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Type 'q()' to quit R. > library(testthat) > library(bigergm) Loading required package: ergm Loading required package: network 'network' 1.18.2 (2023-12-04), part of the Statnet Project * 'news(package="network")' for changes since last version * 'citation("network")' for citation information * 'https://statnet.org' for help, support, and other information 'ergm' 4.6.0 (2023-12-17), part of the Statnet Project * 'news(package="ergm")' for changes since last version * 'citation("ergm")' for citation information * 'https://statnet.org' for help, support, and other information 'ergm' 4 is a major update that introduces some backwards-incompatible changes. Please type 'news(package="ergm")' for a list of major changes. Loading required package: Rcpp > > test_check("bigergm") Compute pi for pi_s0v0w0 [1] 1 Compute pi for pi_s1v0w0 [1] 2 Compute pi for pi_s0v1w0 [1] 3 Compute pi for pi_s1v1w0 [1] 4 Compute pi for pi_s0v0w1 [1] 5 Compute pi for pi_s1v0w1 [1] 6 Compute pi for pi_s0v1w1 [1] 7 Compute pi for pi_s1v1w1 [1] 8 Compute pi for pi_s0v0w0 [1] 1 Compute pi for pi_s1v0w0 [1] 2 Compute pi for pi_s0v1w0 [1] 3 Compute pi for pi_s1v1w0 [1] 4 Compute pi for pi_s0v0w1 [1] 5 Compute pi for pi_s1v0w1 [1] 6 Compute pi for pi_s0v1w1 [1] 7 Compute pi for pi_s1v1w1 [1] 8 Compute pi for pi_s0v0w0 [1] 1 Compute pi for pi_s1v0w0 [1] 2 Compute pi for pi_s0v1w0 [1] 3 Compute pi for pi_s1v1w0 [1] 4 Compute pi for pi_s0v0w1 [1] 5 Compute pi for pi_s1v0w1 [1] 6 Compute pi for pi_s0v1w1 [1] 7 Compute pi for pi_s1v1w1 [1] 8 edges nodematch('x') nodematch('y') triangle kstar(2) -3.00 1.00 1.00 0.76 0.08 edges nodematch('x') nodematch('y') -5 2 2 edges nodematch('x') nodematch('y') triangle kstar(2) -3.00 1.00 1.00 0.76 0.08 edges nodematch('x') nodematch('y') -5 2 2 [ FAIL 13 | WARN 2 | SKIP 0 | PASS 126 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-cache.R:60:3'): Estimation with a disk cache stores data in the correct directory ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm::hergm(...) at test-cache.R:60:3 2. └─bigergm:::MM_wrapper(...) 3. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-gof.R:57:3'): Returned GOF dataframe has the correct fields ──── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm (local) get_dummy_net(50, 2) at test-gof.R:57:3 2. └─bigergm::hergm(...) at test-gof.R:35:3 3. └─bigergm:::MM_wrapper(...) 4. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-gof.R:82:3'): GOF network stats have the right fields and terms ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm (local) get_dummy_net(50, 2) at test-gof.R:82:3 2. └─bigergm::hergm(...) at test-gof.R:35:3 3. └─bigergm:::MM_wrapper(...) 4. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-gof.R:121:3'): GOF degree stats have the right fields and terms ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm (local) get_dummy_net(50, 2) at test-gof.R:121:3 2. └─bigergm::hergm(...) at test-gof.R:35:3 3. └─bigergm:::MM_wrapper(...) 4. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-gof.R:153:3'): GOF esp stats have the right fields and terms ─── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm (local) get_dummy_net(50, 2) at test-gof.R:153:3 2. └─bigergm::hergm(...) at test-gof.R:35:3 3. └─bigergm:::MM_wrapper(...) 4. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-gof.R:184:3'): GOF geodesic distance is returned when requested ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm (local) get_dummy_net(50, 2) at test-gof.R:184:3 2. └─bigergm::hergm(...) at test-gof.R:35:3 3. └─bigergm:::MM_wrapper(...) 4. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-gof.R:219:3'): Return GOF statistics including only within-block connections ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm (local) get_dummy_net(50, 2) at test-gof.R:219:3 2. └─bigergm::hergm(...) at test-gof.R:35:3 3. └─bigergm:::MM_wrapper(...) 4. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-gof.R:259:3'): Within-connections GOF can be started from the observed network ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm (local) get_dummy_net(100, 4) at test-gof.R:259:3 2. └─bigergm::hergm(...) at test-gof.R:35:3 3. └─bigergm:::MM_wrapper(...) 4. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-gof.R:289:3'): Full GOF can be started from the observed network ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm (local) get_dummy_net(100, 4) at test-gof.R:289:3 2. └─bigergm::hergm(...) at test-gof.R:35:3 3. └─bigergm:::MM_wrapper(...) 4. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-include-covariates.R:21:3'): Check if algorithm automatically checks if covariates are specified ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test-include-covariates.R:21:3 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─bigergm::hergm(...) 7. └─bigergm:::MM_wrapper(...) 8. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-simulate_hergm.R:545:3'): Setting output = 'edgelist' returns a single edgelist for the full simulated network ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm::hergm(...) at test-simulate_hergm.R:545:3 2. └─bigergm:::MM_wrapper(...) 3. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-simulate_hergm.R:602:3'): Setting output = 'edgelist' returns a list of full-network edgelists ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. └─bigergm::hergm(...) at test-simulate_hergm.R:602:3 2. └─bigergm:::MM_wrapper(...) 3. └─reticulate::use_virtualenv(virtualenv_python) ── Error ('test-unique-names.R:24:3'): Check if algorithm works even if vertex.names are nonunique ── Error in `reticulate::use_virtualenv(virtualenv_python)`: Directory ~/.virtualenvs/r-bigergm is not a Python virtualenv Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test-unique-names.R:24:3 2. │ └─testthat:::quasi_capture(...) 3. │ ├─testthat (local) .capture(...) 4. │ │ └─base::withCallingHandlers(...) 5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 6. └─bigergm::hergm(...) 7. └─bigergm:::MM_wrapper(...) 8. └─reticulate::use_virtualenv(virtualenv_python) [ FAIL 13 | WARN 2 | SKIP 0 | PASS 126 ] Error: Test failures Execution halted