* using log directory ‘/srv/hornik/tmp/CRAN_pretest/bdc.Rcheck’
* using R Under development (unstable) (2024-11-27 r87386)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.1 (1)
    Debian flang-new version 19.1.1 (1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘bdc/DESCRIPTION’ ... OK
* this is package ‘bdc’ version ‘1.1.5’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [5s/7s] NOTE
Maintainer: ‘Bruno Ribeiro <ribeiro.brr@gmail.com>’

Package has a VignetteBuilder field but no prebuilt vignette index.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘bdc’ can be installed ... [13s/13s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [4s/4s] OK
* checking whether the package can be loaded with stated dependencies ... [4s/4s] OK
* checking whether the package can be unloaded cleanly ... [4s/4s] OK
* checking whether the namespace can be loaded with stated dependencies ... [4s/4s] OK
* checking whether the namespace can be unloaded cleanly ... [4s/4s] OK
* checking loading without being on the library search path ... [4s/4s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [19s/19s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... WARNING
Files in the 'vignettes' directory but no files in 'inst/doc':
  ‘articles/integrate_datasets.Rmd’ ‘articles/prefilter.Rmd’
  ‘articles/space.Rmd’ ‘articles/taxonomy.Rmd’ ‘articles/time.Rmd’
  ‘help/installing_gnparser.Rmd’
  ‘images/map_summary_space_vignette.png’
  ‘images/prefilter_.coordinates_country_inconsistent_MAP.png’
  ‘images/prefilter_summary_all_tests_BAR.png’
  ‘images/space_.rou_BAR.png’ ‘images/space_.urb_MAP.png’
  ‘images/space_summary_all_tests_BAR.png’
  ‘images/time_.eventDate_empty_BAR.png’ ‘images/time_.summary_BAR.png’
  ‘images/time_summary_all_tests_BAR.png’ ‘images/time_year_BAR.png’
* checking examples ... [7s/7s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [8s/8s] ERROR
  Running ‘testthat.R’ [8s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(bdc)
  > 
  > test_check("bdc")
  
  bdc_basisOfRecords_notStandard:
  Flagged 4 of the following specific nature:
   c("FOSSIL_SPECIMEN", NA, "Specimen", "PRESERVED_SPECIMEN") 
  One column was added to the database.
  
  
  bdc_basisOfRecords_notStandard:
  Flagged 2 of the following specific nature:
   c("FOSSIL_SPECIMEN", "RON") 
  One column was added to the database.
  
  Loading required package: rnaturalearth
  Spherical geometry (s2) switched off
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  
  bdc_coordinates_empty:
  Flagged 4 records.
  One column was added to the database.
  
  
  bdc_coordinates_empty:
  Flagged 4 records.
  One column was added to the database.
  
  
  bdc_coordinates_empty:
  Flagged 4 records.
  One column was added to the database.
  
  
  bdc_coordinates_from_locality 
  Found 3 records missing or with invalid coordinates but with potentially useful information on locality.
  
  
  bdc_coordinates_outOfRange:
  Flagged 2 records.
  One column was added to the database.
  
  bdc_coordinates_precision:
  Flagged 4 records
  One column was added to the database.
  
  bdc_coordinates_precision:
  Flagged 0 records
  One column was added to the database.
  
  Loading required package: readr
  
  Attaching package: 'readr'
  
  The following objects are masked from 'package:testthat':
  
      edition_get, local_edition
  
  Loading required package: rnaturalearthdata
  
  Attaching package: 'rnaturalearthdata'
  
  The following object is masked from 'package:rnaturalearth':
  
      countries110
  
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  
  bdc_scientificName_empty:
  Flagged 5 records.
  One column was added to the database.
  
  
  bdc_coordinates_empty:
  Flagged 44 records.
  One column was added to the database.
  
  
  bdc_coordinates_outOfRange:
  Flagged 1 records.
  One column was added to the database.
  
  
  bdc_basisOfRecords_notStandard:
  Flagged 0 of the following specific nature:
   character(0) 
  One column was added to the database.
  
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  Loading auxiliary data: country names
  
  Standardizing country names
  
  country found: Bolivia
  country found: Brazil
  
  bdc_country_standardized:
  The country names of 3 records were standardized.
  Two columns ('country_suggested' and 'countryCode') were added to the database.
  
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  Loading required package: cowplot
  Loading required package: DT
  
  bdc_eventDate_empty:
  Flagged 3 records.
  One column was added to the database.
  
  
  bdc_fiter_out_flags:
  The following columns were removed from the database:
  .bdc_scientificName_empty, .bdc_coordinates_empty, .bdc_coordinates_outOfRange, .summary
  
  bdc_fiter_out_flags:
  The following columns were removed from the database:
  .summary
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  
  bdc_coordinates_empty:
  Flagged 0 records.
  One column was added to the database.
  
  Loading required package: ggplot2
  
  bdc_scientificName_empty:
  Flagged 2 records.
  One column was added to the database.
  
  
  bdc_scientificName_empty:
  Flagged 2 records.
  One column was added to the database.
  
  The rnaturalearthhires package needs to be installed.
  Installing the rnaturalearthhires package.
  Standardizing datafake1 file
  Standardizing datafake2 file
  Standardizing datafake3 file
  Standardizing datafake1 file
  Standardizing datafake2 file
  Standardizing datafake3 file
  [ERROR]: Column names defined in the metadata do not match column names in the datafake4 file
  [INFO]: Column(s) `y` and `notes` defined in the metadata not present in the datafake4
  
  bdc_summary_col:
  Flagged 4 records.
  One column was added to the database.
  
  
  bdc_year_from_eventDate:
  Four-digit year were extracted from 5 records.
  
  
  bdc_year_outOfRange:
  Flagged 1 records.
  One column was added to the database.
  
  [ FAIL 11 | WARN 0 | SKIP 5 | PASS 67 ]
  
  ══ Skipped tests (5) ═══════════════════════════════════════════════════════════
  • On CRAN (5): 'test-bdc_clean_names.R:2:1', 'test-bdc_filter_name.R:2:1',
    'test-bdc_query_names_taxadb.R:2:1', 'test-bdc_standardize_datasets.R:180:1',
    'test-bdc_suggest_names_taxadb.R:2:1'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-bdc_coordinates_country_inconsistent.R:5:1'): (code run outside of `test_that()`) ──
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─bdc::bdc_coordinates_country_inconsistent(...) at test-bdc_coordinates_country_inconsistent.R:5:1
    2. │ ├─... %>% bdc_reword_countries()
    3. │ └─rnaturalearth::ne_countries(...)
    4. │   └─rnaturalearth:::get_data(scale = scale, type = type)
    5. │     └─rnaturalearth::check_rnaturalearthhires()
    6. │       └─rnaturalearth::install_rnaturalearthhires()
    7. │         └─base::tryCatch(...)
    8. │           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
    9. │             ├─base (local) tryCatchOne(...)
   10. │             │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   11. │             └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   12. │               └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   13. │                 └─value[[3L]](cond)
   14. ├─bdc:::bdc_reword_countries(.)
   15. │ └─data %>% ...
   16. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  ── Error ('test-bdc_coordinates_transposed.R:21:3'): test based on function example dataset ──
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─bdc::bdc_coordinates_transposed(...) at test-bdc_coordinates_transposed.R:21:3
    2. │ └─bdc:::bdc_get_world_map()
    3. │   ├─base::suppressWarnings(...)
    4. │   │ └─base::withCallingHandlers(...)
    5. │   ├─... %>% sf::as_Spatial()
    6. │   └─rnaturalearth::ne_countries(scale = "large", returnclass = "sf")
    7. │     └─rnaturalearth:::get_data(scale = scale, type = type)
    8. │       └─rnaturalearth::check_rnaturalearthhires()
    9. │         └─rnaturalearth::install_rnaturalearthhires()
   10. │           └─base::tryCatch(...)
   11. │             └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   12. │               ├─base (local) tryCatchOne(...)
   13. │               │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   14. │               └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   15. │                 └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   16. │                   └─value[[3L]](cond)
   17. ├─sf::as_Spatial(.)
   18. ├─dplyr::select(., name_long, iso2c, geometry)
   19. ├─dplyr::mutate(...)
   20. ├─dplyr::left_join(., cntr_names, by = c(name_long = "english_name"))
   21. ├─bdc:::bdc_reword_countries(.)
   22. │ └─data %>% ...
   23. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  ── Error ('test-bdc_coordinates_transposed.R:92:1'): (code run outside of `test_that()`) ──
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─bdc::bdc_country_from_coordinates(...) at test-bdc_coordinates_transposed.R:92:1
    2. │ ├─... %>% bdc_reword_countries()
    3. │ └─rnaturalearth::ne_countries(scale = "large", returnclass = "sf")
    4. │   └─rnaturalearth:::get_data(scale = scale, type = type)
    5. │     └─rnaturalearth::check_rnaturalearthhires()
    6. │       └─rnaturalearth::install_rnaturalearthhires()
    7. │         └─base::tryCatch(...)
    8. │           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
    9. │             ├─base (local) tryCatchOne(...)
   10. │             │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   11. │             └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   12. │               └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   13. │                 └─value[[3L]](cond)
   14. ├─bdc:::bdc_reword_countries(.)
   15. │ └─data %>% ...
   16. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  ── Error ('test-bdc_correct_coordinates.R:25:1'): (code run outside of `test_that()`) ──
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─bdc:::bdc_get_world_map() at test-bdc_correct_coordinates.R:25:1
    2. │ ├─base::suppressWarnings(...)
    3. │ │ └─base::withCallingHandlers(...)
    4. │ ├─... %>% sf::as_Spatial()
    5. │ └─rnaturalearth::ne_countries(scale = "large", returnclass = "sf")
    6. │   └─rnaturalearth:::get_data(scale = scale, type = type)
    7. │     └─rnaturalearth::check_rnaturalearthhires()
    8. │       └─rnaturalearth::install_rnaturalearthhires()
    9. │         └─base::tryCatch(...)
   10. │           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   11. │             ├─base (local) tryCatchOne(...)
   12. │             │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   13. │             └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   14. │               └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   15. │                 └─value[[3L]](cond)
   16. ├─sf::as_Spatial(.)
   17. ├─dplyr::select(., name_long, iso2c, geometry)
   18. ├─dplyr::mutate(...)
   19. ├─dplyr::left_join(., cntr_names, by = c(name_long = "english_name"))
   20. ├─bdc:::bdc_reword_countries(.)
   21. │ └─data %>% ...
   22. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  ── Error ('test-bdc_country_from_coordinates.R:9:3'): it can return country names ──
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─bdc::bdc_country_from_coordinates(...) at test-bdc_country_from_coordinates.R:9:3
    2. │ ├─... %>% bdc_reword_countries()
    3. │ └─rnaturalearth::ne_countries(scale = "large", returnclass = "sf")
    4. │   └─rnaturalearth:::get_data(scale = scale, type = type)
    5. │     └─rnaturalearth::check_rnaturalearthhires()
    6. │       └─rnaturalearth::install_rnaturalearthhires()
    7. │         └─base::tryCatch(...)
    8. │           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
    9. │             ├─base (local) tryCatchOne(...)
   10. │             │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   11. │             └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   12. │               └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   13. │                 └─value[[3L]](cond)
   14. ├─bdc:::bdc_reword_countries(.)
   15. │ └─data %>% ...
   16. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  ── Error ('test-bdc_country_from_coordinates.R:31:3'): return message ──────────
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─testthat::expect_message(...) at test-bdc_country_from_coordinates.R:31:3
    2. │ └─testthat:::expect_condition_matching(...)
    3. │   └─testthat:::quasi_capture(...)
    4. │     ├─testthat (local) .capture(...)
    5. │     │ └─base::withCallingHandlers(...)
    6. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
    7. ├─bdc::bdc_country_from_coordinates(...)
    8. │ ├─... %>% bdc_reword_countries()
    9. │ └─rnaturalearth::ne_countries(scale = "large", returnclass = "sf")
   10. │   └─rnaturalearth:::get_data(scale = scale, type = type)
   11. │     └─rnaturalearth::check_rnaturalearthhires()
   12. │       └─rnaturalearth::install_rnaturalearthhires()
   13. │         └─base::tryCatch(...)
   14. │           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   15. │             ├─base (local) tryCatchOne(...)
   16. │             │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   17. │             └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   18. │               └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   19. │                 └─value[[3L]](cond)
   20. ├─bdc:::bdc_reword_countries(.)
   21. │ └─data %>% ...
   22. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  ── Error ('test-bdc_country_from_coordinates.R:46:3'): return country names when all contry names is missing ──
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─testthat::expect_message(...) at test-bdc_country_from_coordinates.R:46:3
    2. │ └─testthat:::expect_condition_matching(...)
    3. │   └─testthat:::quasi_capture(...)
    4. │     ├─testthat (local) .capture(...)
    5. │     │ └─base::withCallingHandlers(...)
    6. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
    7. ├─bdc::bdc_country_from_coordinates(...)
    8. │ ├─... %>% bdc_reword_countries()
    9. │ └─rnaturalearth::ne_countries(scale = "large", returnclass = "sf")
   10. │   └─rnaturalearth:::get_data(scale = scale, type = type)
   11. │     └─rnaturalearth::check_rnaturalearthhires()
   12. │       └─rnaturalearth::install_rnaturalearthhires()
   13. │         └─base::tryCatch(...)
   14. │           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   15. │             ├─base (local) tryCatchOne(...)
   16. │             │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   17. │             └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   18. │               └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   19. │                 └─value[[3L]](cond)
   20. ├─bdc:::bdc_reword_countries(.)
   21. │ └─data %>% ...
   22. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  ── Error ('test-bdc_country_from_coordinates.R:69:1'): (code run outside of `test_that()`) ──
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─bdc::bdc_country_from_coordinates(data) at test-bdc_country_from_coordinates.R:69:1
    2. │ ├─... %>% bdc_reword_countries()
    3. │ └─rnaturalearth::ne_countries(scale = "large", returnclass = "sf")
    4. │   └─rnaturalearth:::get_data(scale = scale, type = type)
    5. │     └─rnaturalearth::check_rnaturalearthhires()
    6. │       └─rnaturalearth::install_rnaturalearthhires()
    7. │         └─base::tryCatch(...)
    8. │           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
    9. │             ├─base (local) tryCatchOne(...)
   10. │             │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   11. │             └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   12. │               └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   13. │                 └─value[[3L]](cond)
   14. ├─bdc:::bdc_reword_countries(.)
   15. │ └─data %>% ...
   16. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  ── Error ('test-bdc_create_figures.R:21:1'): (code run outside of `test_that()`) ──
  Error: Package `rworldmap` needed for this function to work! Please, install it with: `install.packages("rworldmap")`
  Backtrace:
      ▆
   1. └─bdc::bdc_create_figures(...) at test-bdc_create_figures.R:21:1
   2.   ├─base::suppressWarnings(...)
   3.   │ └─base::withCallingHandlers(...)
   4.   └─bdc:::check_require_cran("rworldmap")
  ── Error ('test-bdc_get_world_map.R:3:1'): (code run outside of `test_that()`) ──
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─bdc:::bdc_get_world_map() at test-bdc_get_world_map.R:3:1
    2. │ ├─base::suppressWarnings(...)
    3. │ │ └─base::withCallingHandlers(...)
    4. │ ├─... %>% sf::as_Spatial()
    5. │ └─rnaturalearth::ne_countries(scale = "large", returnclass = "sf")
    6. │   └─rnaturalearth:::get_data(scale = scale, type = type)
    7. │     └─rnaturalearth::check_rnaturalearthhires()
    8. │       └─rnaturalearth::install_rnaturalearthhires()
    9. │         └─base::tryCatch(...)
   10. │           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   11. │             ├─base (local) tryCatchOne(...)
   12. │             │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   13. │             └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   14. │               └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   15. │                 └─value[[3L]](cond)
   16. ├─sf::as_Spatial(.)
   17. ├─dplyr::select(., name_long, iso2c, geometry)
   18. ├─dplyr::mutate(...)
   19. ├─dplyr::left_join(., cntr_names, by = c(name_long = "english_name"))
   20. ├─bdc:::bdc_reword_countries(.)
   21. │ └─data %>% ...
   22. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  ── Error ('test-bdc_standardize_country.R:6:1'): (code run outside of `test_that()`) ──
  Error in `value[[3L]](cond)`: Failed to install the rnaturalearthhires package.
    Please try installing the package for yourself using the following command: 
       devtools::install_github("ropensci/rnaturalearthhires")
  Backtrace:
       ▆
    1. ├─bdc:::bdc_get_world_map() at test-bdc_standardize_country.R:6:1
    2. │ ├─base::suppressWarnings(...)
    3. │ │ └─base::withCallingHandlers(...)
    4. │ ├─... %>% sf::as_Spatial()
    5. │ └─rnaturalearth::ne_countries(scale = "large", returnclass = "sf")
    6. │   └─rnaturalearth:::get_data(scale = scale, type = type)
    7. │     └─rnaturalearth::check_rnaturalearthhires()
    8. │       └─rnaturalearth::install_rnaturalearthhires()
    9. │         └─base::tryCatch(...)
   10. │           └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   11. │             ├─base (local) tryCatchOne(...)
   12. │             │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   13. │             └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
   14. │               └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   15. │                 └─value[[3L]](cond)
   16. ├─sf::as_Spatial(.)
   17. ├─dplyr::select(., name_long, iso2c, geometry)
   18. ├─dplyr::mutate(...)
   19. ├─dplyr::left_join(., cntr_names, by = c(name_long = "english_name"))
   20. ├─bdc:::bdc_reword_countries(.)
   21. │ └─data %>% ...
   22. └─dplyr::mutate(., name_long = dplyr::recode(name_long, !!!vec_reword))
  
  [ FAIL 11 | WARN 0 | SKIP 5 | PASS 67 ]
  Error: Test failures
  Execution halted
* checking package vignettes ... NOTE
Package has ‘vignettes’ subdirectory but apparently no vignettes.
Perhaps the ‘VignetteBuilder’ information is missing from the
DESCRIPTION file?
* checking PDF version of manual ... [3s/3s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR, 1 WARNING, 2 NOTEs