR
    Running ‘testthat.R’ [37s/31s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > # This file is part of the standard setup for testthat.
    > # It is recommended that you do not modify it.
    > #
    > # Where should you do additional test configuration?
    > # Learn more about the roles of various files in:
    > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
    > # * https://testthat.r-lib.org/articles/special-files.html
    > 
    > library(testthat)
    > library(bonsaiforest)
    
    Attaching package: 'bonsaiforest'
    
    The following object is masked from 'package:testthat':
    
        compare
    
    > 
    > test_check("bonsaiforest")
    [ FAIL 1 | WARN 3 | SKIP 12 | PASS 68 ]
    
    ══ Skipped tests (12) ══════════════════════════════════════════════════════════
    • On CRAN (12): 'test-horseshoe.R:58:3', 'test-plot.R:3:3', 'test-plot.R:8:3',
      'test-plot.R:13:3', 'test-plot.R:18:3', 'test-print.R:3:3',
      'test-print.R:8:3', 'test-print.R:13:3', 'test-print.R:18:3',
      'test-simulation.R:16:3', 'test-simulation.R:23:3', 'test-simulation.R:30:3'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-horseshoe.R:2:3'): horseshoe outputs the right elements for survival ──
    Error in `brms::brmsfamily("cox", bhaz = bhaz)`: unused argument (bhaz = bhaz)
    Backtrace:
        ▆
     1. ├─base::suppressWarnings(...) at test-horseshoe.R:2:3
     2. │ └─base::withCallingHandlers(...)
     3. └─bonsaiforest::horseshoe(...)
    
    [ FAIL 1 | WARN 3 | SKIP 12 | PASS 68 ]
    Error: Test failures
    Execution halted

Package: broom.mixed
Check: tests
New result: ERROR
    Running ‘test-all.R’ [37s/37s]
  Running the tests in ‘tests/test-all.R’ failed.
  Complete output:
    > Sys.setenv("R_TESTS" = "")
    > library(testthat)
    > test_check("broom.mixed")
    Loading required package: broom.mixed
    GAMLSS-RS iteration 1: Global Deviance = 4771.925 
    GAMLSS-CG iteration 1: Global Deviance = 4771.013 
    GAMLSS-CG iteration 2: Global Deviance = 4770.994 
    GAMLSS-CG iteration 3: Global Deviance = 4770.994 
    [ FAIL 1 | WARN 5 | SKIP 1 | PASS 237 ]
    
    ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
    • On CRAN (1): 'test-rstanarm.R:35:5'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-alltibbles.R:57:21'): (code run outside of `test_that()`) ──────
    Error in `.requirePackage(package)`: unable to find required package 'rstan'
    Backtrace:
         ▆
      1. └─broom.mixed (local) testf("glance", z) at test-alltibbles.R:62:13
      2.   ├─testthat::expect_is(get(fn_str)(obj), "tbl_df") at test-alltibbles.R:57:21
      3.   │ └─testthat::quasi_label(enquo(object), label, arg = "object")
      4.   │   └─rlang::eval_bare(expr, quo_get_env(quo))
      5.   ├─get(fn_str)(obj)
      6.   └─broom.mixed:::glance.brmsfit(obj)
      7.     └─broom.mixed:::glance_stan(...)
      8.       ├─stats::sigma(x)
      9.       └─broom.mixed:::sigma.brmsfit(x)
     10.         ├─"sigma" %in% brms::variables(object)
     11.         ├─brms::variables(object)
     12.         └─brms:::variables.brmsfit(object)
     13.           └─methods (local) dimnames(x$fit)
     14.             └─methods (local) `<fn>`(`<list>`, `<stndrdGn>`, `<env>`)
     15.               └─methods:::.findInheritedMethods(classes, fdef, mtable)
     16.                 └─methods::getClass(cl1, where = where, .Force = TRUE)
     17.                   └─methods::getClassDef(Class, where)
     18.                     └─methods:::.requirePackage(package)
    
    [ FAIL 1 | WARN 5 | SKIP 1 | PASS 237 ]
    Error: Test failures
    Execution halted

Package: pollimetry
Check: examples
New result: ERROR
  Running examples in ‘pollimetry-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: bodysize
  > ### Title: Converts the intertegular distance (IT) and co-variates to body
  > ###   size in dry weight (mg) for bees or hoverflies.
  > ### Aliases: bodysize
  > 
  > ### ** Examples
  > 
  > example=cbind.data.frame(IT=c(1.3,2.3),
  +                          Sex=c("Female","Male"), 
  +                          Subfamily=c("Syrphinae","Eristalinae"),
  +                          Region=c("Australasia","Europe"),
  +                          Species=c("Sphaerophoria_macrogaster","Myathropa_florea"))
  > bodysize(x=example,taxa="hov",type="taxo")
  Loading required namespace: pollimetrydata
  Failed with error:  ‘there is no package called ‘pollimetrydata’’
  Downloading data from: https://github.com/liamkendall/pollimetrydata/raw/master/data/hov_tax_mod.rdata 
  
  SHA-1 hash of the downloaded data file is:
  8fabe989dfed6c91d8e5834ad224ff4865b76b7f
  Loading required package: rstan
  Loading required package: StanHeaders
  Error: package or namespace load failed for ‘rstan’ in .doLoadActions(where, attach):
   error in load action .__A__.1 for package rstan: Rcpp::loadModule(module = "class_model_base", what = TRUE, env = ns, : Unable to load module "class_model_base": attempt to apply non-function
  Error in .requirePackage(package) : 
    unable to find required package ‘rstan’
  Calls: bodysize ... .findInheritedMethods -> getClass -> getClassDef -> .requirePackage
  Execution halted