* using log directory ‘/srv/hornik/tmp/CRAN_pretest/birdnetR.Rcheck’ * using R Under development (unstable) (2025-04-08 r88126) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (1+b1) Debian flang-new version 19.1.7 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘birdnetR/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘birdnetR’ version ‘0.2.3’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/5s] NOTE Maintainer: ‘Felix Günther ’ New submission Possibly misspelled words in DESCRIPTION: Eibl (13:28) Kahl (13:5) Klinck (13:40) bioacoustic (11:13) pre (11:82) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘birdnetR’ can be installed ... [4s/4s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] NOTE /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip Warning in system2(python, args, stdout = TRUE) : running command ''/tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python' -m pip freeze' had status 1 A namespace must be able to be loaded with just the base namespace loaded: otherwise if the namespace gets loaded by a saved object, the session will be unable to start. Probably some imports need to be declared in the NAMESPACE file. * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking whether startup messages can be suppressed ... [1s/1s] NOTE /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip It looks like this package (or a package it requires) has a startup message which cannot be suppressed: see ?packageStartupMessage. * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip * checking S3 generic/method consistency ... WARNING /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip See section ‘Generic functions and methods’ in the ‘Writing R Extensions’ manual. * checking replacement functions ... WARNING /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip The argument of a replacement function which corresponds to the right hand side must be named ‘value’. * checking foreign function calls ... NOTE /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip See chapter ‘System and foreign language interfaces’ in the ‘Writing R Extensions’ manual. * checking R code for possible problems ... [6s/6s] NOTE /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... WARNING /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip All user-level objects in a package should have documentation entries. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. * checking for code/documentation mismatches ... WARNING /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip * checking Rd \usage sections ... NOTE /tmp/check-CRAN-incoming-hornik/.virtualenvs/r-reticulate/bin/python: No module named pip The \usage entries for S3 methods should use the \method markup and not their full name. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [3s/3s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [2s/2s] OK Running ‘testthat.R’ [2s/2s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [2s/2s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 4 WARNINGs, 7 NOTEs