R Under development (unstable) (2023-07-06 r84647 ucrt) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(beanz) Loading required package: Rcpp > > test_check("beanz") SAMPLING FOR MODEL 'sr' NOW (CHAIN 1). Chain 1: Chain 1: Gradient evaluation took 0.00016 seconds Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 1.6 seconds. Chain 1: Adjust your expectations accordingly! Chain 1: Chain 1: Chain 1: WARNING: There aren't enough warmup iterations to fit the Chain 1: three stages of adaptation as currently configured. Chain 1: Reducing each adaptation stage to 15%/75%/10% of Chain 1: the given number of warmup iterations: Chain 1: init_buffer = 3 Chain 1: adapt_window = 15 Chain 1: term_buffer = 2 Chain 1: Chain 1: Iteration: 1 / 40 [ 2%] (Warmup) Chain 1: Iteration: 4 / 40 [ 10%] (Warmup) Chain 1: Iteration: 8 / 40 [ 20%] (Warmup) Chain 1: Iteration: 12 / 40 [ 30%] (Warmup) Chain 1: Iteration: 16 / 40 [ 40%] (Warmup) Chain 1: Iteration: 20 / 40 [ 50%] (Warmup) Chain 1: Iteration: 21 / 40 [ 52%] (Sampling) Chain 1: Iteration: 24 / 40 [ 60%] (Sampling) Chain 1: Iteration: 28 / 40 [ 70%] (Sampling) Chain 1: Iteration: 32 / 40 [ 80%] (Sampling) Chain 1: Iteration: 36 / 40 [ 90%] (Sampling) Chain 1: Iteration: 40 / 40 [100%] (Sampling) Chain 1: Chain 1: Elapsed Time: 0.06 seconds (Warm-up) Chain 1: 0.046 seconds (Sampling) Chain 1: 0.106 seconds (Total) Chain 1: SAMPLING FOR MODEL 'sr' NOW (CHAIN 2). Chain 2: Chain 2: Gradient evaluation took 2.1e-05 seconds Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.21 seconds. Chain 2: Adjust your expectations accordingly! Chain 2: Chain 2: Chain 2: WARNING: There aren't enough warmup iterations to fit the Chain 2: three stages of adaptation as currently configured. Chain 2: Reducing each adaptation stage to 15%/75%/10% of Chain 2: the given number of warmup iterations: Chain 2: init_buffer = 3 Chain 2: adapt_window = 15 Chain 2: term_buffer = 2 Chain 2: Chain 2: Iteration: 1 / 40 [ 2%] (Warmup) Chain 2: Iteration: 4 / 40 [ 10%] (Warmup) Chain 2: Iteration: 8 / 40 [ 20%] (Warmup) Chain 2: Iteration: 12 / 40 [ 30%] (Warmup) Chain 2: Iteration: 16 / 40 [ 40%] (Warmup) Chain 2: Iteration: 20 / 40 [ 50%] (Warmup) Chain 2: Iteration: 21 / 40 [ 52%] (Sampling) Chain 2: Iteration: 24 / 40 [ 60%] (Sampling) Chain 2: Iteration: 28 / 40 [ 70%] (Sampling) Chain 2: Iteration: 32 / 40 [ 80%] (Sampling) Chain 2: Iteration: 36 / 40 [ 90%] (Sampling) Chain 2: Iteration: 40 / 40 [100%] (Sampling) Chain 2: Chain 2: Elapsed Time: 0.049 seconds (Warm-up) Chain 2: 0.045 seconds (Sampling) Chain 2: 0.094 seconds (Total) Chain 2: SAMPLING FOR MODEL 'sr' NOW (CHAIN 3). Chain 3: Chain 3: Gradient evaluation took 2.1e-05 seconds Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.21 seconds. Chain 3: Adjust your expectations accordingly! Chain 3: Chain 3: Chain 3: WARNING: There aren't enough warmup iterations to fit the Chain 3: three stages of adaptation as currently configured. Chain 3: Reducing each adaptation stage to 15%/75%/10% of Chain 3: the given number of warmup iterations: Chain 3: init_buffer = 3 Chain 3: adapt_window = 15 Chain 3: term_buffer = 2 Chain 3: Chain 3: Iteration: 1 / 40 [ 2%] (Warmup) Chain 3: Iteration: 4 / 40 [ 10%] (Warmup) Chain 3: Iteration: 8 / 40 [ 20%] (Warmup) Chain 3: Iteration: 12 / 40 [ 30%] (Warmup) Chain 3: Iteration: 16 / 40 [ 40%] (Warmup) Chain 3: Iteration: 20 / 40 [ 50%] (Warmup) Chain 3: Iteration: 21 / 40 [ 52%] (Sampling) Chain 3: Iteration: 24 / 40 [ 60%] (Sampling) Chain 3: Iteration: 28 / 40 [ 70%] (Sampling) Chain 3: Iteration: 32 / 40 [ 80%] (Sampling) Chain 3: Iteration: 36 / 40 [ 90%] (Sampling) Chain 3: Iteration: 40 / 40 [100%] (Sampling) Chain 3: Chain 3: Elapsed Time: 0.047 seconds (Warm-up) Chain 3: 0.039 seconds (Sampling) Chain 3: 0.086 seconds (Total) Chain 3: SAMPLING FOR MODEL 'sr' NOW (CHAIN 4). Chain 4: Chain 4: Gradient evaluation took 2.1e-05 seconds Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.21 seconds. Chain 4: Adjust your expectations accordingly! Chain 4: Chain 4: Chain 4: WARNING: There aren't enough warmup iterations to fit the Chain 4: three stages of adaptation as currently configured. Chain 4: Reducing each adaptation stage to 15%/75%/10% of Chain 4: the given number of warmup iterations: Chain 4: init_buffer = 3 Chain 4: adapt_window = 15 Chain 4: term_buffer = 2 Chain 4: Chain 4: Iteration: 1 / 40 [ 2%] (Warmup) Chain 4: Iteration: 4 / 40 [ 10%] (Warmup) Chain 4: Iteration: 8 / 40 [ 20%] (Warmup) Chain 4: Iteration: 12 / 40 [ 30%] (Warmup) Chain 4: Iteration: 16 / 40 [ 40%] (Warmup) Chain 4: Iteration: 20 / 40 [ 50%] (Warmup) Chain 4: Iteration: 21 / 40 [ 52%] (Sampling) Chain 4: Iteration: 24 / 40 [ 60%] (Sampling) Chain 4: Iteration: 28 / 40 [ 70%] (Sampling) Chain 4: Iteration: 32 / 40 [ 80%] (Sampling) Chain 4: Iteration: 36 / 40 [ 90%] (Sampling) Chain 4: Iteration: 40 / 40 [100%] (Sampling) Chain 4: Chain 4: Elapsed Time: 0.042 seconds (Warm-up) Chain 4: 0.041 seconds (Sampling) Chain 4: 0.083 seconds (Total) Chain 4: SAMPLING FOR MODEL 'nse' NOW (CHAIN 1). Chain 1: Chain 1: Gradient evaluation took 5.5e-05 seconds Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.55 seconds. Chain 1: Adjust your expectations accordingly! Chain 1: Chain 1: Chain 1: WARNING: There aren't enough warmup iterations to fit the Chain 1: three stages of adaptation as currently configured. Chain 1: Reducing each adaptation stage to 15%/75%/10% of Chain 1: the given number of warmup iterations: Chain 1: init_buffer = 3 Chain 1: adapt_window = 15 Chain 1: term_buffer = 2 Chain 1: Chain 1: Iteration: 1 / 40 [ 2%] (Warmup) Chain 1: Iteration: 4 / 40 [ 10%] (Warmup) Chain 1: Iteration: 8 / 40 [ 20%] (Warmup) Chain 1: Iteration: 12 / 40 [ 30%] (Warmup) Chain 1: Iteration: 16 / 40 [ 40%] (Warmup) Chain 1: Iteration: 20 / 40 [ 50%] (Warmup) Chain 1: Iteration: 21 / 40 [ 52%] (Sampling) Chain 1: Iteration: 24 / 40 [ 60%] (Sampling) Chain 1: Iteration: 28 / 40 [ 70%] (Sampling) Chain 1: Iteration: 32 / 40 [ 80%] (Sampling) Chain 1: Iteration: 36 / 40 [ 90%] (Sampling) Chain 1: Iteration: 40 / 40 [100%] (Sampling) Chain 1: Chain 1: Elapsed Time: 0.03 seconds (Warm-up) Chain 1: 0.039 seconds (Sampling) Chain 1: 0.069 seconds (Total) Chain 1: SAMPLING FOR MODEL 'nse' NOW (CHAIN 2). Chain 2: Chain 2: Gradient evaluation took 1.7e-05 seconds Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.17 seconds. Chain 2: Adjust your expectations accordingly! Chain 2: Chain 2: Chain 2: WARNING: There aren't enough warmup iterations to fit the Chain 2: three stages of adaptation as currently configured. Chain 2: Reducing each adaptation stage to 15%/75%/10% of Chain 2: the given number of warmup iterations: Chain 2: init_buffer = 3 Chain 2: adapt_window = 15 Chain 2: term_buffer = 2 Chain 2: Chain 2: Iteration: 1 / 40 [ 2%] (Warmup) Chain 2: Iteration: 4 / 40 [ 10%] (Warmup) Chain 2: Iteration: 8 / 40 [ 20%] (Warmup) Chain 2: Iteration: 12 / 40 [ 30%] (Warmup) Chain 2: Iteration: 16 / 40 [ 40%] (Warmup) Chain 2: Iteration: 20 / 40 [ 50%] (Warmup) Chain 2: Iteration: 21 / 40 [ 52%] (Sampling) Chain 2: Iteration: 24 / 40 [ 60%] (Sampling) Chain 2: Iteration: 28 / 40 [ 70%] (Sampling) Chain 2: Iteration: 32 / 40 [ 80%] (Sampling) Chain 2: Iteration: 36 / 40 [ 90%] (Sampling) Chain 2: Iteration: 40 / 40 [100%] (Sampling) Chain 2: Chain 2: Elapsed Time: 0.033 seconds (Warm-up) Chain 2: 0.036 seconds (Sampling) Chain 2: 0.069 seconds (Total) Chain 2: SAMPLING FOR MODEL 'nse' NOW (CHAIN 3). Chain 3: Chain 3: Gradient evaluation took 1.6e-05 seconds Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.16 seconds. Chain 3: Adjust your expectations accordingly! Chain 3: Chain 3: Chain 3: WARNING: There aren't enough warmup iterations to fit the Chain 3: three stages of adaptation as currently configured. Chain 3: Reducing each adaptation stage to 15%/75%/10% of Chain 3: the given number of warmup iterations: Chain 3: init_buffer = 3 Chain 3: adapt_window = 15 Chain 3: term_buffer = 2 Chain 3: Chain 3: Iteration: 1 / 40 [ 2%] (Warmup) Chain 3: Iteration: 4 / 40 [ 10%] (Warmup) Chain 3: Iteration: 8 / 40 [ 20%] (Warmup) Chain 3: Iteration: 12 / 40 [ 30%] (Warmup) Chain 3: Iteration: 16 / 40 [ 40%] (Warmup) Chain 3: Iteration: 20 / 40 [ 50%] (Warmup) Chain 3: Iteration: 21 / 40 [ 52%] (Sampling) Chain 3: Iteration: 24 / 40 [ 60%] (Sampling) Chain 3: Iteration: 28 / 40 [ 70%] (Sampling) Chain 3: Iteration: 32 / 40 [ 80%] (Sampling) Chain 3: Iteration: 36 / 40 [ 90%] (Sampling) Chain 3: Iteration: 40 / 40 [100%] (Sampling) Chain 3: Chain 3: Elapsed Time: 0.034 seconds (Warm-up) Chain 3: 0.029 seconds (Sampling) Chain 3: 0.063 seconds (Total) Chain 3: SAMPLING FOR MODEL 'nse' NOW (CHAIN 4). Chain 4: Chain 4: Gradient evaluation took 1.5e-05 seconds Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.15 seconds. Chain 4: Adjust your expectations accordingly! Chain 4: Chain 4: Chain 4: WARNING: There aren't enough warmup iterations to fit the Chain 4: three stages of adaptation as currently configured. Chain 4: Reducing each adaptation stage to 15%/75%/10% of Chain 4: the given number of warmup iterations: Chain 4: init_buffer = 3 Chain 4: adapt_window = 15 Chain 4: term_buffer = 2 Chain 4: Chain 4: Iteration: 1 / 40 [ 2%] (Warmup) Chain 4: Iteration: 4 / 40 [ 10%] (Warmup) Chain 4: Iteration: 8 / 40 [ 20%] (Warmup) Chain 4: Iteration: 12 / 40 [ 30%] (Warmup) Chain 4: Iteration: 16 / 40 [ 40%] (Warmup) Chain 4: Iteration: 20 / 40 [ 50%] (Warmup) Chain 4: Iteration: 21 / 40 [ 52%] (Sampling) Chain 4: Iteration: 24 / 40 [ 60%] (Sampling) Chain 4: Iteration: 28 / 40 [ 70%] (Sampling) Chain 4: Iteration: 32 / 40 [ 80%] (Sampling) Chain 4: Iteration: 36 / 40 [ 90%] (Sampling) Chain 4: Iteration: 40 / 40 [100%] (Sampling) Chain 4: Chain 4: Elapsed Time: 0.032 seconds (Warm-up) Chain 4: 0.034 seconds (Sampling) Chain 4: 0.066 seconds (Total) Chain 4: SAMPLING FOR MODEL 'nse' NOW (CHAIN 1). Chain 1: Chain 1: Gradient evaluation took 3.4e-05 seconds Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.34 seconds. Chain 1: Adjust your expectations accordingly! Chain 1: Chain 1: Chain 1: WARNING: There aren't enough warmup iterations to fit the Chain 1: three stages of adaptation as currently configured. Chain 1: Reducing each adaptation stage to 15%/75%/10% of Chain 1: the given number of warmup iterations: Chain 1: init_buffer = 3 Chain 1: adapt_window = 15 Chain 1: term_buffer = 2 Chain 1: Chain 1: Iteration: 1 / 40 [ 2%] (Warmup) Chain 1: Iteration: 4 / 40 [ 10%] (Warmup) Chain 1: Iteration: 8 / 40 [ 20%] (Warmup) Chain 1: Iteration: 12 / 40 [ 30%] (Warmup) Chain 1: Iteration: 16 / 40 [ 40%] (Warmup) Chain 1: Iteration: 20 / 40 [ 50%] (Warmup) Chain 1: Iteration: 21 / 40 [ 52%] (Sampling) Chain 1: Iteration: 24 / 40 [ 60%] (Sampling) Chain 1: Iteration: 28 / 40 [ 70%] (Sampling) Chain 1: Iteration: 32 / 40 [ 80%] (Sampling) Chain 1: Iteration: 36 / 40 [ 90%] (Sampling) Chain 1: Iteration: 40 / 40 [100%] (Sampling) Chain 1: Chain 1: Elapsed Time: 0.034 seconds (Warm-up) Chain 1: 0.04 seconds (Sampling) Chain 1: 0.074 seconds (Total) Chain 1: SAMPLING FOR MODEL 'nse' NOW (CHAIN 2). Chain 2: Chain 2: Gradient evaluation took 2.6e-05 seconds Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.26 seconds. Chain 2: Adjust your expectations accordingly! Chain 2: Chain 2: Chain 2: WARNING: There aren't enough warmup iterations to fit the Chain 2: three stages of adaptation as currently configured. Chain 2: Reducing each adaptation stage to 15%/75%/10% of Chain 2: the given number of warmup iterations: Chain 2: init_buffer = 3 Chain 2: adapt_window = 15 Chain 2: term_buffer = 2 Chain 2: Chain 2: Iteration: 1 / 40 [ 2%] (Warmup) Chain 2: Iteration: 4 / 40 [ 10%] (Warmup) Chain 2: Iteration: 8 / 40 [ 20%] (Warmup) Chain 2: Iteration: 12 / 40 [ 30%] (Warmup) Chain 2: Iteration: 16 / 40 [ 40%] (Warmup) Chain 2: Iteration: 20 / 40 [ 50%] (Warmup) Chain 2: Iteration: 21 / 40 [ 52%] (Sampling) Chain 2: Iteration: 24 / 40 [ 60%] (Sampling) Chain 2: Iteration: 28 / 40 [ 70%] (Sampling) Chain 2: Iteration: 32 / 40 [ 80%] (Sampling) Chain 2: Iteration: 36 / 40 [ 90%] (Sampling) Chain 2: Iteration: 40 / 40 [100%] (Sampling) Chain 2: Chain 2: Elapsed Time: 0.034 seconds (Warm-up) Chain 2: 0.025 seconds (Sampling) Chain 2: 0.059 seconds (Total) Chain 2: SAMPLING FOR MODEL 'nse' NOW (CHAIN 3). Chain 3: Chain 3: Gradient evaluation took 1.2e-05 seconds Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.12 seconds. Chain 3: Adjust your expectations accordingly! Chain 3: Chain 3: Chain 3: WARNING: There aren't enough warmup iterations to fit the Chain 3: three stages of adaptation as currently configured. Chain 3: Reducing each adaptation stage to 15%/75%/10% of Chain 3: the given number of warmup iterations: Chain 3: init_buffer = 3 Chain 3: adapt_window = 15 Chain 3: term_buffer = 2 Chain 3: Chain 3: Iteration: 1 / 40 [ 2%] (Warmup) Chain 3: Iteration: 4 / 40 [ 10%] (Warmup) Chain 3: Iteration: 8 / 40 [ 20%] (Warmup) Chain 3: Iteration: 12 / 40 [ 30%] (Warmup) Chain 3: Iteration: 16 / 40 [ 40%] (Warmup) Chain 3: Iteration: 20 / 40 [ 50%] (Warmup) Chain 3: Iteration: 21 / 40 [ 52%] (Sampling) Chain 3: Iteration: 24 / 40 [ 60%] (Sampling) Chain 3: Iteration: 28 / 40 [ 70%] (Sampling) Chain 3: Iteration: 32 / 40 [ 80%] (Sampling) Chain 3: Iteration: 36 / 40 [ 90%] (Sampling) Chain 3: Iteration: 40 / 40 [100%] (Sampling) Chain 3: Chain 3: Elapsed Time: 0.03 seconds (Warm-up) Chain 3: 0.029 seconds (Sampling) Chain 3: 0.059 seconds (Total) Chain 3: SAMPLING FOR MODEL 'nse' NOW (CHAIN 4). Chain 4: Chain 4: Gradient evaluation took 1.3e-05 seconds Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.13 seconds. Chain 4: Adjust your expectations accordingly! Chain 4: Chain 4: Chain 4: WARNING: There aren't enough warmup iterations to fit the Chain 4: three stages of adaptation as currently configured. Chain 4: Reducing each adaptation stage to 15%/75%/10% of Chain 4: the given number of warmup iterations: Chain 4: init_buffer = 3 Chain 4: adapt_window = 15 Chain 4: term_buffer = 2 Chain 4: Chain 4: Iteration: 1 / 40 [ 2%] (Warmup) Chain 4: Iteration: 4 / 40 [ 10%] (Warmup) Chain 4: Iteration: 8 / 40 [ 20%] (Warmup) Chain 4: Iteration: 12 / 40 [ 30%] (Warmup) Chain 4: Iteration: 16 / 40 [ 40%] (Warmup) Chain 4: Iteration: 20 / 40 [ 50%] (Warmup) Chain 4: Iteration: 21 / 40 [ 52%] (Sampling) Chain 4: Iteration: 24 / 40 [ 60%] (Sampling) Chain 4: Iteration: 28 / 40 [ 70%] (Sampling) Chain 4: Iteration: 32 / 40 [ 80%] (Sampling) Chain 4: Iteration: 36 / 40 [ 90%] (Sampling) Chain 4: Iteration: 40 / 40 [100%] (Sampling) Chain 4: Chain 4: Elapsed Time: 0.027 seconds (Warm-up) Chain 4: 0.029 seconds (Sampling) Chain 4: 0.056 seconds (Total) Chain 4: [ FAIL 0 | WARN 15 | SKIP 0 | PASS 53 ] [ FAIL 0 | WARN 15 | SKIP 0 | PASS 53 ] > ##test_dir("./") > ##test_package("beanz"); > > proc.time() user system elapsed 24.32 0.71 25.12