* using log directory 'd:/RCompile/CRANincoming/R-devel/basket.Rcheck' * using R Under development (unstable) (2023-09-26 r85226 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.2.0 GNU Fortran (GCC) 12.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'basket/DESCRIPTION' ... OK * this is package 'basket' version '0.12.2' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [15s] NOTE Maintainer: 'Michael J. Kane ' Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Found the following (possibly) invalid URLs: URL: https://codecov.io/github/kaneplusplus/basket?branch=master (moved to https://app.codecov.io/github/kaneplusplus/basket?branch=master) From: README.md Status: 301 Message: Moved Permanently URL: https://travis-ci.org/kaneplusplus/basket (moved to https://app.travis-ci.com/kaneplusplus/basket) From: README.md Status: 301 Message: Moved Permanently URL: https://www.nejm.org/doi/full/10.1056/NEJMoa1502309 From: inst/doc/using-the-basket-package.html Status: 403 Message: Forbidden For content that is 'Moved Permanently', please change http to https, add trailing slashes, or replace the old by the new URL. Found the following (possibly) invalid file URI: URI: CONDUCT.md From: README.md * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'basket' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... NOTE Apparent methods for exported generics not registered: plot_pep.default sample_posterior.default sample_posterior.mem See section 'Registering S3 methods' in the 'Writing R Extensions' manual. * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK Running 'testthat.R' * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... [13s] OK * checking HTML version of manual ... OK * DONE Status: 2 NOTEs