R Under development (unstable) (2023-12-07 r85661 ucrt) -- "Unsuffered Consequences" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > ## try to reconstruct error reported by Hofert Jan Marius > ## (simpler version) > > Lfun <- function(x) { + (x-5)^2 + } > > > > library(bbmle) Loading required package: stats4 > > lb <- 6 > ## first try with L-BFGS-B and bounds > m1 <- mle2(Lfun,start=list(x=7),lower=6,method="L-BFGS-B") Warning message: In mle2(Lfun, start = list(x = 7), lower = 6, method = "L-BFGS-B") : some parameters are on the boundary: variance-covariance calculations based on Hessian may be unreliable > coef(m1) x 6 > p1 <- profile(m1) > plot(p1) > (c1 <- confint(m1,quietly=TRUE)) 2.5 % 97.5 % NA 6.702747 > ## all OK > > m2 <- mle2(Lfun,start=list(x=7),optimizer="optimize", + lower=lb,upper=10) > coef(m2) x 6.00006 > p2 <- profile(m2) > (c2 <- confint(m2)) 2.5 % 97.5 % NA 6.668954 > (c2 <- confint(m2)) 2.5 % 97.5 % NA 6.668954 > plot(p2,show.points=TRUE) Warning messages: 1: In .local(x, ...) : non-monotonic profile: reverting to linear interpolation. Consider setting std.err manually 2: In regularize.values(x, y, ties, missing(ties), na.rm = na.rm) : collapsing to unique 'x' values > > proc.time() user system elapsed 1.70 0.15 1.86