* installing *source* package ‘bcf’ ... ** using staged installation ** libs using C++ compiler: ‘Debian clang version 16.0.6 (15)’ clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -fpic -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -fpic -g -O3 -Wall -pedantic -c TreeSamples.cpp -o TreeSamples.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -fpic -g -O3 -Wall -pedantic -c bcf_clean.cpp -o bcf_clean.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -fpic -g -O3 -Wall -pedantic -c bcf_clean_overpar.cpp -o bcf_clean_overpar.o bcf_clean_overpar.cpp:106:3: warning: '/*' within block comment [-Wcomment] /* Read, format y ^ bcf_clean_overpar.cpp:126:3: warning: '/*' within block comment [-Wcomment] /* Read, format weights ^ bcf_clean_overpar.cpp:137:3: warning: '/*' within block comment [-Wcomment] /* Read, format X_con ^ bcf_clean_overpar.cpp:162:3: warning: '/*' within block comment [-Wcomment] /* Read, format X_mod ^ bcf_clean_overpar.cpp:193:3: warning: '/*' within block comment [-Wcomment] /* Setup the model ^ 5 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -fpic -g -O3 -Wall -pedantic -c bd.cpp -o bd.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -fpic -g -O3 -Wall -pedantic -c funs.cpp -o funs.o funs.cpp:279:16: warning: unused variable 'tbn' [-Wunused-variable] tree::tree_cp tbn; //the pointer to the bottom node for the current observations ^ funs.cpp:280:9: warning: unused variable 'ni' [-Wunused-variable] size_t ni; //the index into vector of the current bottom node ^ funs.cpp:281:10: warning: unused variable 'xx' [-Wunused-variable] double *xx; //current x ^ funs.cpp:282:9: warning: unused variable 'y' [-Wunused-variable] double y; //current y ^ funs.cpp:318:9: warning: variable 'y' set but not used [-Wunused-but-set-variable] double y; //current y ^ funs.cpp:324:7: warning: unused variable 'nb' [-Wunused-variable] bvsz nb = bnv.size(); ^ funs.cpp:351:9: warning: variable 'y' set but not used [-Wunused-but-set-variable] double y; //current y ^ funs.cpp:354:7: warning: unused variable 'nb' [-Wunused-variable] bvsz nb = bnv.size(); ^ funs.cpp:376:9: warning: variable 'y' set but not used [-Wunused-but-set-variable] double y; //current y ^ funs.cpp:404:10: warning: variable 'y' set but not used [-Wunused-but-set-variable] double y; //current y ^ 10 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -fpic -g -O3 -Wall -pedantic -c logging.cpp -o logging.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -fpic -g -O3 -Wall -pedantic -c rng.cpp -o rng.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRCPP_PARALLEL_USE_TBB=1 -fpic -g -O3 -Wall -pedantic -c tree.cpp -o tree.o tree.cpp:596:9: warning: variable 'pid' set but not used [-Wunused-but-set-variable] size_t pid; ^ tree.cpp:636:9: warning: variable 'pid' set but not used [-Wunused-but-set-variable] size_t pid; ^ 2 warnings generated. clang++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o bcf.so RcppExports.o TreeSamples.o bcf_clean.o bcf_clean_overpar.o bd.o funs.o logging.o rng.o tree.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR installing to /srv/hornik/tmp/CRAN/bcf.Rcheck/00LOCK-bcf/00new/bcf/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bcf)