* using log directory 'd:/RCompile/CRANincoming/R-devel/bioRad.Rcheck' * using R Under development (unstable) (2023-07-07 r84657 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.2.0 GNU Fortran (GCC) 12.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'bioRad/DESCRIPTION' ... OK * this is package 'bioRad' version '0.7.0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [12s] NOTE Maintainer: 'Adriaan M. Dokter ' New submission Package was archived on CRAN Unknown, possibly misspelled, fields in DESCRIPTION: 'Remotes' CRAN repository db overrides: X-CRAN-Comment: Archived on 2023-07-07 as issues were not corrected in time. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Found the following (possibly) invalid URLs: URL: https://adokter.github.io/bioRad/articles/bioRad.html (moved to https://adriaandokter.com/bioRad/articles/bioRad.html) From: man/bioRad-package.Rd Status: 301 Message: Moved Permanently URL: https://adokter.github.io/bioRad/reference/index.html (moved to https://adriaandokter.com/bioRad/reference/index.html) From: man/bioRad-package.Rd Status: 301 Message: Moved Permanently URL: https://www.rstudio.com/ (moved to https://posit.co/) From: inst/doc/rad_aero_22.html Status: 301 Message: Moved Permanently * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'bioRad' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [23s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [112s] NOTE Examples with CPU (user + system) or elapsed time > 10s user system elapsed integrate_to_ppi 27.25 1.64 28.93 composite_ppi 11.74 0.76 12.50 * checking for unstated dependencies in 'tests' ... OK * checking tests ... [176s] OK Running 'testthat.R' [176s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [66s] OK * checking PDF version of manual ... [27s] OK * checking HTML version of manual ... [17s] OK * DONE Status: 2 NOTEs