R Under development (unstable) (2025-02-25 r87824 ucrt) -- "Unsuffered Consequences"
Copyright (C) 2025 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(blit)
> 
> test_check("blit")
Running command: d:\rtools44\usr\bin\perl.exe --help

Der Befehl "D:\temp\2025_02_26_09_40_17_29543\RtmpGM9RLf\blit24a20202fefe" ist entweder falsch geschrieben oder

konnte nicht gefunden werden.

Running command: d:\rtools44\usr\bin\gzip.exe -c
D:\temp\2025_02_26_09_40_17_29543\RtmpGM9RLf\file24a206eda7027 |
d:\rtools44\usr\bin\gzip.exe -d >
D:\temp\2025_02_26_09_40_17_29543\RtmpGM9RLf\file24a2068303772

Der Befehl "D:\temp\2025_02_26_09_40_17_29543\RtmpGM9RLf\blit24a2062071dec" ist entweder falsch geschrieben oder

konnte nicht gefunden werden.

[ FAIL 1 | WARN 2 | SKIP 11 | PASS 9 ]

══ Skipped tests (11) ══════════════════════════════════════════════════════════
• .Platform$OS.type == "windows" is TRUE (1): 'test-utils.R:20:5'
• empty test (1): 'test-exec.R:35:1'
• nzchar(Sys.which("alleleCounter")) is not TRUE (1): 'test-exec.R:2:5'
• nzchar(Sys.which("cellranger")) is not TRUE (1): 'test-exec.R:7:5'
• nzchar(Sys.which("fastq_pair")) is not TRUE (1): 'test-exec.R:12:5'
• nzchar(Sys.which("gistic2")) is not TRUE (1): 'test-exec.R:17:5'
• nzchar(Sys.which("kraken2")) is not TRUE (1): 'test-exec.R:31:5'
• nzchar(Sys.which("python2")) || nzchar(Sys.which("python3")) is not TRUE (2):
  'test-exec.R:22:5', 'test-exec.R:41:5'
• nzchar(Sys.which("run-trust4")) is not TRUE (1): 'test-exec.R:53:5'
• nzchar(Sys.which("seqkit")) is not TRUE (1): 'test-exec.R:48:5'

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-exec.R:67:5'): `pipe()` method works well ──────────────────────
Error in `file(con, "rb")`: cannot open the connection
Backtrace:
    ▆
 1. ├─testthat::expect_identical(read_lines(file), read_lines(file2)) at test-exec.R:67:5
 2. │ └─testthat::quasi_label(enquo(expected), expected.label, arg = "expected")
 3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
 4. └─blit:::read_lines(file2)
 5.   └─blit:::is_gzip_signature(file)
 6.     └─blit:::match_file_signature(...)
 7.       ├─file_signature %||% readBin(file, raw(), n)
 8.       └─base::readBin(file, raw(), n)
 9.         └─base::file(con, "rb")

[ FAIL 1 | WARN 2 | SKIP 11 | PASS 9 ]
> 
> proc.time()
   user  system elapsed 
   0.75    0.23    1.03