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17.10.2026    08:03        <dir> fixtures
17.10.2026    08:03         1055 helper-avian-skeleton.R
17.10.2026    08:03         3618 helper-example-data.R
17.10.2026    08:03         9614 helper-search-characterization.R
17.10.2026    08:03          430 helper-simulation-rng.R
17.10.2026    08:03          469 helper-simulation-study-formula.R
17.10.2026    08:03          855 helper-test-overrides.R
17.10.2026    08:03         3591 test-addShiftToModel.R
17.10.2026    08:03         3380 test-compare-simulation-generators.R
17.10.2026    08:03         1625 test-covariance-validation-scale.R
17.10.2026    08:03        14856 test-createSimulationTemplate.R
17.10.2026    08:03        16243 test-evaluateShiftRecovery.R
17.10.2026    08:03        23188 test-example-data.R
17.10.2026    08:03         4608 test-extractRegimeVCVs.R
17.10.2026    08:03         8182 test-fitMvglsAndExtractIC.formula.R
17.10.2026    08:03         2416 test-formula-intercept.R
17.10.2026    08:03         4244 test-generatePaintedTrees.R
17.10.2026    08:03         6076 test-generateViridisColorScale.R
17.10.2026    08:03         3155 test-getDescendants.R
17.10.2026    08:03        20590 test-icTrajectory.R
17.10.2026    08:03        21512 test-lineage_rates.R
17.10.2026    08:03         4062 test-mvgls-functions.R
17.10.2026    08:03         8390 test-mvgls-starts.R
17.10.2026    08:03         9235 test-normalizeMvglsFormulaCall.R
17.10.2026    08:03        10439 test-paintSubTree_mod.R
17.10.2026    08:03         3909 test-paintSubTree_removeShift.R
17.10.2026    08:03        20159 test-paired-tuning-cache.R
17.10.2026    08:03         4205 test-paired-tuning-grid.R
17.10.2026    08:03        11820 test-print-bifrost_search.R
17.10.2026    08:03         4672 test-print-bifrost_simulation_study.R
17.10.2026    08:03         2717 test-print-bifrost_simulation_template.R
17.10.2026    08:03        67696 test-rate-map.R
17.10.2026    08:03         3254 test-recovery-f1.R
17.10.2026    08:03        78503 test-regime-integration.R
17.10.2026    08:03         3770 test-removeShiftFromTree.R
17.10.2026    08:03        12734 test-replicate-metrics.R
17.10.2026    08:03        25766 test-runFalsePositiveSimulationStudy.R
17.10.2026    08:03        31985 test-runSearchTuningGrid.R
17.10.2026    08:03        39010 test-runShiftRecoverySimulationStudy.R
17.10.2026    08:03         6988 test-search-background-history.R
17.10.2026    08:03         9107 test-search-baseline-output.R
17.10.2026    08:03          735 test-search-characterization.R
17.10.2026    08:03         2529 test-search-progress-atomic.R
17.10.2026    08:03         1821 test-search-progress-equivalence.R
17.10.2026    08:03         3629 test-search-progress-rng.R
17.10.2026    08:03         2286 test-search-progress-silent.R
17.10.2026    08:03        46800 test-search-progress.R
17.10.2026    08:03         2205 test-search-spinner.R
17.10.2026    08:03         8531 test-search-threading.R
17.10.2026    08:03        59894 test-searchOptimalConfiguration.R
17.10.2026    08:03        13194 test-selectTunedSearchParameters.R
17.10.2026    08:03         1632 test-serialized-artifacts.R
17.10.2026    08:03        71667 test-shift-distributions.R
17.10.2026    08:03         9813 test-simulateNullDataset.R
17.10.2026    08:03        22114 test-simulateShiftedDataset.R
17.10.2026    08:03         5875 test-simulation-covariance-helpers.R
17.10.2026    08:03        11256 test-simulation-formula-spec.R
17.10.2026    08:03         6818 test-simulation-helpers.R
17.10.2026    08:03         2132 test-simulation-terminology.R
17.10.2026    08:03        31394 test-simulation-vignette-cache.R
17.10.2026    08:03         1873 test-tuning-fitting-settings.R
17.10.2026    08:03         2253 test-vignette-html-widgets.R
17.10.2026    08:03         3418 test-whichShifts.R