test_that("function can extract values for theta from LDA results", { #simulate data id<- rep(1:4, each = 250) SL<- sample(1:5, 1000, replace = T) TA<- sample(1:8, 1000, replace = T) tseg<- rep(rep(1:10, each = 25), 4) dat<- data.frame(id, tseg, SL, TA) #summarize by time segment obs<- summarize_tsegs(dat = dat, nbins = c(5,8)) #cluster data with LDA res<- cluster_segments(dat = obs, gamma1 = 0.1, alpha = 0.1, ngibbs = 250, nburn = 125, nmaxclust = 7, ndata.types = 2) #Extract proportions of behaviors per time segment theta.estim<- extract_prop(res = res, ngibbs = 250, nburn = 125, nmaxclust = 7) expect_is(theta.estim, "matrix") expect_equal(dim(theta.estim), c(40, 7)) expect_equal(sum(theta.estim[1,]), 1) expect_equal(sum(theta.estim[18,]), 1) expect_equal(sum(theta.estim[27,]), 1) })