* using log directory ‘/srv/hornik/tmp/CRAN_pretest/brms.Rcheck’
* using R Under development (unstable) (2024-09-18 r87177)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.8 (9)
    Debian flang-new version 18.1.8 (9)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘brms/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘brms’ version ‘2.22.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [7s/9s] NOTE
Maintainer: ‘Paul-Christian Bürkner <paul.buerkner@gmail.com>’

Suggests or Enhances not in mainstream repositories:
  cmdstanr
Availability using Additional_repositories specification:
  cmdstanr   yes   https://stan-dev.r-universe.dev/

Found the following (possibly) invalid URLs:
  URL: https://arxiv.org/pdf/1609.00046.pdf (moved to http://arxiv.org/pdf/1609.00046)
    From: man/R2D2.Rd
    Status: 301
    Message: Moved Permanently
  URL: https://arxiv.org/pdf/1610.05559v1.pdf (moved to http://arxiv.org/pdf/1610.05559v1)
    From: man/horseshoe.Rd
    Status: 301
    Message: Moved Permanently
  URL: https://arxiv.org/pdf/2208.07132.pdf (moved to http://arxiv.org/pdf/2208.07132)
    From: man/R2D2.Rd
    Status: 301
    Message: Moved Permanently
  URL: https://paul-buerkner.github.io/brms/ (moved to http://paulbuerkner.com/brms/)
    From: DESCRIPTION
          README.md
    Status: 301
    Message: Moved Permanently
  URL: https://paul-buerkner.github.io/software/brms-blogposts.html (moved to http://paulbuerkner.com/software/brms-blogposts.html)
    From: README.md
    Status: 301
    Message: Moved Permanently
For content that is 'Moved Permanently', please change http to https,
add trailing slashes, or replace the old by the new URL.

Size of tarball: 5558612 bytes
* checking package namespace information ... OK
* checking package dependencies ... INFO
Package suggested but not available for checking: ‘cmdstanr’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘brms’ can be installed ... [26s/26s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s/2s] OK
* checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the package can be unloaded cleanly ... [2s/2s] OK
* checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
* checking loading without being on the library search path ... [2s/2s] OK
* checking whether startup messages can be suppressed ... [2s/2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [52s/50s] OK
* checking Rd files ... [1s/1s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  conditional_effects.brmsfit.Rd: geom_jitter, geom_rug, geom_smooth,
    geom_point, geom_errorbar, geom_contour, geom_raster, facet_wrap,
    scale_colour_grey, scale_colour_gradient, ggplot
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking sizes of PDF files under ‘inst/doc’ ... WARNING
  ‘gs+qpdf’ made some significant size reductions:
     compacted ‘brms_multilevel.pdf’ from 607Kb to 277Kb
     compacted ‘brms_overview.pdf’ from 1157Kb to 743Kb
  consider running tools::compactPDF(gs_quality = "ebook") on these files,
  or build the source package with --compact-vignettes=both
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [21s/21s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [55s/55s] OK
  Running ‘testthat.R’ [55s/55s]
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [31s/31s] OK
* checking PDF version of manual ... [9s/9s] OK
* checking HTML version of manual ... [5s/5s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 WARNING, 2 NOTEs