test_that("predict is silent", { expect_silent(predict(manec_example)) }) test_that("predict/fitted is a matrix of appropriately name elements", { if (Sys.getenv("NOT_CRAN") == "") { skip_on_cran() } pred_p <- predict(manec_example) expect_equal(class(pred_p), c("matrix", "array")) expect_equal(dim(pred_p), c(100, 4)) expect_equal(colnames(pred_p), c("Estimate", "Est.Error", "Q2.5", "Q97.5")) fitt_p <- fitted(manec_example) expect_equal(class(fitt_p), c("matrix", "array")) expect_equal(dim(fitt_p), c(100, 4)) expect_equal(colnames(fitt_p), c("Estimate", "Est.Error", "Q2.5", "Q97.5")) }) test_that("plot returns null, is invisible, and is silent", { if (Sys.getenv("NOT_CRAN") == "") { skip_on_cran() } expect_null(plot(manec_example)) expect_silent(plot(manec_example)) expect_invisible(plot(manec_example)) }) test_that("rhat behaves as expected", { if (Sys.getenv("NOT_CRAN") == "") { skip_on_cran() } rhat_p <- suppressMessages(rhat(manec_example)) rhat2_p <- rhat(manec_example, rhat_cutoff = 1) expect_message(rhat(manec_example, rhat_cutoff = 1)) expect_equal(names(rhat2_p), manec_example$success_models) expect_equal(names(rhat_p[[1]]), c("rhat_vals", "failed")) }) test_that("summary behaves as expected", { if (Sys.getenv("NOT_CRAN") == "") { skip_on_cran() } summary.p <- suppressWarnings(summary(manec_example)) expect_equal(class(summary.p), "manecsummary") expect_equal(names(summary.p), c("models", "family", "sample_size", "mod_weights", "mod_weights_method", "ecx_mods", "nec_vals", "ecs", "bayesr2", "rhat_issues")) }) test_that("formula behaves as expected", { if (Sys.getenv("NOT_CRAN") == "") { skip_on_cran() } expect_error(formula(manec_example)) expect_s3_class(formula(manec_example, "nec4param"), "bayesnecformula") expect_s3_class(formula(manec_example, model = "nec4param"), "bayesnecformula") expect_s3_class(formula(manec_example, model = "ecx4param"), "bayesnecformula") expect_null(formula(manec_example, model = "ecxlin")) }) test_that("model.frame behaves as expected", { if (Sys.getenv("NOT_CRAN") == "") { skip_on_cran() } expect_error(model.frame(manec_example)) expect_s3_class(model.frame(manec_example, "nec4param"), "data.frame") expect_s3_class(model.frame(manec_example, model = "nec4param"), "data.frame") expect_s3_class(model.frame(manec_example, model = "ecx4param"), "data.frame") expect_error(model.frame(manec_example, model = "ecxlin")) })