* installing *source* package ‘batchmix’ ...
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 17.0.6 (5)’
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c RcppExports.cpp -o RcppExports.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c createSimilarityMat.cpp -o createSimilarityMat.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c genericFunctions.cpp -o genericFunctions.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c mvnPredictive.cpp -o mvnPredictive.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c mvnSampler.cpp -o mvnSampler.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c mvtPredictive.cpp -o mvtPredictive.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c mvtSampler.cpp -o mvtSampler.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c pdfs.cpp -o pdfs.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c sampleMVN.cpp -o sampleMVN.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c sampleMVT.cpp -o sampleMVT.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c sampleSemisupervisedMVN.cpp -o sampleSemisupervisedMVN.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c sampleSemisupervisedMVT.cpp -o sampleSemisupervisedMVT.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c sampler.cpp -o sampler.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c samplerFactory.cpp -o samplerFactory.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c semisupervisedSampler.cpp -o semisupervisedSampler.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c semisupervisedSamplerFactory.cpp -o semisupervisedSamplerFactory.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c test-example.cpp -o test-example.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c test-mvnKernels.cpp -o test-mvnKernels.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c test-mvtKernels.cpp -o test-mvtKernels.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c test-pdfs.cpp -o test-pdfs.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-17/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3    -fpic  -g -O3 -Wall -pedantic  -c test-runner.cpp -o test-runner.o
clang++-17 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-17/lib -Wl,-O1 -o batchmix.so RcppExports.o createSimilarityMat.o genericFunctions.o mvnPredictive.o mvnSampler.o mvtPredictive.o mvtSampler.o pdfs.o sampleMVN.o sampleMVT.o sampleSemisupervisedMVN.o sampleSemisupervisedMVT.o sampler.o samplerFactory.o semisupervisedSampler.o semisupervisedSamplerFactory.o test-example.o test-mvnKernels.o test-mvtKernels.o test-pdfs.o test-runner.o -llapack -L/home/hornik/tmp/R-d-clang-17/lib -lRblas -L/usr/lib/llvm-17/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-17/lib -lR
installing to /srv/hornik/tmp/CRAN/batchmix.Rcheck/00LOCK-batchmix/00new/batchmix/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (batchmix)